FFCP PHASE1:Mm9::chr9:95307527..95307538,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54371 | |EntrezGene=54371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=986 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WV3 | |UniProt=Q80WV3 | ||
|association_with_transcript=150bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | |association_with_transcript=150bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | ||
|cluster_id=chr9:95307527..95307538,- | |||
|description=CAGE_peak_9_at_Chst2_5end | |description=CAGE_peak_9_at_Chst2_5end | ||
|id=chr9:95307527..95307538,- | |id=chr9:95307527..95307538,- | ||
|ontology_enrichment_celltype=CL:0002453!5.61e-11!8;CL:0000333!2.62e-10!10;CL:0000095!2.62e-10!10;CL:0000243!2.62e-10!10;CL:0000123!2.62e-10!10;CL:0000125!2.62e-10!10;CL:0000030!2.62e-10!10;CL:0000339!2.62e-10!10;CL:0000128!1.71e-08!6;CL:0000126!1.71e-08!6;CL:0000127!1.71e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.80e-39,8;CL:0000333,3.69e-31,10;CL:0000095,3.69e-31,10;CL:0000243,3.69e-31,10;CL:0000123,3.69e-31,10;CL:0000125,3.69e-31,10;CL:0000030,3.69e-31,10;CL:0000339,3.69e-31,10;CL:0000128,3.44e-29,6;CL:0000126,3.44e-29,6;CL:0000127,3.44e-29,6;CL:0000878,1.54e-11,2;CL:0000129,1.54e-11,2;CL:0002605,3.48e-11,2;CL:0002604,3.48e-11,2;CL:0002603,7.75e-11,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.76e-11!75;UBERON:0001016!9.76e-11!75;UBERON:0001017!1.95e-10!73;UBERON:0005743!1.95e-10!73;UBERON:0002020!1.13e-09!34;UBERON:0001049!4.40e-09!52;UBERON:0005068!4.40e-09!52;UBERON:0006241!4.40e-09!52;UBERON:0007135!4.40e-09!52;UBERON:0000955!7.76e-09!50;UBERON:0006238!7.76e-09!50;UBERON:0002619!1.05e-08!17;UBERON:0002791!1.46e-08!29;UBERON:0003528!1.46e-08!29;UBERON:0001893!1.46e-08!29;UBERON:0004121!1.80e-08!102;UBERON:0000924!1.80e-08!102;UBERON:0006601!1.80e-08!102;UBERON:0000956!2.08e-08!21;UBERON:0001869!2.08e-08!21;UBERON:0000203!2.08e-08!21;UBERON:0000033!2.36e-08!63;UBERON:0002616!3.44e-08!49;UBERON:0001264!8.72e-08!12;UBERON:0003922!8.72e-08!12;UBERON:0002114!8.72e-08!12;UBERON:0003923!8.72e-08!12;UBERON:0003924!8.72e-08!12;UBERON:0003921!8.72e-08!12;UBERON:0002780!1.24e-07!39;UBERON:0001890!1.24e-07!39;UBERON:0006240!1.24e-07!39;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10;UBERON:0003080!2.69e-07!40;UBERON:0001045!5.45e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.94e-10,12;UBERON:0002619,4.94e-10,17;UBERON:0001017,1.75e-09,73;UBERON:0001016,3.54e-09,75;UBERON:0000956,4.88e-08,21;UBERON:0001869,4.88e-08,21;UBERON:0000203,4.88e-08,21;UBERON:0002021,5.93e-08,10;UBERON:0000411,5.93e-08,10;UBERON:0001950,5.93e-08,10;UBERON:0002616,1.99e-07,46;UBERON:0000955,3.04e-07,47;UBERON:0006238,3.04e-07,47;UBERON:0004121,8.06e-07,95;UBERON:0000924,8.06e-07,95;UBERON:0006601,8.06e-07,95 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.281577444303333,0.70219357896598,0.34243593645101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.96222640742402,4.39372365468944,1.74986909166855,1.53985063787899,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,4.19440154725767,4.61061966385865,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0,0.883885756421003,0.427115042397309,0,0,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.664394068946325,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0.162886959353576,0,1.32745138339963,0,0,0.377210159511796,0.590603785761546,0.922305443831782,2.32585463851399,3.63533729477506,1.78248689192361,0.948110273807448,5.27093042874994,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,0.460325236507177,0,2.06223818812425,1.37016503954128,0.755393897389701,1.35004500046361,0.900642406448441,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.281577444303333,0.70219357896598,0.34243593645101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.96222640742402,4.39372365468944,1.74986909166855,1.53985063787899,1.43752564364972,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,4.19440154725767,4.61061966385865,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0,0.883885756421003,0.427115042397309,0,0,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.486723789203273,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.664394068946325,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0.162886959353576,0,1.32745138339963,0,0,0.377210159511796,0.590603785761546,0.922305443831782,2.32585463851399,3.63533729477506,1.78248689192361,0.948110273807448,5.27093042874994,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,0.460325236507177,0,2.06223818812425,1.37016503954128,0.755393897389701,1.35004500046361,0.900642406448441,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p9@Chst2 | |short_description=p9@Chst2 | ||
}} | }} |
Latest revision as of 06:32, 27 September 2015
Short description: | p9@Chst2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Chst2_5end |
Coexpression cluster: | MCL_coexpression_mm9:986 |
Association with transcript: | 150bp_to_ENSMUST00000036267, NM_018763, uc009raz.2_5end |
EntrezGene: | Chst2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.80e-39 | 8 |
migratory neural crest cell | 3.69e-31 | 10 |
neuron associated cell | 3.69e-31 | 10 |
glial cell (sensu Vertebrata) | 3.69e-31 | 10 |
neuron associated cell (sensu Vertebrata) | 3.69e-31 | 10 |
glial cell | 3.69e-31 | 10 |
glioblast | 3.69e-31 | 10 |
glioblast (sensu Vertebrata) | 3.69e-31 | 10 |
oligodendrocyte | 3.44e-29 | 6 |
macroglial cell | 3.44e-29 | 6 |
astrocyte | 3.44e-29 | 6 |
central nervous system macrophage | 1.54e-11 | 2 |
microglial cell | 1.54e-11 | 2 |
astrocyte of the cerebral cortex | 3.48e-11 | 2 |
astrocyte of the hippocampus | 3.48e-11 | 2 |
astrocyte of the cerebellum | 7.75e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.94e-10 | 12 |
regional part of cerebral cortex | 4.94e-10 | 17 |
central nervous system | 1.75e-09 | 73 |
nervous system | 3.54e-09 | 75 |
cerebral cortex | 4.88e-08 | 21 |
cerebral hemisphere | 4.88e-08 | 21 |
pallium | 4.88e-08 | 21 |
occipital lobe | 5.93e-08 | 10 |
visual cortex | 5.93e-08 | 10 |
neocortex | 5.93e-08 | 10 |
regional part of brain | 1.99e-07 | 46 |
brain | 3.04e-07 | 47 |
future brain | 3.04e-07 | 47 |
ectoderm-derived structure | 8.06e-07 | 95 |
ectoderm | 8.06e-07 | 95 |
presumptive ectoderm | 8.06e-07 | 95 |