FFCP PHASE1:Mm9::chr9:95307620..95307631,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54371 | |EntrezGene=54371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=986 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WV3 | |UniProt=Q80WV3 | ||
|association_with_transcript=57bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | |association_with_transcript=57bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | ||
|cluster_id=chr9:95307620..95307631,- | |||
|description=CAGE_peak_6_at_Chst2_5end | |description=CAGE_peak_6_at_Chst2_5end | ||
|id=chr9:95307620..95307631,- | |id=chr9:95307620..95307631,- | ||
|ontology_enrichment_celltype=CL:0000333!2.63e-07!10;CL:0000095!2.63e-07!10;CL:0000243!2.63e-07!10;CL:0000123!2.63e-07!10;CL:0000125!2.63e-07!10;CL:0000030!2.63e-07!10;CL:0000339!2.63e-07!10;CL:0002453!2.88e-07!8 | |ontology_enrichment_celltype=CL:0000333!2.63e-07!10;CL:0000095!2.63e-07!10;CL:0000243!2.63e-07!10;CL:0000123!2.63e-07!10;CL:0000125!2.63e-07!10;CL:0000030!2.63e-07!10;CL:0000339!2.63e-07!10;CL:0002453!2.88e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.09e-16,8;CL:0000333,2.95e-12,10;CL:0000095,2.95e-12,10;CL:0000243,2.95e-12,10;CL:0000123,2.95e-12,10;CL:0000125,2.95e-12,10;CL:0000030,2.95e-12,10;CL:0000339,2.95e-12,10;CL:0000128,5.37e-12,6;CL:0000126,5.37e-12,6;CL:0000127,5.37e-12,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.02e-13!50;UBERON:0006238!4.02e-13!50;UBERON:0001049!5.36e-13!52;UBERON:0005068!5.36e-13!52;UBERON:0006241!5.36e-13!52;UBERON:0007135!5.36e-13!52;UBERON:0002616!1.36e-12!49;UBERON:0000073!4.77e-12!75;UBERON:0001016!4.77e-12!75;UBERON:0001017!1.30e-11!73;UBERON:0005743!1.30e-11!73;UBERON:0002020!4.81e-11!34;UBERON:0002780!2.47e-10!39;UBERON:0001890!2.47e-10!39;UBERON:0006240!2.47e-10!39;UBERON:0003080!3.41e-10!40;UBERON:0000033!5.04e-10!63;UBERON:0002791!1.49e-09!29;UBERON:0003528!1.49e-09!29;UBERON:0001893!1.49e-09!29;UBERON:0001264!1.51e-09!12;UBERON:0003922!1.51e-09!12;UBERON:0002114!1.51e-09!12;UBERON:0003923!1.51e-09!12;UBERON:0003924!1.51e-09!12;UBERON:0003921!1.51e-09!12;UBERON:0002346!1.75e-08!71;UBERON:0003075!1.75e-08!71;UBERON:0007284!1.75e-08!71;UBERON:0004121!2.63e-08!102;UBERON:0000924!2.63e-08!102;UBERON:0006601!2.63e-08!102;UBERON:0001045!2.69e-08!13;UBERON:0002619!4.49e-08!17;UBERON:0002021!9.91e-08!10;UBERON:0000411!9.91e-08!10;UBERON:0001950!9.91e-08!10;UBERON:0000475!1.54e-07!200;UBERON:0000956!1.76e-07!21;UBERON:0001869!1.76e-07!21;UBERON:0000203!1.76e-07!21;UBERON:0003056!2.24e-07!49;UBERON:0002075!7.61e-07!19 | |ontology_enrichment_uberon=UBERON:0000955!4.02e-13!50;UBERON:0006238!4.02e-13!50;UBERON:0001049!5.36e-13!52;UBERON:0005068!5.36e-13!52;UBERON:0006241!5.36e-13!52;UBERON:0007135!5.36e-13!52;UBERON:0002616!1.36e-12!49;UBERON:0000073!4.77e-12!75;UBERON:0001016!4.77e-12!75;UBERON:0001017!1.30e-11!73;UBERON:0005743!1.30e-11!73;UBERON:0002020!4.81e-11!34;UBERON:0002780!2.47e-10!39;UBERON:0001890!2.47e-10!39;UBERON:0006240!2.47e-10!39;UBERON:0003080!3.41e-10!40;UBERON:0000033!5.04e-10!63;UBERON:0002791!1.49e-09!29;UBERON:0003528!1.49e-09!29;UBERON:0001893!1.49e-09!29;UBERON:0001264!1.51e-09!12;UBERON:0003922!1.51e-09!12;UBERON:0002114!1.51e-09!12;UBERON:0003923!1.51e-09!12;UBERON:0003924!1.51e-09!12;UBERON:0003921!1.51e-09!12;UBERON:0002346!1.75e-08!71;UBERON:0003075!1.75e-08!71;UBERON:0007284!1.75e-08!71;UBERON:0004121!2.63e-08!102;UBERON:0000924!2.63e-08!102;UBERON:0006601!2.63e-08!102;UBERON:0001045!2.69e-08!13;UBERON:0002619!4.49e-08!17;UBERON:0002021!9.91e-08!10;UBERON:0000411!9.91e-08!10;UBERON:0001950!9.91e-08!10;UBERON:0000475!1.54e-07!200;UBERON:0000956!1.76e-07!21;UBERON:0001869!1.76e-07!21;UBERON:0000203!1.76e-07!21;UBERON:0003056!2.24e-07!49;UBERON:0002075!7.61e-07!19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.97e-21,12;UBERON:0002619,1.42e-18,17;UBERON:0002021,6.47e-17,10;UBERON:0000411,6.47e-17,10;UBERON:0001950,6.47e-17,10;UBERON:0000956,1.31e-16,21;UBERON:0001869,1.31e-16,21;UBERON:0000203,1.31e-16,21;UBERON:0001017,6.99e-15,73;UBERON:0002020,1.33e-14,34;UBERON:0003528,2.58e-14,29;UBERON:0002791,2.58e-14,29;UBERON:0001893,2.58e-14,29;UBERON:0001016,2.80e-14,75;UBERON:0000955,3.48e-13,47;UBERON:0006238,3.48e-13,47;UBERON:0000073,5.43e-13,54;UBERON:0001049,1.60e-12,52;UBERON:0005068,1.60e-12,52;UBERON:0006241,1.60e-12,52;UBERON:0007135,1.60e-12,52;UBERON:0002075,2.19e-12,19;UBERON:0002616,3.22e-12,46;UBERON:0002780,4.90e-12,39;UBERON:0001890,4.90e-12,39;UBERON:0006240,4.90e-12,39;UBERON:0003080,1.29e-11,40;UBERON:0004121,1.31e-10,95;UBERON:0000924,1.31e-10,95;UBERON:0006601,1.31e-10,95;UBERON:0002346,4.34e-09,64;UBERON:0003075,4.34e-09,64;UBERON:0007284,4.34e-09,64;UBERON:0010371,5.44e-09,73;UBERON:0003056,1.30e-08,49 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.422366166455,0.70219357896598,1.19852577757853,0.239316476986009,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,3.12956537739216,7.84890562969608,11.4236815021925,10.4992145500113,7.8392396110203,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0,1.0165335962074,1.77858959222228,0,0,0,11.085204089181,13.831858991576,0.207379224616955,0.135005938331691,0,1.42825492201902,1.76694832761291,0.244981598429908,0,0,1.10115880999389,0.383062014255563,0.921639199537461,0.395658863190582,0.640413505216868,0.52091337055676,1.67509799400829,0,0.916789486660861,0.294628585473668,0.996601765593721,0.186399445825301,0.227178579999552,0.529000920747499,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0.502666365318702,0,0,0,0,0.220841518460394,0,0,0.878342391034642,0,0,0,0,0,0.149790639404823,2.74500361691176,0.753926112677186,2.60736480288415,3.83573185995496,1.24672826735736,1.29793010454206,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0.621377317606506,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,2.94405927989778,1.3377599609307,0.330418782983798,0,0,0,0.38660238396628,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.596869416123452,1.16978452271472,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.49095073923223,0.379419222745544,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.714130922658041,0.390267295715598,1.89162172927429,1.7717175171902,2.23236676120482,0.655453258862952,0.172684981865896,0,0,0,0,0,0.160550589987792,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.283880170416537,0,0.162886959353576,0,13.2745138339963,1.45668381692989,2.41858845571801,2.26326095707078,4.13422650033082,5.84126781093462,2.58428293168221,10.1789444253702,9.26893183800275,6.95280867458795,11.5960469432499,16.5016869197099,0,0.540183282093931,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,3.95326289831947,2.30162618253588,3.43737308063638,4.81188910562325,4.11049511862385,2.2661816921691,4.05013500139084,2.2516060161211,3.17199686288943,3.10656187051092,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.192075457214608,0.17230640686684,0.952587382566147,0.463537303779422,0.38581844092741,0,0,0,0,0,0.290692833264657,0.376437521661322,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.999242311751784,0.467863216890817,0,0,0,0.231867835620421 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.422366166455,0.70219357896598,1.19852577757853,0.239316476986009,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,3.12956537739216,7.84890562969608,11.4236815021925,10.4992145500113,7.8392396110203,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0,1.0165335962074,1.77858959222228,0,0,0,11.085204089181,13.831858991576,0.207379224616955,0.135005938331691,0,1.42825492201902,1.76694832761291,0.244981598429908,0,0,1.10115880999389,0.383062014255563,0.921639199537461,0.395658863190582,0.640413505216868,0.52091337055676,1.67509799400829,0,0.916789486660861,0.294628585473668,0.996601765593721,0.186399445825301,0.227178579999552,0.529000920747499,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0.502666365318702,0,0,0,0,0.220841518460394,0,0,0.878342391034642,0,0,0,0,0,0.149790639404823,2.74500361691176,0.753926112677186,2.60736480288415,3.83573185995496,1.24672826735736,1.29793010454206,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0.621377317606506,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,2.94405927989778,1.3377599609307,0.330418782983798,0,0,0,0.38660238396628,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0.596869416123452,1.16978452271472,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.49095073923223,0.379419222745544,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.714130922658041,0.390267295715598,1.89162172927429,1.7717175171902,2.23236676120482,0.655453258862952,0.172684981865896,0,0,0,0,0,0.160550589987792,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.283880170416537,0,0.162886959353576,0,13.2745138339963,1.45668381692989,2.41858845571801,2.26326095707078,4.13422650033082,5.84126781093462,2.58428293168221,10.1789444253702,9.26893183800275,6.95280867458795,11.5960469432499,16.5016869197099,0,0.540183282093931,0.388076051348264,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0.322928853391811,0.301564624640779,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,3.95326289831947,2.30162618253588,3.43737308063638,4.81188910562325,4.11049511862385,2.2661816921691,4.05013500139084,2.2516060161211,3.17199686288943,3.10656187051092,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.192075457214608,0.17230640686684,0.952587382566147,0.463537303779422,0.38581844092741,0,0,0,0,0,0.290692833264657,0.376437521661322,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.999242311751784,0.467863216890817,0,0,0,0.231867835620421 | ||
|short_description=p6@Chst2 | |short_description=p6@Chst2 | ||
}} | }} |
Latest revision as of 06:33, 27 September 2015
Short description: | p6@Chst2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Chst2_5end |
Coexpression cluster: | MCL_coexpression_mm9:986 |
Association with transcript: | 57bp_to_ENSMUST00000036267, NM_018763, uc009raz.2_5end |
EntrezGene: | Chst2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.09e-16 | 8 |
migratory neural crest cell | 2.95e-12 | 10 |
neuron associated cell | 2.95e-12 | 10 |
glial cell (sensu Vertebrata) | 2.95e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 2.95e-12 | 10 |
glial cell | 2.95e-12 | 10 |
glioblast | 2.95e-12 | 10 |
glioblast (sensu Vertebrata) | 2.95e-12 | 10 |
oligodendrocyte | 5.37e-12 | 6 |
macroglial cell | 5.37e-12 | 6 |
astrocyte | 5.37e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.97e-21 | 12 |
regional part of cerebral cortex | 1.42e-18 | 17 |
occipital lobe | 6.47e-17 | 10 |
visual cortex | 6.47e-17 | 10 |
neocortex | 6.47e-17 | 10 |
cerebral cortex | 1.31e-16 | 21 |
cerebral hemisphere | 1.31e-16 | 21 |
pallium | 1.31e-16 | 21 |
central nervous system | 6.99e-15 | 73 |
gray matter | 1.33e-14 | 34 |
brain grey matter | 2.58e-14 | 29 |
regional part of telencephalon | 2.58e-14 | 29 |
telencephalon | 2.58e-14 | 29 |
nervous system | 2.80e-14 | 75 |
brain | 3.48e-13 | 47 |
future brain | 3.48e-13 | 47 |
regional part of nervous system | 5.43e-13 | 54 |
neural tube | 1.60e-12 | 52 |
neural rod | 1.60e-12 | 52 |
future spinal cord | 1.60e-12 | 52 |
neural keel | 1.60e-12 | 52 |
viscus | 2.19e-12 | 19 |
regional part of brain | 3.22e-12 | 46 |
regional part of forebrain | 4.90e-12 | 39 |
forebrain | 4.90e-12 | 39 |
future forebrain | 4.90e-12 | 39 |
anterior neural tube | 1.29e-11 | 40 |
ectoderm-derived structure | 1.31e-10 | 95 |
ectoderm | 1.31e-10 | 95 |
presumptive ectoderm | 1.31e-10 | 95 |
neurectoderm | 4.34e-09 | 64 |
neural plate | 4.34e-09 | 64 |
presumptive neural plate | 4.34e-09 | 64 |
ecto-epithelium | 5.44e-09 | 73 |
pre-chordal neural plate | 1.30e-08 | 49 |