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FFCP PHASE1:Mm9::chr11:29592937..29592997,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68585
|EntrezGene=68585
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BH78,Q8BHF5,Q99P72
|UniProt=Q8BH78,Q8BHF5,Q99P72
|association_with_transcript=0bp_to_ENSMUST00000078830,ENSMUST00000102842,ENSMUST00000102843,ENSMUST00000170731_5end
|association_with_transcript=0bp_to_ENSMUST00000078830,ENSMUST00000102842,ENSMUST00000102843,ENSMUST00000170731_5end
|cluster_id=chr11:29592937..29592997,+
|description=CAGE_peak_1_at_Rtn4_5end
|description=CAGE_peak_1_at_Rtn4_5end
|id=chr11:29592937..29592997,+
|id=chr11:29592937..29592997,+
|ontology_enrichment_celltype=CL:0000055!3.82e-20!50;CL:0000221!3.89e-18!44;CL:0000133!3.89e-18!44;CL:0002319!4.79e-18!43;CL:0000393!5.99e-16!39;CL:0000211!5.99e-16!39;CL:0000540!7.94e-13!33;CL:0000047!7.94e-13!33;CL:0000031!7.94e-13!33;CL:0000404!7.94e-13!33;CL:0002321!2.86e-11!70;CL:0000220!2.86e-11!70;CL:0000117!1.80e-08!23;CL:0000337!1.80e-08!23
|ontology_enrichment_celltype=CL:0000055!3.82e-20!50;CL:0000221!3.89e-18!44;CL:0000133!3.89e-18!44;CL:0002319!4.79e-18!43;CL:0000393!5.99e-16!39;CL:0000211!5.99e-16!39;CL:0000540!7.94e-13!33;CL:0000047!7.94e-13!33;CL:0000031!7.94e-13!33;CL:0000404!7.94e-13!33;CL:0002321!2.86e-11!70;CL:0000220!2.86e-11!70;CL:0000117!1.80e-08!23;CL:0000337!1.80e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000221,3.89e-18,44;CL:0000133,3.89e-18,44;CL:0002319,4.79e-18,43;CL:0000393,5.99e-16,39;CL:0000211,5.99e-16,39;CL:0000540,7.94e-13,33;CL:0000047,7.94e-13,33;CL:0000031,7.94e-13,33;CL:0000404,7.94e-13,33;CL:0002321,2.86e-11,70;CL:0000117,1.80e-08,23;CL:0000337,1.80e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.77e-22!102;UBERON:0000924!1.77e-22!102;UBERON:0006601!1.77e-22!102;UBERON:0000073!1.26e-21!75;UBERON:0001016!1.26e-21!75;UBERON:0001017!2.45e-20!73;UBERON:0005743!2.45e-20!73;UBERON:0002346!2.12e-14!71;UBERON:0003075!2.12e-14!71;UBERON:0007284!2.12e-14!71;UBERON:0002020!3.63e-11!34;UBERON:0001049!6.73e-11!52;UBERON:0005068!6.73e-11!52;UBERON:0006241!6.73e-11!52;UBERON:0007135!6.73e-11!52;UBERON:0000955!4.08e-10!50;UBERON:0006238!4.08e-10!50;UBERON:0000033!8.39e-10!63;UBERON:0002616!9.42e-10!49;UBERON:0002791!3.02e-09!29;UBERON:0003528!3.02e-09!29;UBERON:0001893!3.02e-09!29;UBERON:0003056!1.47e-07!49;UBERON:0003080!2.26e-07!40;UBERON:0000010!2.27e-07!11;UBERON:0002780!4.62e-07!39;UBERON:0001890!4.62e-07!39;UBERON:0006240!4.62e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.26e-21,75;UBERON:0001017,2.45e-20,73;UBERON:0004121,5.67e-20,95;UBERON:0000924,5.67e-20,95;UBERON:0006601,5.67e-20,95;UBERON:0010314,5.34e-16,92;UBERON:0002346,2.64e-12,64;UBERON:0003075,2.64e-12,64;UBERON:0007284,2.64e-12,64;UBERON:0000073,1.29e-11,54;UBERON:0010371,1.45e-11,73;UBERON:0002020,3.63e-11,34;UBERON:0001049,6.73e-11,52;UBERON:0005068,6.73e-11,52;UBERON:0006241,6.73e-11,52;UBERON:0007135,6.73e-11,52;UBERON:0003528,3.02e-09,29;UBERON:0002791,3.02e-09,29;UBERON:0001893,3.02e-09,29;UBERON:0000955,6.62e-09,47;UBERON:0006238,6.62e-09,47;UBERON:0002616,1.48e-08,46;UBERON:0003056,1.47e-07,49;UBERON:0003080,2.26e-07,40;UBERON:0000010,2.27e-07,11;UBERON:0002780,4.62e-07,39;UBERON:0001890,4.62e-07,39;UBERON:0006240,4.62e-07,39
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31097895437,125.93422739822,124.407536128609,121.191222879129,119.220082204182,148.114992659802,101.823061431788,107.061967939021,95.0649149022996,20.856638731315,148.021380583539,156.689190462871,160.227779195495,151.633632762856,139.05089127891,123.459815055333,121.350486674561,95.5268627718226,40.102964057117,33.1234507196545,100.175525239133,107.849814534367,87.5097355044328,75.4839981500989,77.1605058326845,82.8501249437875,66.3478881350228,76.6508646036056,63.5078970173849,66.2237149831949,59.8907539712833,74.9451102888696,71.6778220220454,72.931186961299,132.183813647668,203.339133290643,256.940485329538,300.849232524429,234.338977561047,226.908112820479,184.616837261403,179.211964910099,114.860011824098,246.231803381041,214.971885448852,226.866623322001,169.790944155563,176.066207581055,187.337686552646,181.581052562356,159.864027144598,144.552428465961,171.896423501604,122.469070149328,177.566068663459,134.025880516995,158.262472811459,128.702481853581,145.787902200861,139.126451603811,142.164189494837,160.138685586316,140.499649740671,156.650207332168,142.601514087874,140.181336682414,139.830932852234,140.257415189608,146.698456915187,149.838433446698,131.178269915319,134.752089562681,136.600597884721,140.57639347802,127.782580434723,132.332085420763,139.677906383668,132.976554526862,125.398848895465,120.000750204539,120.74899754997,122.902723030505,147.019275174327,139.396146295905,144.407571162576,99.4431434902345,126.583399248934,164.356432555932,190.605470966653,154.160929965524,214.011569832105,174.263670514716,152.428670611585,106.195468714153
|phase1_expression=130.040863849093,30.3608604646244,40.0399330662792,16.9379958331825,14.0250804384977,51.7068157488621,53.2636820557799,52.8114392876047,76.0259099619,60.1545832647523,35.955773327356,27.7607113303771,58.2082481766099,38.7272382716158,63.6239645067916,52.6435695213547,58.7631977627643,67.8243655520211,69.3799034045038,71.7218511538671,71.6914935973518,91.3476751048145,75.2255392720134,51.8375449850638,69.5110121633525,28.137366241636,41.3531516312712,45.8953725620944,57.1970492563685,40.5768508913488,85.3662466022923,16.5107975099504,9.22597181376855,47.5445043046316,43.3277429626912,45.8807621189439,46.7547825840825,174.946221648027,151.579056837617,123.028079833843,172.940057481118,186.471417393656,151.964740498751,202.064392850802,210.86401693659,288.902587902487,266.013057078333,170.93172260227,362.921573877347,294.755726996614,223.838288178955,232.879154271254,77.5155639986742,102.2760620236,92.0897009650351,414.187692017875,346.132395446018,347.047318102719,220.120309415242,199.429599185556,203.459880525484,390.010056411571,293.467282716676,402.705123483426,508.277310359425,421.314708163037,411.650551852288,334.654143935074,210.178844149284,160.657066614712,179.61751699408,203.097849911104,190.388682300291,203.824689893684,143.288979172263,200.389695480985,252.1653674886,226.261963086953,258.058975870489,239.241725942572,187.458181741337,226.076402821634,223.904765199108,202.031777001373,234.69810858518,266.933498439143,248.296211313636,234.863301739879,309.871583119389,387.304245547276,239.138203178884,46.4628893569949,87.0363307145921,7.01614149129162,35.0879265421741,18.8171292580881,41.9928816193938,146.910938062286,162.626038881396,192.923407682646,166.476922176036,164.257891090327,104.470148279725,142.213340630666,342.27233583873,405.375784760158,430.706827152595,35.6253704723467,51.0107630784928,130.480640237981,181.986107777677,236.569676648534,263.132282369163,266.025460575379,215.18733405834,184.227222889304,113.462490190078,82.5662328012695,99.9609923703358,152.546139500407,82.3738863857268,82.4287930329878,87.6041277725174,117.697880398642,142.214313926336,54.9232668698471,124.607729486157,77.987355029143,104.324656426986,214.350404988301,193.980255595098,283.601872718735,180.429644359583,169.027917295348,239.579615377173,219.350187667608,157.85101396799,82.3574145438816,40.9410868662553,86.2811609134543,141.440921500459,160.011864685697,175.020390170799,154.623143099444,156.960203542113,179.871663279929,169.506419728549,122.107990988815,122.011483999989,131.050513556299,126.332907149715,161.108863334268,144.584569597311,139.997370941911,124.909756799622,138.925918239308,73.7323846678896,64.8516725929082,67.630912856151,166.736246891079,153.145517167656,157.374241716927,183.003680607368,170.791353156747,166.762749031256,160.680955822532,170.621883290158,176.315666974426,168.34472646149,130.67730140696,98.0932595504854,89.4743923043034,80.3553421965245,83.6105988877116,203.560670210075,276.195979625999,26.10308385572,43.8987940661483,141.196821854325,128.659116210683,115.207510421951,103.867015181021,112.745668229349,122.695528842601,59.3161326930639,119.90083903908,126.672945235336,147.227789310452,139.789250464409,52.1315257019448,60.5186539649144,70.496010732046,180.374173806381,131.728535039017,136.376360164427,113.230138281995,105.704105506356,122.597413168277,110.853649578823,70.4100405862702,78.0283677371633,70.4597805993481,42.9856309276366,68.4064933435986,67.4197353238286,50.3691131742072,63.2923578732129,54.988392423551,63.4018370935735,65.307023201334,64.205549802914,48.3228087211023,148.081252723175,68.8460753186731,49.9260276983297,40.4126204715379,27.8065990958964,48.2443521363367,127.294948024791,141.171101769011,133.305350729577,126.120598730965,110.539106943884,122.614580447409,132.352264332624,151.228577089794,166.620347320244,172.078063857098,199.159006053201,131.909968346169,144.364644839889,147.108092577397,428.247246387533,328.519033026501,50.1599558479417,86.9200750859907,298.624097377293,306.97740718498,259.672953476654,82.55799319583,250.198017997092,235.434562810873,244.936403222192,273.38030485772,303.897391448386,349.03336246263,329.515911163364,336.094236598009,341.923927923743,226.210206760952,149.604849809515,153.848681568509,151.159098280119,159.361138791469,35.84118735179,98.0833770066125,85.2552430640598,69.7838795096823,63.7852088622469,85.4669711284118,83.9891952796719,98.1541069589265,80.2119101365623,49.6177709959231,41.1132573442495,55.6931933540209,47.3211051997765,144.949180695205,123.796260380096,132.460287649524,109.773604624567,117.18831316456,106.29866730897,80.6832115153688,207.215118220256,127.52290666002,61.3068946592794,124.159348464934,184.55383971342,147.042910974844,168.673122076432,153.635882161377,77.2424217069104,383.830375161755,84.7519568757349,144.677194442219,90.560123883789,61.2197485265246,69.7140561377228,60.1686595533155,135.642787135097,130.154850661002,149.532371656387,77.3283200592242,138.238829194956,130.531097895437,125.93422739822,124.407536128609,121.191222879129,119.220082204182,148.114992659802,101.823061431788,107.061967939021,95.0649149022996,20.856638731315,148.021380583539,156.689190462871,160.227779195495,151.633632762856,139.05089127891,123.459815055333,121.350486674561,95.5268627718226,40.102964057117,33.1234507196545,100.175525239133,107.849814534367,87.5097355044328,75.4839981500989,77.1605058326845,82.8501249437875,66.3478881350228,76.6508646036056,63.5078970173849,66.2237149831949,59.8907539712833,74.9451102888696,71.6778220220454,72.931186961299,132.183813647668,203.339133290643,256.940485329538,300.849232524429,234.338977561047,226.908112820479,184.616837261403,179.211964910099,114.860011824098,246.231803381041,214.971885448852,226.866623322001,169.790944155563,176.066207581055,187.337686552646,181.581052562356,159.864027144598,144.552428465961,171.896423501604,122.469070149328,177.566068663459,134.025880516995,158.262472811459,128.702481853581,145.787902200861,139.126451603811,142.164189494837,160.138685586316,140.499649740671,156.650207332168,142.601514087874,140.181336682414,139.830932852234,140.257415189608,146.698456915187,149.838433446698,131.178269915319,134.752089562681,136.600597884721,140.57639347802,127.782580434723,132.332085420763,139.677906383668,132.976554526862,125.398848895465,120.000750204539,120.74899754997,122.902723030505,147.019275174327,139.396146295905,144.407571162576,99.4431434902345,126.583399248934,164.356432555932,190.605470966653,154.160929965524,214.011569832105,174.263670514716,152.428670611585,106.195468714153
|short_description=p1@Rtn4
|short_description=p1@Rtn4
}}
}}

Latest revision as of 06:19, 27 September 2015

Short description:p1@Rtn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtn4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000078830, ENSMUST00000102842, ENSMUST00000102843, ENSMUST00000170731_5end
EntrezGene:Rtn4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7130.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I530.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I640.04
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I751.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I853.26
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E952.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E776.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F260.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E635.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F127.76
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E458.21
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A163.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A352.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A558.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A267.82
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A469.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A671.72
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A371.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H291.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I975.23
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D151.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D269.51
GP2+ M cell, pool1.CNhs13228.11845-124H928.14
GP2+ M cell, pool2.CNhs13231.11846-124I141.35
GP2+ M cell, pool3.CNhs13240.11847-124I245.90
Ileum epithelium, pool1.CNhs13199.10252-104B957.20
Ileum epithelium, pool2.CNhs13232.10253-104C140.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C885.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F543.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F645.88
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F746.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8174.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1151.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3123.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9172.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2186.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4151.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8202.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9210.86
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3288.90
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7266.01
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2170.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8362.92
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3294.76
Mouse Astrocytes, donor2.CNhs12078.11552-120C4223.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C4232.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A277.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9102.28
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A192.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1414.19
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1346.13
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5347.05
Mouse Granule cells, donor1.CNhs12131.11713-123C3220.12
Mouse Granule cells, donor2.CNhs12357.11731-123E3199.43
Mouse Granule cells, donor3.CNhs12108.11636-122C7203.46
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6390.01
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1293.47
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7402.71
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7508.28
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2421.31
Mouse Microglia, donor1.CNhs12629.11718-123C8411.65
Mouse Microglia, donor2.CNhs12634.11736-123E8334.65
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5210.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5160.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9179.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1203.10
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5190.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2203.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2143.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6200.39
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3252.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3226.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7258.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4239.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4187.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8226.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4223.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5202.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6234.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6266.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6248.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1234.86
Mouse Schwann, donor1.CNhs12507.11728-123D9309.87
Mouse Schwann, donor2.CNhs12573.11746-123F9387.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3239.14
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C487.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A741.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7146.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3162.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8192.92
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6166.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1164.26
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8104.47
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6142.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1342.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2405.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3430.71
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.63
accessory axillary lymph node, adult.CNhs10475.1063-29H951.01
adrenal gland, adult.CNhs10508.49-24D7130.48
adrenal gland, embryo E14.CNhs11038.406-44C5181.99
adrenal gland, embryo E16.CNhs11004.1254-43D6236.57
adrenal gland, embryo E17.CNhs11043.1263-45I1263.13
adrenal gland, embryo E18.CNhs11026.1262-18F5266.03
adrenal gland, neonate N00.CNhs11191.1311-23C1215.19
adrenal gland, neonate N25.CNhs11223.1377-27I3184.23
amnion, adult pregnant day17.5.CNhs10488.583-22A8113.46
aorta, adult.CNhs10498.46-23H182.57
bone (os femoris), adult.CNhs10483.56-12G299.96
bone (os femoris), neonate N02.CNhs11227.1985-43F5152.55
bone (os femoris), neonate N16.CNhs11225.1525-43A682.37
bone (os femoris), neonate N20.CNhs11195.1350-25C382.43
cecum, adult.CNhs10467.37-13H487.60
cerebellum, adult.CNhs10494.15-8B2117.70
cerebellum, neonate N30.CNhs11135.1395-42I2142.21
colon, adult.CNhs10468.36-18H754.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7124.61
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D177.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4104.32
corpora quadrigemina, adult.CNhs10501.16-22A4214.35
corpus striatum, adult.CNhs10487.19-21D8193.98
corpus striatum, neonate N00.CNhs11226.630-43F1283.60
cortex, adult.CNhs10473.12-14D5180.43
cortex, neonate N30.CNhs11107.1392-42F2169.03
diencephalon, adult.CNhs10482.20-12F2239.58
diencephalon, neonate N30.CNhs11201.1388-42B2219.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1157.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A282.36
epididymis, adult.CNhs10490.58-23B240.94
eyeball, adult.CNhs10484.31-12G486.28
eyeball, embryo E12.CNhs11016.345-16C6141.44
eyeball, embryo E14.CNhs10521.399-16E2160.01
eyeball, embryo E15.CNhs10593.426-16C9175.02
eyeball, embryo E17.CNhs11023.1261-18D4154.62
eyeball, neonate N00.CNhs11207.633-15C6156.96
eyeball, neonate N01.CNhs11140.1532-43E7179.87
eyeball, neonate N02.CNhs11205.1551-44G8169.51
eyeball, neonate N16.CNhs11188.777-19A2122.11
forelimb, embryo E11.CNhs10596.335-25E2122.01
forelimb, embryo E12.CNhs10600.359-14H2131.05
forelimb, embryo E13.CNhs10589.384-1E2126.33
forelimb, embryo E14.CNhs10577.413-26A8161.11
forelimb, embryo E15.CNhs11007.437-20E7144.58
forelimb, embryo E17.CNhs10598.1517-43C4140.00
forelimb, embryo E18.CNhs11008.1520-43B5124.91
gonad, embryo E13.CNhs11044.1564-45I6138.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C873.73
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D264.85
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D567.63
heart, embryo E11.CNhs10586.331-24E9166.74
heart, embryo E12.CNhs11015.353-12F5153.15
heart, embryo E13.CNhs11013.376-3I9157.37
heart, embryo E14.CNhs10597.403-26D4183.00
heart, embryo E15.CNhs11017.431-16C8170.79
heart, embryo E16.CNhs11021.457-17C6166.76
heart, embryo E17.CNhs11025.479-18E5160.68
heart, embryo E18.CNhs11030.1283-20G3170.62
heart, neonate N00.CNhs11213.639-21E3176.32
heart, neonate N03.CNhs11221.1349-25I2168.34
heart, neonate N10.CNhs11118.749-24G1130.68
heart, neonate N16.CNhs11209.782-15G198.09
heart, neonate N20.CNhs11127.821-26I689.47
heart, neonate N25.CNhs11196.1351-25D380.36
heart, neonate N30.CNhs11202.1390-42D283.61
hippocampus, adult.CNhs10478.13-16E8203.56
hippocampus, neonate N00.CNhs11228.627-43G1276.20
intestinal mucosa, adult.CNhs10506.860-29I326.10
intestine, adult.CNhs10496.178-9A343.90
intestine, embryo E12.CNhs11019.1251-16I5141.20
intestine, embryo E13.CNhs11010.381-16D5128.66
intestine, embryo E15.CNhs10602.976-16D8115.21
intestine, embryo E16.CNhs10585.463-22H4103.87
intestine, embryo E17.CNhs10582.482-18D3112.75
intestine, embryo E18.CNhs10526.1289-20F7122.70
intestine, neonate N00.CNhs11126.644-26D159.32
intestine, neonate N01.CNhs11192.1322-23E9119.90
intestine, neonate N06.CNhs11102.688-20B8126.67
intestine, neonate N07.CNhs11095.720-20F2147.23
intestine, neonate N10.CNhs11098.755-23A5139.79
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E360.52
intestine, neonate N30.CNhs11131.1384-42G170.50
kidney, embryo E14.CNhs10606.411-4I9180.37
kidney, embryo E15.CNhs10997.434-16F8131.73
kidney, embryo E16.CNhs10584.464-22A5136.38
kidney, embryo E17.CNhs11028.483-18I2113.23
kidney, embryo E18.CNhs11001.1288-20C7105.70
kidney, neonate N00.CNhs11214.646-21G7122.60
kidney, neonate N10.CNhs11206.758-6D5110.85
kidney, neonate N20.CNhs11113.832-19I170.41
kidney, neonate N25.CNhs11122.1353-25F378.03
kidney, neonate N30.CNhs11203.1385-42H170.46
liver, adult pregnant day01.CNhs10466.508-5B242.99
liver, embryo E12.CNhs10601.355-15F868.41
liver, embryo E13.CNhs10524.378-3H667.42
liver, embryo E14.CNhs10594.409-16E150.37
liver, embryo E15.CNhs10520.433-16D763.29
liver, embryo E16.CNhs10523.462-17F554.99
liver, embryo E17.CNhs10510.481-18A363.40
liver, embryo E18.CNhs10579.499-43G465.31
liver, neonate N00.CNhs11117.641-24F464.21
liver, neonate N03.CNhs11123.1345-25G248.32
liver, neonate N06.CNhs11101.684-20A8148.08
liver, neonate N07.CNhs11103.716-20H268.85
liver, neonate N10.CNhs11115.751-24B949.93
liver, neonate N20.CNhs11220.823-25A340.41
liver, neonate N25.CNhs11198.1368-26H127.81
liver, neonate N30.CNhs11106.1382-42D148.24
lung, adult.CNhs10474.28-22B1127.29
lung, embryo E12.CNhs10522.354-16G2141.17
lung, embryo E14.CNhs10604.404-26F8133.31
lung, embryo E15.CNhs11020.432-17C5126.12
lung, embryo E16.CNhs10998.458-17B6110.54
lung, embryo E17.CNhs10605.480-44A6122.61
lung, embryo E18.CNhs10583.1287-20I6132.35
lung, neonate N00.CNhs11224.640-42C6151.23
lung, neonate N06.CNhs11212.683-20E5166.62
lung, neonate N07.CNhs11111.715-19A3172.08
lung, neonate N10.CNhs11219.750-23E6199.16
lung, neonate N20.CNhs11109.822-18A4131.91
lung, neonate N25.CNhs11119.1359-25C7144.36
lung, neonate N30.CNhs11133.1394-42H2147.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1428.25
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1328.52
mammary gland, adult lactating day02.CNhs10480.595-22B650.16
mammary gland, adult pregnant day19.CNhs10476.588-5H286.92
medulla oblongata, adult.CNhs10477.17-12C2298.62
medulla oblongata, neonate N30.CNhs11200.1396-42A3306.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7259.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C282.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1250.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2235.43
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3244.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7273.38
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8303.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9349.03
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4329.52
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5336.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6341.92
olfactory brain, adult.CNhs10489.18-22I9226.21
ovary, adult.CNhs10507.91-2I7149.60
ovary, embryo E18.CNhs11040.505-44H7153.85
ovary, neonate N00.CNhs11217.1299-22I4151.16
oviduct, adult pregnant day01.CNhs10500.988-6G6159.36
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F498.08
pancreas, embryo E15.CNhs11042.1556-45F285.26
pancreas, embryo E16.CNhs11003.460-26E569.78
pancreas, embryo E17.CNhs10599.1558-45G363.79
pancreas, embryo E18.CNhs10580.1535-43I785.47
pancreas, neonate N00.CNhs11105.645-26G983.99
pancreas, neonate N01.CNhs11138.1531-43D798.15
pancreas, neonate N02.CNhs11139.1539-43D880.21
pancreas, neonate N16.CNhs11136.787-43B649.62
pancreas, neonate N25.CNhs11094.1555-45E241.11
pancreas, neonate N30.CNhs11182.1548-44H555.69
pituitary gland, adult.CNhs10493.21-1G847.32
pituitary gland, embryo E12.CNhs11018.346-16E6144.95
pituitary gland, embryo E13.CNhs11009.370-44C7123.80
pituitary gland, embryo E14.CNhs11037.398-44A5132.46
pituitary gland, embryo E15.CNhs10592.427-16B9109.77
pituitary gland, embryo E16.CNhs11036.449-43F6117.19
pituitary gland, embryo E17.CNhs11039.1265-44F5106.30
pituitary gland, neonate N00.CNhs11190.1308-22E980.68
placenta, adult pregnant day10.CNhs10472.539-13I7207.22
placenta, adult pregnant day17.CNhs10464.577-18G3127.52
prostate, adult.CNhs10470.859-1F861.31
skin, adult.CNhs10492.30-1C3124.16
skin, neonate N00.CNhs11124.650-25G4184.55
skin, neonate N03.CNhs11215.662-22H3147.04
skin, neonate N06.CNhs11097.693-20I5168.67
skin, neonate N10.CNhs11108.762-6C4153.64
small intestine, neonate N16.CNhs11114.790-21I177.24
spinal cord, adult.CNhs10505.24-13C9383.83
spleen, adult.CNhs10465.25-2G284.75
spleen, embryo E16.CNhs11035.461-43C1144.68
spleen, embryo E18.CNhs11011.1271-21F290.56
spleen, neonate N10.CNhs11116.752-24D161.22
spleen, neonate N20.CNhs11112.824-19H169.71
spleen, neonate N25.CNhs11099.1354-25G360.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6135.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9130.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3149.53
stomach, adult.CNhs10503.33-1H677.33
stomach, embryo E12.CNhs10588.356-43E3138.24
stomach, embryo E15.CNhs10603.1252-16G8130.53
stomach, embryo E16.CNhs11022.459-17D4125.93
stomach, embryo E17.CNhs11006.1035-18D5124.41
stomach, embryo E18.CNhs10999.1286-20C6121.19
stomach, neonate N03.CNhs11193.1340-24B8119.22
stomach, neonate N07.CNhs11210.718-18A9148.11
stomach, neonate N25.CNhs11104.1355-25E4101.82
stomach, neonate N30.CNhs11134.1386-42I1107.06
submandibular gland, adult.CNhs10469.59-29C195.06
testis, adult.CNhs10504.57-7G520.86
testis, embryo E13.CNhs11031.389-23F5148.02
testis, embryo E15.CNhs11034.443-27C5156.69
testis, embryo E16.CNhs11033.470-26G5160.23
testis, embryo E17.CNhs11029.486-18I5151.63
testis, embryo E18.CNhs11027.503-18G5139.05
testis, neonate N00.CNhs11189.1300-22B7123.46
testis, neonate N07.CNhs11222.726-26I4121.35
testis, neonate N10.CNhs11204.763-44D995.53
testis, neonate N20.CNhs11110.839-18H340.10
testis, neonate N30.CNhs11130.1391-42E233.12
thymus, adult.CNhs10471.38-12B5100.18
thymus, embryo E14.CNhs11041.402-44I4107.85
thymus, embryo E15.CNhs11005.430-45I287.51
thymus, embryo E16.CNhs11002.456-26C575.48
thymus, embryo E17.CNhs10581.478-18C177.16
thymus, embryo E18.CNhs10595.1273-19G482.85
thymus, neonate N02.CNhs11181.1541-43F866.35
thymus, neonate N03.CNhs11137.2104-43C776.65
thymus, neonate N06.CNhs11197.681-26C463.51
thymus, neonate N07.CNhs11211.713-19D366.22
thymus, neonate N10.CNhs11194.748-24E459.89
thymus, neonate N20.CNhs11186.820-7A274.95
thymus, neonate N25.CNhs11125.1362-25G771.68
thymus, neonate N30.CNhs11132.1393-42G272.93
tongue, adult.CNhs10499.32-1B4132.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3203.34
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7256.94
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5300.85
urinary bladder, adult.CNhs10481.879-12E4234.34
uterus, adult pregnant day19.CNhs10497.590-15F5226.91
uterus, adult.CNhs10509.92-27E5184.62
vagina, adult.CNhs10502.89-27D5179.21
vesicular gland, adult.CNhs10491.51-27F8114.86
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1246.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2214.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3226.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7169.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4176.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5187.34
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6181.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7159.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8144.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9171.90
whole body, embryo E11.CNhs11014.324-5I8122.47
whole body, embryo E12.CNhs10587.857-27C9177.57
whole body, embryo E13.CNhs10512.372-23H2134.03
whole body, embryo E14.5.CNhs10578.420-27D2158.26
whole body, embryo E14.CNhs10519.395-14B1128.70
whole body, embryo E16.CNhs10514.453-14F2145.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5139.13
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5142.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5160.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5140.50
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5156.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5142.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5140.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5139.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5140.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5146.70
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5149.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5131.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5134.75
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5136.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5140.58
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5127.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5132.33
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5139.68
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5132.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5125.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5120.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5120.75
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5122.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5147.02
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5139.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5144.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G599.44
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5126.58
whole body, embryo E17.5.CNhs10513.490-9F9164.36
whole body, embryo E17.CNhs10517.475-3I5190.61
whole body, embryo E18.CNhs10516.493-3B3154.16
whole body, neonate N00.CNhs10525.657-19C2214.01
whole body, neonate N01.CNhs10576.659-23C6174.26
whole body, neonate N06.CNhs10515.692-21D1152.43
whole body, neonate N10.CNhs10518.761-6B4106.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.89e-1844
neurectodermal cell3.89e-1844
neural cell4.79e-1843
electrically responsive cell5.99e-1639
electrically active cell5.99e-1639
neuron7.94e-1333
neuronal stem cell7.94e-1333
neuroblast7.94e-1333
electrically signaling cell7.94e-1333
embryonic cell2.86e-1170
CNS neuron (sensu Vertebrata)1.80e-0823
neuroblast (sensu Vertebrata)1.80e-0823

Uber anatomy
Ontology termp-valuen
nervous system1.26e-2175
central nervous system2.45e-2073
ectoderm-derived structure5.67e-2095
ectoderm5.67e-2095
presumptive ectoderm5.67e-2095
structure with developmental contribution from neural crest5.34e-1692
neurectoderm2.64e-1264
neural plate2.64e-1264
presumptive neural plate2.64e-1264
regional part of nervous system1.29e-1154
ecto-epithelium1.45e-1173
gray matter3.63e-1134
neural tube6.73e-1152
neural rod6.73e-1152
future spinal cord6.73e-1152
neural keel6.73e-1152
brain grey matter3.02e-0929
regional part of telencephalon3.02e-0929
telencephalon3.02e-0929
brain6.62e-0947
future brain6.62e-0947
regional part of brain1.48e-0846
pre-chordal neural plate1.47e-0749
anterior neural tube2.26e-0740
peripheral nervous system2.27e-0711
regional part of forebrain4.62e-0739
forebrain4.62e-0739
future forebrain4.62e-0739
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