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FFCP PHASE1:Mm9::chr4:83131690..83131728,-: Difference between revisions

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{{FFCP|EntrezGene=101739|HGNC=|MCL_coexpression_id=60|UniProt=F6RB63|association_with_transcript=353bp_to_ENSMUST00000130626_5end|description=CAGE_peak_4_at_Psip1_5end|id=chr4:83131690..83131728,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.59e-15!71;UBERON:0003075!3.59e-15!71;UBERON:0007284!3.59e-15!71;UBERON:0000033!1.00e-14!63;UBERON:0003056!1.33e-13!49;UBERON:0007811!4.57e-13!86;UBERON:0000955!1.60e-12!50;UBERON:0006238!1.60e-12!50;UBERON:0000153!3.40e-12!94;UBERON:0002616!4.08e-12!49;UBERON:0001049!9.19e-12!52;UBERON:0005068!9.19e-12!52;UBERON:0006241!9.19e-12!52;UBERON:0007135!9.19e-12!52;UBERON:0001017!1.88e-11!73;UBERON:0005743!1.88e-11!73;UBERON:0000073!1.06e-10!75;UBERON:0001016!1.06e-10!75;UBERON:0004121!2.56e-10!102;UBERON:0000924!2.56e-10!102;UBERON:0006601!2.56e-10!102;UBERON:0003080!1.34e-09!40;UBERON:0002780!3.66e-09!39;UBERON:0001890!3.66e-09!39;UBERON:0006240!3.66e-09!39;UBERON:0002020!4.20e-08!34;UBERON:0002791!1.84e-07!29;UBERON:0003528!1.84e-07!29;UBERON:0001893!1.84e-07!29;UBERON:0002021!2.79e-07!10;UBERON:0000411!2.79e-07!10;UBERON:0001950!2.79e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.95e-22,64;UBERON:0003075,4.95e-22,64;UBERON:0007284,4.95e-22,64;UBERON:0003056,5.49e-19,49;UBERON:0010371,1.91e-17,73;UBERON:0010314,3.34e-17,92;UBERON:0000073,1.29e-16,54;UBERON:0004121,5.68e-16,95;UBERON:0000924,5.68e-16,95;UBERON:0006601,5.68e-16,95;UBERON:0000955,3.26e-15,47;UBERON:0006238,3.26e-15,47;UBERON:0001017,5.46e-15,73;UBERON:0001049,5.93e-15,52;UBERON:0005068,5.93e-15,52;UBERON:0006241,5.93e-15,52;UBERON:0007135,5.93e-15,52;UBERON:0002616,1.37e-14,46;UBERON:0001016,3.20e-14,75;UBERON:0003080,1.41e-12,40;UBERON:0002780,6.79e-12,39;UBERON:0001890,6.79e-12,39;UBERON:0006240,6.79e-12,39;UBERON:0002021,5.10e-11,10;UBERON:0000411,5.10e-11,10;UBERON:0001950,5.10e-11,10;UBERON:0003528,6.80e-11,29;UBERON:0002791,6.80e-11,29;UBERON:0001893,6.80e-11,29;UBERON:0002020,1.80e-10,34;UBERON:0000956,4.38e-09,21;UBERON:0001869,4.38e-09,21;UBERON:0000203,4.38e-09,21;UBERON:0000970,4.16e-08,9;UBERON:0000019,4.16e-08,9;UBERON:0000047,4.16e-08,9;UBERON:0010312,4.16e-08,9;UBERON:0004088,4.16e-08,9;UBERON:0002104,4.16e-08,9;UBERON:0001456,4.16e-08,9;UBERON:0003072,4.16e-08,9;UBERON:0004128,4.16e-08,9;UBERON:0003071,4.16e-08,9;UBERON:0002619,6.67e-08,17|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.387369970324729,0.281577444303333,0,0,0.159544317990673,0.342401459862411,0.437102012094987,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,2.12608225377674,0.397163804803541,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0,0,0.436050312760893,0,0.58328969722285,0.279972843250725,0,0,0,1.00828139742739,0.771778308107841,0.85960031981627,0.515672092277442,0.606949382578793,0,0,0,0,0,0,0,0,0,1.34796496001021,1.35005938331691,0.210324961351382,0.856952953211411,0.441737081903227,0.734944795289724,0.766763768145891,0,2.20231761998777,4.08599481872601,1.84327839907492,0.527545150920775,1.09785172322892,0,1.11673199600552,1.12552522006336,1.98637722109853,1.17851434189467,3.55929201997757,0.559198337475902,0.37863096666592,0,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.68510327831436,1.55362730188303,0.445326417194474,0.346970653532272,0.304465478312141,0,1.05505848386836,1.05829836422134,0.251333182659351,0,0,0,0.485300549842228,0.441683036920787,0.484875253135222,0,2.04946557908083,4.60782754989601,0,0.11981512450592,0,0.127070227073065,1.9472783122627,1.37250180845588,1.88481528169297,3.30266208365325,3.58001640262463,2.28566849015516,2.59586020908412,0.509196819251581,0.497627882440372,0.505445516867349,0.210441855886474,2.86264974517948,3.67843367093557,11.5239763075424,11.1521565198429,8.57259889306731,5.89323113310309,2.90475346135159,1.55222022443409,0.431135985865684,0.945530400839096,1.58356011747554,0,0.556094498451196,0,0,0.398068533636986,0,0,0.284163499395593,0.621377317606506,1.64168241986767,1.2604344302271,0,0.983821158737019,1.3884040159864,2.09280550275367,1.3413670069981,1.16765342367169,0.493679549740441,0.820837320395476,0.162137619091711,0.146199987425332,0.658650345873152,0.134206418760372,5.25724871410318,1.9551876352064,0,0,1.70630600428187,0.464473343720877,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0.948339504765408,1.14248512609729,1.1270773567308,1.4255592949172,0.581857461502877,0.701358198903186,0.252946148497029,0.442830443938806,0.31399745568275,0.370191491765402,0.296452627087149,0.333690211432188,0.786235980452812,0.224862112384854,0.202860121388503,0.482354319504834,0.25462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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=101739
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=F6RB63
|association_with_transcript=353bp_to_ENSMUST00000130626_5end
|cluster_id=chr4:83131690..83131728,-
|description=CAGE_peak_4_at_Psip1_5end
|id=chr4:83131690..83131728,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.59e-15!71;UBERON:0003075!3.59e-15!71;UBERON:0007284!3.59e-15!71;UBERON:0000033!1.00e-14!63;UBERON:0003056!1.33e-13!49;UBERON:0007811!4.57e-13!86;UBERON:0000955!1.60e-12!50;UBERON:0006238!1.60e-12!50;UBERON:0000153!3.40e-12!94;UBERON:0002616!4.08e-12!49;UBERON:0001049!9.19e-12!52;UBERON:0005068!9.19e-12!52;UBERON:0006241!9.19e-12!52;UBERON:0007135!9.19e-12!52;UBERON:0001017!1.88e-11!73;UBERON:0005743!1.88e-11!73;UBERON:0000073!1.06e-10!75;UBERON:0001016!1.06e-10!75;UBERON:0004121!2.56e-10!102;UBERON:0000924!2.56e-10!102;UBERON:0006601!2.56e-10!102;UBERON:0003080!1.34e-09!40;UBERON:0002780!3.66e-09!39;UBERON:0001890!3.66e-09!39;UBERON:0006240!3.66e-09!39;UBERON:0002020!4.20e-08!34;UBERON:0002791!1.84e-07!29;UBERON:0003528!1.84e-07!29;UBERON:0001893!1.84e-07!29;UBERON:0002021!2.79e-07!10;UBERON:0000411!2.79e-07!10;UBERON:0001950!2.79e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.95e-22,64;UBERON:0003075,4.95e-22,64;UBERON:0007284,4.95e-22,64;UBERON:0003056,5.49e-19,49;UBERON:0010371,1.91e-17,73;UBERON:0010314,3.34e-17,92;UBERON:0000073,1.29e-16,54;UBERON:0004121,5.68e-16,95;UBERON:0000924,5.68e-16,95;UBERON:0006601,5.68e-16,95;UBERON:0000955,3.26e-15,47;UBERON:0006238,3.26e-15,47;UBERON:0001017,5.46e-15,73;UBERON:0001049,5.93e-15,52;UBERON:0005068,5.93e-15,52;UBERON:0006241,5.93e-15,52;UBERON:0007135,5.93e-15,52;UBERON:0002616,1.37e-14,46;UBERON:0001016,3.20e-14,75;UBERON:0003080,1.41e-12,40;UBERON:0002780,6.79e-12,39;UBERON:0001890,6.79e-12,39;UBERON:0006240,6.79e-12,39;UBERON:0002021,5.10e-11,10;UBERON:0000411,5.10e-11,10;UBERON:0001950,5.10e-11,10;UBERON:0003528,6.80e-11,29;UBERON:0002791,6.80e-11,29;UBERON:0001893,6.80e-11,29;UBERON:0002020,1.80e-10,34;UBERON:0000956,4.38e-09,21;UBERON:0001869,4.38e-09,21;UBERON:0000203,4.38e-09,21;UBERON:0000970,4.16e-08,9;UBERON:0000019,4.16e-08,9;UBERON:0000047,4.16e-08,9;UBERON:0010312,4.16e-08,9;UBERON:0004088,4.16e-08,9;UBERON:0002104,4.16e-08,9;UBERON:0001456,4.16e-08,9;UBERON:0003072,4.16e-08,9;UBERON:0004128,4.16e-08,9;UBERON:0003071,4.16e-08,9;UBERON:0002619,6.67e-08,17
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.387369970324729,0.281577444303333,0,0,0.159544317990673,0.342401459862411,0.437102012094987,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,2.12608225377674,0.397163804803541,0.261199789138935,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0,0,0.436050312760893,0,0.58328969722285,0.279972843250725,0,0,0,1.00828139742739,0.771778308107841,0.85960031981627,0.515672092277442,0.606949382578793,0,0,0,0,0,0,0,0,0,1.34796496001021,1.35005938331691,0.210324961351382,0.856952953211411,0.441737081903227,0.734944795289724,0.766763768145891,0,2.20231761998777,4.08599481872601,1.84327839907492,0.527545150920775,1.09785172322892,0,1.11673199600552,1.12552522006336,1.98637722109853,1.17851434189467,3.55929201997757,0.559198337475902,0.37863096666592,0,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.68510327831436,1.55362730188303,0.445326417194474,0.346970653532272,0.304465478312141,0,1.05505848386836,1.05829836422134,0.251333182659351,0,0,0,0.485300549842228,0.441683036920787,0.484875253135222,0,2.04946557908083,4.60782754989601,0,0.11981512450592,0,0.127070227073065,1.9472783122627,1.37250180845588,1.88481528169297,3.30266208365325,3.58001640262463,2.28566849015516,2.59586020908412,0.509196819251581,0.497627882440372,0.505445516867349,0.210441855886474,2.86264974517948,3.67843367093557,11.5239763075424,11.1521565198429,8.57259889306731,5.89323113310309,2.90475346135159,1.55222022443409,0.431135985865684,0.945530400839096,1.58356011747554,0,0.556094498451196,0,0,0.398068533636986,0,0,0.284163499395593,0.621377317606506,1.64168241986767,1.2604344302271,0,0.983821158737019,1.3884040159864,2.09280550275367,1.3413670069981,1.16765342367169,0.493679549740441,0.820837320395476,0.162137619091711,0.146199987425332,0.658650345873152,0.134206418760372,5.25724871410318,1.9551876352064,0,0,1.70630600428187,0.464473343720877,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0.948339504765408,1.14248512609729,1.1270773567308,1.4255592949172,0.581857461502877,0.701358198903186,0.252946148497029,0.442830443938806,0.31399745568275,0.370191491765402,0.296452627087149,0.333690211432188,0.786235980452812,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0,1.13494658742525,0.823684239564244,11.5014565221884,0,0,0,0.358794827043824,0.964887042726734,0.369506380333209,0.189491411770485,0.162964976442026,1.35796068620151,0.704070744865506,0.167506257441816,0.238043640886014,0.195133647857799,0.945810864637146,0.664394068946325,0.637819074629948,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,2.0871576698413,2.57865710502847,0.819674726883377,0,0.631016438832513,1.17131623288992,1.50796378412959,1.91175038362042,0.668396022247182,1.13230612315533,0.809621403349789,1.16902343164525,0.790575555893047,1.60660658210904,0,0.178065603667255,0.651547837414304,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0.754420319023592,0,0,0,0,0,0,1.05418608574999,0,1.02131881726136,1.44048875225048,0.517434735131018,1.07168517515796,0.886701168211368,1.24858172321449,0.658196082408484,0.304464949114599,1.87737366450968,0.63549621259146,0.441056796109924,0.32977250588296,0.968786560175433,0.361877549568935,0.119372344003136,0.164140899745061,0,1.66882771809459,1.02522528478712,0.82554747185289,0.370389054739423,0.565105371014073,1.50363650493128,1.14389086603261,0.339956859987711,0.419854356970974,0.414599921413271,0.954670618015114,0.790839983952838,0.203319467126849,0.432021363287205,0.209088296014469,0,0.539457385539283,0.247960367176008,0,0,0.621339313086926,6.76431526421028,1.64468200648377,0.330916980914195,0.972255941720238,0.645799117388655,2.87225413334323,2.22978753426933,1.69265700297135,0.943734099831398,4.1069300540421,3.16833006883652,0.632022241256357,0.405450430580328,1.23253148597793,1.81889152168913,1.25318686967237,0.79472541912506,1.9231271923195,0.590758108698309,1.31256384932592,0.914481679859998,1.71404514732629,1.46186821109629,0.865906574762965,0.467507608726276,0,0.221985953374065,0.897138566094757,1.34307693091263,0.19318959403219,0,0.36630324853453,0,0.501572104035363,4.51801474093653,5.06357760157895,2.29158205375759,3.26521046453006,4.7955776383945,3.0215755895588,3.37511250115903,4.05289082901798,3.62513927187364,1.55328093525546,1.03787347584177,1.99512436700516,0.853668028770671,0.729320151204882,0.209613162627982,0.919217542250071,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,1.01391719956096,0.565879024158229,0.749132059759059,0.320125762024346,0.574354689556133,0,0.695305955669133,0.578727661391115,0,0.441596760403192,0.342869252385415,0.887379030796687,1.43061713968393,0.581385666529314,0.658765662907314,0.169229215783353,0.548783918618318,0.789209134313529,0.543216455383447,1.68342681497322,0.711810108745045,0.985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0,0.429742108096597,0.765153328275374,0.441182838239031,0.927471342481686
|short_description=p4@Psip1
}}

Latest revision as of 06:03, 27 September 2015

Short description:p4@Psip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Psip1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 353bp_to_ENSMUST00000130626_5end
EntrezGene:Psip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Psip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C911.52
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C68.57
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.95e-2264
neural plate4.95e-2264
presumptive neural plate4.95e-2264
pre-chordal neural plate5.49e-1949
ecto-epithelium1.91e-1773
structure with developmental contribution from neural crest3.34e-1792
regional part of nervous system1.29e-1654
ectoderm-derived structure5.68e-1695
ectoderm5.68e-1695
presumptive ectoderm5.68e-1695
brain3.26e-1547
future brain3.26e-1547
central nervous system5.46e-1573
neural tube5.93e-1552
neural rod5.93e-1552
future spinal cord5.93e-1552
neural keel5.93e-1552
regional part of brain1.37e-1446
nervous system3.20e-1475
anterior neural tube1.41e-1240
regional part of forebrain6.79e-1239
forebrain6.79e-1239
future forebrain6.79e-1239
occipital lobe5.10e-1110
visual cortex5.10e-1110
neocortex5.10e-1110
brain grey matter6.80e-1129
regional part of telencephalon6.80e-1129
telencephalon6.80e-1129
gray matter1.80e-1034
cerebral cortex4.38e-0921
cerebral hemisphere4.38e-0921
pallium4.38e-0921
eye4.16e-089
camera-type eye4.16e-089
simple eye4.16e-089
immature eye4.16e-089
ocular region4.16e-089
visual system4.16e-089
face4.16e-089
optic cup4.16e-089
optic vesicle4.16e-089
eye primordium4.16e-089
regional part of cerebral cortex6.67e-0817
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