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FFCP PHASE1:Mm9::chr8:108089806..108089814,-: Difference between revisions

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{{FFCP|EntrezGene=11972|HGNC=|UniProt=P51863|association_with_transcript=125bp_to_NM_013477,uc009ndg.1_5end|description=CAGE_peak_4_at_Atp6v0d1_5end|id=chr8:108089806..108089814,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.51e-16!73;UBERON:0005743!9.51e-16!73;UBERON:0001049!1.23e-15!52;UBERON:0005068!1.23e-15!52;UBERON:0006241!1.23e-15!52;UBERON:0007135!1.23e-15!52;UBERON:0000073!1.23e-15!75;UBERON:0001016!1.23e-15!75;UBERON:0002346!5.98e-15!71;UBERON:0003075!5.98e-15!71;UBERON:0007284!5.98e-15!71;UBERON:0003056!6.48e-14!49;UBERON:0002780!2.04e-13!39;UBERON:0001890!2.04e-13!39;UBERON:0006240!2.04e-13!39;UBERON:0004121!3.36e-13!102;UBERON:0000924!3.36e-13!102;UBERON:0006601!3.36e-13!102;UBERON:0003080!4.17e-13!40;UBERON:0000033!1.06e-12!63;UBERON:0002020!1.09e-12!34;UBERON:0002616!1.58e-12!49;UBERON:0000955!3.52e-12!50;UBERON:0006238!3.52e-12!50;UBERON:0002791!3.59e-10!29;UBERON:0003528!3.59e-10!29;UBERON:0001893!3.59e-10!29;UBERON:0002619!1.15e-09!17;UBERON:0000956!4.63e-09!21;UBERON:0001869!4.63e-09!21;UBERON:0000203!4.63e-09!21;UBERON:0002021!5.87e-08!10;UBERON:0000411!5.87e-08!10;UBERON:0001950!5.87e-08!10;UBERON:0000153!9.32e-08!94;UBERON:0007811!2.13e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.63e-20,52;UBERON:0005068,2.63e-20,52;UBERON:0006241,2.63e-20,52;UBERON:0007135,2.63e-20,52;UBERON:0001017,8.65e-20,73;UBERON:0002346,1.21e-19,64;UBERON:0003075,1.21e-19,64;UBERON:0007284,1.21e-19,64;UBERON:0010371,3.71e-19,73;UBERON:0000073,4.10e-19,54;UBERON:0001016,6.90e-19,75;UBERON:0002020,2.41e-18,34;UBERON:0002780,2.41e-18,39;UBERON:0001890,2.41e-18,39;UBERON:0006240,2.41e-18,39;UBERON:0003056,2.47e-18,49;UBERON:0004121,2.78e-18,95;UBERON:0000924,2.78e-18,95;UBERON:0006601,2.78e-18,95;UBERON:0003080,1.21e-17,40;UBERON:0002616,1.19e-16,46;UBERON:0000955,4.41e-16,47;UBERON:0006238,4.41e-16,47;UBERON:0003528,5.74e-14,29;UBERON:0002791,5.74e-14,29;UBERON:0001893,5.74e-14,29;UBERON:0002021,3.16e-13,10;UBERON:0000411,3.16e-13,10;UBERON:0001950,3.16e-13,10;UBERON:0010314,4.81e-13,92;UBERON:0002619,2.40e-12,17;UBERON:0000956,8.69e-11,21;UBERON:0001869,8.69e-11,21;UBERON:0000203,8.69e-11,21|phase1_expression=2.88267924788629,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,4.08287294239834,4.21316147379588,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,1.36609096991689,0,0.755380907853464,1.4192770370732,0.367093504323363,0,0.65407546914134,1.09843091367236,0.972149495371417,0.279972843250725,0,6.37573903019398,2.90144856804538,2.35265659399725,0.771778308107841,0,0,3.03474691289397,2.11596391708813,1.26766280701236,0.677689064138264,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,3.07374644257244,0.622137673850866,0.135005938331691,0.630974884054146,2.28520787523043,2.87129103237098,0.734944795289724,1.15014565221884,0.919218786610021,0,0.510749352340751,0.768032666281217,3.03338461779446,2.37867873366265,2.6045668527838,0.279182999001381,0,1.06958773443767,1.76777151284201,2.13557521198654,2.79599168737951,0.832988126665025,0.302286240427142,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.852151612890289,0.259786004602869,0.70667914902068,2.11265129665021,1.28326477414318,0,0,0,0,0,0.68510327831436,0.517875767294343,0.445326417194474,0.346970653532272,1.21786191324856,0.461230994512117,0.452167921657868,1.05829836422134,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.878342391034642,2.93225389538837,1.02182822083437,0.239630249011841,0.599902730993408,0.381210681219194,0.449371918214468,2.74500361691176,1.25654352112864,3.47648640384553,3.06858548796397,0.41557608911912,1.62241263067758,1.2220723662038,0.622034853050465,5.55990068554084,0,0.520481771850815,1.14951052216736,0.540186389416048,1.05493372485001,2.38127747029647,1.2811372028485,1.21812241927647,0.776110112217047,0.215567992932842,0.378212160335639,0.703804496655795,0.657587197282725,1.11218899690239,1.0447564995665,0.61734640922383,0.398068533636986,2.80885274925294,0.51469581422943,0.284163499395593,0.621377317606506,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.822799249567402,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,2.52347938276953,2.98423375899925,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0.597423819763102,1.13800740571849,0.228497025219458,0,0.203651327845314,0.193952487167626,0.49095073923223,0.505892296994058,0.295220295959204,0.941992367048249,0.616985819609003,0.2964526270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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11972
|HGNC=
|TSSclassifier=NA
|UniProt=P51863
|association_with_transcript=125bp_to_NM_013477,uc009ndg.1_5end
|cluster_id=chr8:108089806..108089814,-
|description=CAGE_peak_4_at_Atp6v0d1_5end
|id=chr8:108089806..108089814,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.51e-16!73;UBERON:0005743!9.51e-16!73;UBERON:0001049!1.23e-15!52;UBERON:0005068!1.23e-15!52;UBERON:0006241!1.23e-15!52;UBERON:0007135!1.23e-15!52;UBERON:0000073!1.23e-15!75;UBERON:0001016!1.23e-15!75;UBERON:0002346!5.98e-15!71;UBERON:0003075!5.98e-15!71;UBERON:0007284!5.98e-15!71;UBERON:0003056!6.48e-14!49;UBERON:0002780!2.04e-13!39;UBERON:0001890!2.04e-13!39;UBERON:0006240!2.04e-13!39;UBERON:0004121!3.36e-13!102;UBERON:0000924!3.36e-13!102;UBERON:0006601!3.36e-13!102;UBERON:0003080!4.17e-13!40;UBERON:0000033!1.06e-12!63;UBERON:0002020!1.09e-12!34;UBERON:0002616!1.58e-12!49;UBERON:0000955!3.52e-12!50;UBERON:0006238!3.52e-12!50;UBERON:0002791!3.59e-10!29;UBERON:0003528!3.59e-10!29;UBERON:0001893!3.59e-10!29;UBERON:0002619!1.15e-09!17;UBERON:0000956!4.63e-09!21;UBERON:0001869!4.63e-09!21;UBERON:0000203!4.63e-09!21;UBERON:0002021!5.87e-08!10;UBERON:0000411!5.87e-08!10;UBERON:0001950!5.87e-08!10;UBERON:0000153!9.32e-08!94;UBERON:0007811!2.13e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.63e-20,52;UBERON:0005068,2.63e-20,52;UBERON:0006241,2.63e-20,52;UBERON:0007135,2.63e-20,52;UBERON:0001017,8.65e-20,73;UBERON:0002346,1.21e-19,64;UBERON:0003075,1.21e-19,64;UBERON:0007284,1.21e-19,64;UBERON:0010371,3.71e-19,73;UBERON:0000073,4.10e-19,54;UBERON:0001016,6.90e-19,75;UBERON:0002020,2.41e-18,34;UBERON:0002780,2.41e-18,39;UBERON:0001890,2.41e-18,39;UBERON:0006240,2.41e-18,39;UBERON:0003056,2.47e-18,49;UBERON:0004121,2.78e-18,95;UBERON:0000924,2.78e-18,95;UBERON:0006601,2.78e-18,95;UBERON:0003080,1.21e-17,40;UBERON:0002616,1.19e-16,46;UBERON:0000955,4.41e-16,47;UBERON:0006238,4.41e-16,47;UBERON:0003528,5.74e-14,29;UBERON:0002791,5.74e-14,29;UBERON:0001893,5.74e-14,29;UBERON:0002021,3.16e-13,10;UBERON:0000411,3.16e-13,10;UBERON:0001950,3.16e-13,10;UBERON:0010314,4.81e-13,92;UBERON:0002619,2.40e-12,17;UBERON:0000956,8.69e-11,21;UBERON:0001869,8.69e-11,21;UBERON:0000203,8.69e-11,21
|phase1_expression=2.88267924788629,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,4.08287294239834,4.21316147379588,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,1.36609096991689,0,0.755380907853464,1.4192770370732,0.367093504323363,0,0.65407546914134,1.09843091367236,0.972149495371417,0.279972843250725,0,6.37573903019398,2.90144856804538,2.35265659399725,0.771778308107841,0,0,3.03474691289397,2.11596391708813,1.26766280701236,0.677689064138264,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,3.07374644257244,0.622137673850866,0.135005938331691,0.630974884054146,2.28520787523043,2.87129103237098,0.734944795289724,1.15014565221884,0.919218786610021,0,0.510749352340751,0.768032666281217,3.03338461779446,2.37867873366265,2.6045668527838,0.279182999001381,0,1.06958773443767,1.76777151284201,2.13557521198654,2.79599168737951,0.832988126665025,0.302286240427142,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0.852151612890289,0.259786004602869,0.70667914902068,2.11265129665021,1.28326477414318,0,0,0,0,0,0.68510327831436,0.517875767294343,0.445326417194474,0.346970653532272,1.21786191324856,0.461230994512117,0.452167921657868,1.05829836422134,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.878342391034642,2.93225389538837,1.02182822083437,0.239630249011841,0.599902730993408,0.381210681219194,0.449371918214468,2.74500361691176,1.25654352112864,3.47648640384553,3.06858548796397,0.41557608911912,1.62241263067758,1.2220723662038,0.622034853050465,5.55990068554084,0,0.520481771850815,1.14951052216736,0.540186389416048,1.05493372485001,2.38127747029647,1.2811372028485,1.21812241927647,0.776110112217047,0.215567992932842,0.378212160335639,0.703804496655795,0.657587197282725,1.11218899690239,1.0447564995665,0.61734640922383,0.398068533636986,2.80885274925294,0.51469581422943,0.284163499395593,0.621377317606506,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.822799249567402,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,2.52347938276953,2.98423375899925,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0.597423819763102,1.13800740571849,0.228497025219458,0,0.203651327845314,0.193952487167626,0.49095073923223,0.505892296994058,0.295220295959204,0.941992367048249,0.616985819609003,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,3.08056930872567,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.554259570499814,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.714130922658041,0.585400943573396,0.630540576424764,1.10732344824387,0.318909537314974,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0.275936746304732,0.80275294993896,1.17211686592203,0.983609672260053,0,0.315508219416257,0.390438744296638,0.646270193198397,1.19484398976276,0,0.566153061577665,0.809621403349789,1.46127928955656,1.97643888973262,0.321321316421807,0.709700426041343,0.712262414669021,0.81443479676788,0.494910368917606,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,0.363533729477506,1.42598951353889,0,1.05418608574999,0,1.36175842301515,1.08036656418786,1.68166288917581,1.07168517515796,1.41872186913819,2.14042581122485,0.987294123612726,3.34911444026059,0.938686832254841,0.63549621259146,1.32317038832977,0,1.61464426695906,0.120625849856312,0.119372344003136,0.492422699235184,0,0.370850604021019,0,0.619160603889667,0.185194527369712,0,0.410082683163076,0.457556346413045,1.86976272993241,0.839708713941948,1.38199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,1.40510874733071,0,0,0,0.56369293868419,0.598066184175915,0.496375471371293,0.972255941720238,0.645799117388655,0.506868376472335,0.821500670520278,0.5208175393758,0.838874755405687,0.966336483304024,0,0,0.202725215290164,0.410843828659309,0.51968329191118,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.487289403698762,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.538283139656854,0.503653849092235,0,0,1.09890974560359,0.214368379079066,0,5.0827665835536,5.52390283808612,5.15605962095457,5.67115501734169,4.7955776383945,2.2661816921691,4.05013500139084,4.95353323546643,4.53142408984205,4.65984280576638,0.62272408550506,0.399024873401031,1.19513524027894,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0,0.25347929989024,0.565879024158229,0.561849044819294,0.512201219238954,0.689225627467359,0.476293691283074,0.347652977834566,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.532427418478012,0.476872379894642,1.16277133305863,0.658765662907314,0.846146078916765,1.46342378298218,0,0.543216455383447,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,1.07435527024149,0.765153328275374,1.54413993383661,0
|short_description=p4@Atp6v0d1
}}

Latest revision as of 07:26, 27 September 2015

Short description:p4@Atp6v0d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Atp6v0d1_5end
Coexpression cluster:NA
Association with transcript: 125bp_to_NM_013477, uc009ndg.1_5end
EntrezGene:Atp6v0d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Atp6v0d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neural tube2.63e-2052
neural rod2.63e-2052
future spinal cord2.63e-2052
neural keel2.63e-2052
central nervous system8.65e-2073
neurectoderm1.21e-1964
neural plate1.21e-1964
presumptive neural plate1.21e-1964
ecto-epithelium3.71e-1973
regional part of nervous system4.10e-1954
nervous system6.90e-1975
gray matter2.41e-1834
regional part of forebrain2.41e-1839
forebrain2.41e-1839
future forebrain2.41e-1839
pre-chordal neural plate2.47e-1849
ectoderm-derived structure2.78e-1895
ectoderm2.78e-1895
presumptive ectoderm2.78e-1895
anterior neural tube1.21e-1740
regional part of brain1.19e-1646
brain4.41e-1647
future brain4.41e-1647
brain grey matter5.74e-1429
regional part of telencephalon5.74e-1429
telencephalon5.74e-1429
occipital lobe3.16e-1310
visual cortex3.16e-1310
neocortex3.16e-1310
structure with developmental contribution from neural crest4.81e-1392
regional part of cerebral cortex2.40e-1217
cerebral cortex8.69e-1121
cerebral hemisphere8.69e-1121
pallium8.69e-1121
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