FFCP PHASE1:Mm9::chr9:91260594..91260612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22771 | |EntrezGene=22771 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=819 | |MCL_coexpression_id=819 | ||
|TSSclassifier=NA | |||
|UniProt=P46684 | |UniProt=P46684 | ||
|association_with_transcript=0bp_to_ENSMUST00000034927,uc009raf.1_5end | |association_with_transcript=0bp_to_ENSMUST00000034927,uc009raf.1_5end | ||
|cluster_id=chr9:91260594..91260612,- | |||
|description=CAGE_peak_1_at_Zic1_5end | |description=CAGE_peak_1_at_Zic1_5end | ||
|id=chr9:91260594..91260612,- | |id=chr9:91260594..91260612,- | ||
Latest revision as of 06:10, 27 September 2015
| Short description: | p1@Zic1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Zic1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:819 |
| Association with transcript: | 0bp_to_ENSMUST00000034927, uc009raf.1_5end |
| EntrezGene: | Zic1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Zic1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.98e-17 | 23 |
| neuroblast (sensu Vertebrata) | 2.98e-17 | 23 |
| neural cell | 8.00e-14 | 43 |
| ectodermal cell | 3.03e-13 | 44 |
| neurectodermal cell | 3.03e-13 | 44 |
| neuron | 2.03e-09 | 33 |
| neuronal stem cell | 2.03e-09 | 33 |
| neuroblast | 2.03e-09 | 33 |
| electrically signaling cell | 2.03e-09 | 33 |
| electrically responsive cell | 8.40e-07 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 9.15e-31 | 95 |
| ectoderm | 9.15e-31 | 95 |
| presumptive ectoderm | 9.15e-31 | 95 |
| neurectoderm | 2.46e-30 | 64 |
| neural plate | 2.46e-30 | 64 |
| presumptive neural plate | 2.46e-30 | 64 |
| central nervous system | 3.67e-30 | 73 |
| regional part of nervous system | 3.72e-30 | 54 |
| nervous system | 1.13e-29 | 75 |
| neural tube | 3.21e-28 | 52 |
Showing 1 to 10 of 36 entries
