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FFCP PHASE1:Mm9::chr11:3189883..3189925,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56218
|EntrezGene=56218
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q5NBZ2,Q5NBY9
|UniProt=Q5NBZ2,Q5NBY9
|association_with_transcript=-70bp_to_ENSMUST00000094471,ENSMUST00000110043_5end
|association_with_transcript=-70bp_to_ENSMUST00000094471,ENSMUST00000110043_5end
|cluster_id=chr11:3189883..3189925,+
|description=CAGE_peak_1_at_Patz1_5end
|description=CAGE_peak_1_at_Patz1_5end
|id=chr11:3189883..3189925,+
|id=chr11:3189883..3189925,+
|ontology_enrichment_celltype=CL:0000221!5.48e-13!44;CL:0000133!5.48e-13!44;CL:0002319!8.31e-13!43;CL:0000540!1.15e-12!33;CL:0000047!1.15e-12!33;CL:0000031!1.15e-12!33;CL:0000404!1.15e-12!33;CL:0000117!1.15e-09!23;CL:0000337!1.15e-09!23;CL:0000393!4.40e-09!39;CL:0000211!4.40e-09!39;CL:0000055!5.45e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000221,5.48e-13,44;CL:0000133,5.48e-13,44;CL:0002319,8.31e-13,43;CL:0000540,1.15e-12,33;CL:0000047,1.15e-12,33;CL:0000031,1.15e-12,33;CL:0000404,1.15e-12,33;CL:0000117,1.15e-09,23;CL:0000337,1.15e-09,23;CL:0000393,4.40e-09,39;CL:0000211,4.40e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!7.72e-20!94;UBERON:0007811!2.90e-19!86;UBERON:0001017!5.80e-19!73;UBERON:0005743!5.80e-19!73;UBERON:0000073!1.50e-17!75;UBERON:0001016!1.50e-17!75;UBERON:0002346!9.54e-14!71;UBERON:0003075!9.54e-14!71;UBERON:0007284!9.54e-14!71;UBERON:0004121!1.04e-13!102;UBERON:0000924!1.04e-13!102;UBERON:0006601!1.04e-13!102;UBERON:0001049!4.83e-12!52;UBERON:0005068!4.83e-12!52;UBERON:0006241!4.83e-12!52;UBERON:0007135!4.83e-12!52;UBERON:0000033!6.05e-12!63;UBERON:0003056!1.86e-11!49;UBERON:0000955!1.38e-10!50;UBERON:0006238!1.38e-10!50;UBERON:0002616!3.23e-10!49;UBERON:0003080!1.89e-09!40;UBERON:0002780!2.48e-09!39;UBERON:0001890!2.48e-09!39;UBERON:0006240!2.48e-09!39;UBERON:0002020!6.89e-08!34;UBERON:0002370!2.08e-07!23;UBERON:0000974!2.08e-07!23;UBERON:0004807!2.08e-07!23;UBERON:0005058!2.08e-07!23;UBERON:0003351!2.08e-07!23;UBERON:0009113!2.08e-07!23;UBERON:0003295!2.08e-07!23;UBERON:0009722!2.08e-07!23;UBERON:0005562!2.08e-07!23;UBERON:0007690!2.08e-07!23;UBERON:0006562!8.76e-07!24;UBERON:0001557!8.76e-07!24;UBERON:0001042!8.76e-07!24;UBERON:0008814!8.76e-07!24;UBERON:0009145!8.76e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.80e-19,73;UBERON:0001016,1.50e-17,75;UBERON:0002346,4.71e-15,64;UBERON:0003075,4.71e-15,64;UBERON:0007284,4.71e-15,64;UBERON:0004121,1.60e-14,95;UBERON:0000924,1.60e-14,95;UBERON:0006601,1.60e-14,95;UBERON:0000073,3.75e-12,54;UBERON:0001049,4.83e-12,52;UBERON:0005068,4.83e-12,52;UBERON:0006241,4.83e-12,52;UBERON:0007135,4.83e-12,52;UBERON:0010314,1.23e-11,92;UBERON:0010371,1.75e-11,73;UBERON:0003056,1.86e-11,49;UBERON:0000955,1.57e-10,47;UBERON:0006238,1.57e-10,47;UBERON:0002616,3.69e-10,46;UBERON:0003080,1.89e-09,40;UBERON:0002780,2.48e-09,39;UBERON:0001890,2.48e-09,39;UBERON:0006240,2.48e-09,39;UBERON:0000153,3.14e-09,43;UBERON:0007811,2.54e-08,36;UBERON:0002020,6.89e-08,34;UBERON:0002370,2.08e-07,23;UBERON:0000974,2.08e-07,23;UBERON:0004807,2.08e-07,23;UBERON:0005058,2.08e-07,23;UBERON:0003351,2.08e-07,23;UBERON:0009113,2.08e-07,23;UBERON:0003295,2.08e-07,23;UBERON:0009722,2.08e-07,23;UBERON:0005562,2.08e-07,23;UBERON:0007690,2.08e-07,23;UBERON:0006562,8.76e-07,24;UBERON:0001557,8.76e-07,24;UBERON:0001042,8.76e-07,24;UBERON:0008814,8.76e-07,24;UBERON:0009145,8.76e-07,24
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1591035,12.6366248761507,9.61806161666556,9.82631536857799,8.90104686139817,8.84391976261094,2.87931536182433,3.6292192521702,6.21339313086926,1.69107881605257,18.2410186173654,19.8550188548517,17.8895093276524,19.3739735216597,18.9230860549672,20.1854450470697,15.754730566118,11.6393872312539,4.59009829569411,2.01621004380506,48.0336903354831,13.9880398550213,15.6120654890537,17.6692319249801,21.6622301757653,27.020664250252,29.3276896828724,27.1748730001222,26.3522434364665,29.0347933355549,32.0627268735153,47.0721563973004,33.4817208908347,35.9980858719232,7.25537227568676,2.44184548711471,2.87084341150322,1.34307693091263,13.7164611762855,4.129014459926,9.15758121336325,6.64541975145104,4.51414893631827,13.5540442228096,8.74617949363636,14.3223878359849,12.3734291287455,15.7568979547248,10.5755145634558,14.1754725048679,17.1122057225204,11.3285602246051,13.4617681055473,16.3984009182999,14.3648954424371,18.7806966329548,11.9122291363464,10.2710449687711,13.604419625301,13.7792971237001,11.9500333198559,9.62757628775446,9.8551912587881,9.12525479604863,11.5062068245506,10.2069243142172,10.0519489275645,9.41941690872058,11.4310485907938,11.8202012463753,12.1532808892134,7.41754621445952,9.56792980873583,10.6289468239479,7.0990322463735,10.7296285476294,11.046327664057,9.88148494360971,9.98452373121783,9.51225458938417,9.2074399003245,10.8643291076689,11.7839877048125,12.1007718486658,12.0175468498187,13.5046244245997,11.9301367713194,10.2240503820005,19.4852250791598,13.5680332898337,11.1732948105115,15.1117782334386,8.38247392654159,5.79669589051054
|phase1_expression=17.135926640213,1.74487703819681,0.909998478779072,1.81478526784098,2.00358291978539,3.86122325397347,5.84031601488814,20.6597317506522,12.67098499365,14.5120006319636,4.28044920563762,8.29630453551499,20.2016861318823,21.7676802023304,6.99530499812892,6.07425802169478,3.49780939064073,17.5081501773822,24.5434836154272,19.9463136345074,7.56885282344521,15.0922245825346,12.27639008953,4.15980299262857,4.5881856213434,1.72269589234506,3.4460959692726,5.17130958446134,3.04037471130198,2.77233142735924,4.43461021310609,31.7515336729816,40.5942759805816,47.5445043046316,6.35473563452804,5.81821258754723,7.9626048942324,2.09265815368454,3.1253413780952,5.75876118371178,2.94115744015507,2.73218193983378,1.94204141212461,8.05739635043695,8.00877756634165,7.34187008646726,17.9950009200049,24.6368426709905,12.0827400503959,17.4986909166855,16.6583841734181,20.125359011096,14.9326519391385,28.2891235384424,21.1739093459752,3.8588915405392,10.601737277734,8.25075347643908,25.6941905291689,33.3264316941381,38.0298842103708,12.5372476865579,11.5608323494448,7.64914759689189,8.89979726310277,7.8152812644071,20.9720077362883,22.6688800139717,25.8187134648109,41.7168349444924,33.8623187775725,19.9955689082663,22.9703282589678,27.5604298233647,31.2456235519451,48.7185956903311,18.7196997698961,13.0241084846891,12.1349161272432,33.4991170834692,26.805879575506,22.3992749339407,11.4465029590566,19.6966913511088,17.4190002465564,24.1595440088408,19.362548588678,29.2647129945722,5.2251073399897,5.89458168832927,11.3047150593654,3.44169550792555,0.679971333707751,1.07940638327563,1.94932925234301,3.13618820968135,6.88177658645584,7.49893419343454,5.71529210126311,3.5333957451034,18.0279577314151,14.115912515575,30.5766287647975,56.8853362522665,3.89683873820185,4.05375784760158,3.53867111510348,6.2801133845483,4.40194402200192,11.7269289861212,17.1750473498474,9.13396434936424,10.8389283710347,9.04335843315735,13.7578787348775,9.42499434972566,5.19109432242185,6.65157041831594,7.07688441559899,11.8089800461609,7.28777010919299,3.87900202508178,3.72783522436244,20.7874365878198,20.1068838540917,4.34276993854605,14.0183695671927,6.59893004092748,9.65733725755292,16.4769703345305,23.7900313465686,29.654427098636,11.6462294528825,8.95004100656157,13.2984348518118,15.2506787283692,20.6733908616142,9.33052279575698,14.1524744722858,9.6803253707778,19.778307330331,20.2313851901456,15.6654052930654,16.7282347797644,26.1260156741099,18.1921482804487,28.9538328889562,20.6962696591213,20.2633913356872,22.3145174598027,22.5217438929855,17.9740500590611,13.9023624612799,12.1888258282758,10.4948889568051,18.9082553477569,7.72434506044558,9.77922047035918,9.66155897945015,16.9843133479112,14.3060896588469,11.3439098720439,15.8618972842091,11.6090896730968,13.5755059340893,12.7893669612724,12.3405764643825,13.5447797145917,14.6458266422998,7.38753588355929,10.4578764314154,10.5263990946239,10.7579556492615,11.4075455946316,14.5100064509248,22.0215870491669,1.98251269790279,5.28901133327089,18.9826542976358,19.9723537799977,14.9486255133628,11.0925938542838,13.787438718382,7.98947629672748,3.79623249235609,9.22314146454461,8.79673230800943,7.95825888164603,8.38345574612217,0,4.53889904736858,3.58454291857861,19.7254616991205,13.3670759753383,22.5415471346161,15.8848035719345,18.6194387680921,18.5859922709344,15.3032419840703,11.8088118383682,9.10592621479974,8.39100714668244,4.15033677922008,7.34118465150814,6.6830058338489,5.8464149220062,7.1001042485976,8.20002343158217,7.89340140522401,5.75392274901621,9.89024883327716,5.21666685057355,1.43768206527355,7.44281895337007,7.17686648163489,5.05157755894223,2.33216637578486,4.3419916922703,18.2905658264939,18.0016841181961,15.1557428091084,18.6719594352707,19.9486711045227,14.0705256251125,20.2337094753112,19.9036320814955,19.7043930132739,17.9386398615508,20.5696651568158,15.4031515832794,11.7425787668809,10.5593812764503,9.04747703635634,3.26343410291226,0.983528546038072,2.75936746304733,9.63303539926752,11.1351102262593,7.37707254195039,8.58401152494868,15.4599027513966,19.5219372148319,25.6353843302031,23.6579109973027,24.5078541490634,21.5138163399513,18.2164815753702,25.1340037803728,18.9738133414331,21.2072068838393,15.8972895433261,19.5872164033981,22.1526264720863,14.1874305756381,1.32745138339963,18.6941089839336,15.7208249621671,9.24164890803901,8.85905678642318,8.30074899448604,8.5281336745513,13.8142817201452,10.3384239731569,7.9009189483954,4.21674434299995,5.15677716240934,19.7454971337197,21.6073312837572,26.5185301754647,26.5777923439174,20.9261475697883,28.8957484515354,21.72047071948,33.4911444026059,4.69343416127421,3.81297727554876,4.85162475720916,6.92522262354216,11.4639742954093,6.45348296731268,6.68485126417564,6.56563598980245,6.41257840585672,13.3506217447567,9.56876932467975,20.2259130603958,12.5932278611404,5.83942216714542,6.97140561377228,11.2101304871196,14.9581018394593,10.4963589242744,12.1615976947893,3.81868247206045,20.8781755763549,11.3858901591035,12.6366248761507,9.61806161666556,9.82631536857799,8.90104686139817,8.84391976261094,2.87931536182433,3.6292192521702,6.21339313086926,1.69107881605257,18.2410186173654,19.8550188548517,17.8895093276524,19.3739735216597,18.9230860549672,20.1854450470697,15.754730566118,11.6393872312539,4.59009829569411,2.01621004380506,48.0336903354831,13.9880398550213,15.6120654890537,17.6692319249801,21.6622301757653,27.020664250252,29.3276896828724,27.1748730001222,26.3522434364665,29.0347933355549,32.0627268735153,47.0721563973004,33.4817208908347,35.9980858719232,7.25537227568676,2.44184548711471,2.87084341150322,1.34307693091263,13.7164611762855,4.129014459926,9.15758121336325,6.64541975145104,4.51414893631827,13.5540442228096,8.74617949363636,14.3223878359849,12.3734291287455,15.7568979547248,10.5755145634558,14.1754725048679,17.1122057225204,11.3285602246051,13.4617681055473,16.3984009182999,14.3648954424371,18.7806966329548,11.9122291363464,10.2710449687711,13.604419625301,13.7792971237001,11.9500333198559,9.62757628775446,9.8551912587881,9.12525479604863,11.5062068245506,10.2069243142172,10.0519489275645,9.41941690872058,11.4310485907938,11.8202012463753,12.1532808892134,7.41754621445952,9.56792980873583,10.6289468239479,7.0990322463735,10.7296285476294,11.046327664057,9.88148494360971,9.98452373121783,9.51225458938417,9.2074399003245,10.8643291076689,11.7839877048125,12.1007718486658,12.0175468498187,13.5046244245997,11.9301367713194,10.2240503820005,19.4852250791598,13.5680332898337,11.1732948105115,15.1117782334386,8.38247392654159,5.79669589051054
|short_description=p1@Patz1
|short_description=p1@Patz1
}}
}}

Latest revision as of 07:07, 27 September 2015

Short description:p1@Patz1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Patz1_5end
Coexpression cluster:NA
Association with transcript: -70bp_to_ENSMUST00000094471, ENSMUST00000110043_5end
EntrezGene:Patz1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Patz1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G640.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C224.64
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I928.29
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C325.69
Mouse Granule cells, donor2.CNhs12357.11731-123E333.33
Mouse Granule cells, donor3.CNhs12108.11636-122C738.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C820.97
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.82
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F541.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.86
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D648.72
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.26
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F95.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D711.73
adrenal gland, embryo E14.CNhs11038.406-44C517.18
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C113.76
adrenal gland, neonate N25.CNhs11223.1377-27I39.42
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B220.79
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.66
corpora quadrigemina, adult.CNhs10501.16-22A416.48
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F129.65
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B215.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C619.78
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C915.67
eyeball, embryo E17.CNhs11023.1261-18D416.73
eyeball, neonate N00.CNhs11207.633-15C626.13
eyeball, neonate N01.CNhs11140.1532-43E718.19
eyeball, neonate N02.CNhs11205.1551-44G828.95
eyeball, neonate N16.CNhs11188.777-19A220.70
forelimb, embryo E11.CNhs10596.335-25E220.26
forelimb, embryo E12.CNhs10600.359-14H222.31
forelimb, embryo E13.CNhs10589.384-1E222.52
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B510.49
gonad, embryo E13.CNhs11044.1564-45I618.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.66
heart, embryo E11.CNhs10586.331-24E916.98
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I911.34
heart, embryo E14.CNhs10597.403-26D415.86
heart, embryo E15.CNhs11017.431-16C811.61
heart, embryo E16.CNhs11021.457-17C613.58
heart, embryo E17.CNhs11025.479-18E512.79
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E313.54
heart, neonate N03.CNhs11221.1349-25I214.65
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G110.46
heart, neonate N20.CNhs11127.821-26I610.53
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E814.51
hippocampus, neonate N00.CNhs11228.627-43G122.02
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I518.98
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D814.95
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D313.79
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I919.73
kidney, embryo E15.CNhs10997.434-16F813.37
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I215.88
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G718.59
kidney, neonate N10.CNhs11206.758-6D515.30
kidney, neonate N20.CNhs11113.832-19I111.81
kidney, neonate N25.CNhs11122.1353-25F39.11
kidney, neonate N30.CNhs11203.1385-42H18.39
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E15.85
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F49.89
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B118.29
lung, embryo E12.CNhs10522.354-16G218.00
lung, embryo E14.CNhs10604.404-26F815.16
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A614.07
lung, embryo E18.CNhs10583.1287-20I620.23
lung, neonate N00.CNhs11224.640-42C619.90
lung, neonate N06.CNhs11212.683-20E519.70
lung, neonate N07.CNhs11111.715-19A317.94
lung, neonate N10.CNhs11219.750-23E620.57
lung, neonate N20.CNhs11109.822-18A415.40
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H210.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.46
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E325.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.13
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I715.90
ovary, embryo E18.CNhs11040.505-44H719.59
ovary, neonate N00.CNhs11217.1299-22I422.15
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F418.69
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E59.24
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G819.75
pituitary gland, embryo E12.CNhs11018.346-16E621.61
pituitary gland, embryo E13.CNhs11009.370-44C726.52
pituitary gland, embryo E14.CNhs11037.398-44A526.58
pituitary gland, embryo E15.CNhs10592.427-16B920.93
pituitary gland, embryo E16.CNhs11036.449-43F628.90
pituitary gland, embryo E17.CNhs11039.1265-44F521.72
pituitary gland, neonate N00.CNhs11190.1308-22E933.49
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C36.93
skin, neonate N00.CNhs11124.650-25G411.46
skin, neonate N03.CNhs11215.662-22H36.45
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C913.35
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C120.23
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G311.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.16
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E320.88
stomach, embryo E15.CNhs10603.1252-16G811.39
stomach, embryo E16.CNhs11022.459-17D412.64
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B88.90
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I13.63
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F518.24
testis, embryo E15.CNhs11034.443-27C519.86
testis, embryo E16.CNhs11033.470-26G517.89
testis, embryo E17.CNhs11029.486-18I519.37
testis, embryo E18.CNhs11027.503-18G518.92
testis, neonate N00.CNhs11189.1300-22B720.19
testis, neonate N07.CNhs11222.726-26I415.75
testis, neonate N10.CNhs11204.763-44D911.64
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B548.03
thymus, embryo E14.CNhs11041.402-44I413.99
thymus, embryo E15.CNhs11005.430-45I215.61
thymus, embryo E16.CNhs11002.456-26C517.67
thymus, embryo E17.CNhs10581.478-18C121.66
thymus, embryo E18.CNhs10595.1273-19G427.02
thymus, neonate N02.CNhs11181.1541-43F829.33
thymus, neonate N03.CNhs11137.2104-43C727.17
thymus, neonate N06.CNhs11197.681-26C426.35
thymus, neonate N07.CNhs11211.713-19D329.03
thymus, neonate N10.CNhs11194.748-24E432.06
thymus, neonate N20.CNhs11186.820-7A247.07
thymus, neonate N25.CNhs11125.1362-25G733.48
thymus, neonate N30.CNhs11132.1393-42G236.00
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I816.40
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H218.78
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F213.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.93
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I519.49
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C615.11
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell5.48e-1344
neurectodermal cell5.48e-1344
neural cell8.31e-1343
neuron1.15e-1233
neuronal stem cell1.15e-1233
neuroblast1.15e-1233
electrically signaling cell1.15e-1233
CNS neuron (sensu Vertebrata)1.15e-0923
neuroblast (sensu Vertebrata)1.15e-0923
electrically responsive cell4.40e-0939
electrically active cell4.40e-0939

Uber anatomy
Ontology termp-valuen
central nervous system5.80e-1973
nervous system1.50e-1775
neurectoderm4.71e-1564
neural plate4.71e-1564
presumptive neural plate4.71e-1564
ectoderm-derived structure1.60e-1495
ectoderm1.60e-1495
presumptive ectoderm1.60e-1495
regional part of nervous system3.75e-1254
neural tube4.83e-1252
neural rod4.83e-1252
future spinal cord4.83e-1252
neural keel4.83e-1252
structure with developmental contribution from neural crest1.23e-1192
ecto-epithelium1.75e-1173
pre-chordal neural plate1.86e-1149
brain1.57e-1047
future brain1.57e-1047
regional part of brain3.69e-1046
anterior neural tube1.89e-0940
regional part of forebrain2.48e-0939
forebrain2.48e-0939
future forebrain2.48e-0939
anterior region of body3.14e-0943
craniocervical region2.54e-0836
gray matter6.89e-0834
thymus2.08e-0723
neck2.08e-0723
respiratory system epithelium2.08e-0723
hemolymphoid system gland2.08e-0723
pharyngeal epithelium2.08e-0723
thymic region2.08e-0723
pharyngeal gland2.08e-0723
entire pharyngeal arch endoderm2.08e-0723
thymus primordium2.08e-0723
early pharyngeal endoderm2.08e-0723
pharynx8.76e-0724
upper respiratory tract8.76e-0724
chordate pharynx8.76e-0724
pharyngeal arch system8.76e-0724
pharyngeal region of foregut8.76e-0724
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