FFCP PHASE1:Mm9::chr4:97248473..97248496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18027 | |EntrezGene=18027 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1761 | |MCL_coexpression_id=1761 | ||
|TSSclassifier=NA | |||
|UniProt=Q02780,Q3UTK6 | |UniProt=Q02780,Q3UTK6 | ||
|association_with_transcript=-137bp_to_NM_001122952,uc008tty.2_5end | |association_with_transcript=-137bp_to_NM_001122952,uc008tty.2_5end | ||
|cluster_id=chr4:97248473..97248496,+ | |||
|description=CAGE_peak_16_at_Nfia_5end | |description=CAGE_peak_16_at_Nfia_5end | ||
|id=chr4:97248473..97248496,+ | |id=chr4:97248473..97248496,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.08e-13!44;CL:0000133!2.08e-13!44;CL:0002319!8.26e-13!43;CL:0000117!1.06e-11!23;CL:0000337!1.06e-11!23;CL:0000540!8.20e-11!33;CL:0000047!8.20e-11!33;CL:0000031!8.20e-11!33;CL:0000404!8.20e-11!33;CL:0000055!4.45e-09!50;CL:0000393!1.67e-07!39;CL:0000211!1.67e-07!39 | |ontology_enrichment_celltype=CL:0000221!2.08e-13!44;CL:0000133!2.08e-13!44;CL:0002319!8.26e-13!43;CL:0000117!1.06e-11!23;CL:0000337!1.06e-11!23;CL:0000540!8.20e-11!33;CL:0000047!8.20e-11!33;CL:0000031!8.20e-11!33;CL:0000404!8.20e-11!33;CL:0000055!4.45e-09!50;CL:0000393!1.67e-07!39;CL:0000211!1.67e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-12,23;CL:0000337,2.48e-12,23;CL:0000221,8.94e-12,44;CL:0000133,8.94e-12,44;CL:0002319,4.91e-11,43;CL:0000540,5.79e-09,33;CL:0000047,5.79e-09,33;CL:0000031,5.79e-09,33;CL:0000404,5.79e-09,33;CL:0002609,5.07e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.14e-25!63;UBERON:0004121!1.05e-23!102;UBERON:0000924!1.05e-23!102;UBERON:0006601!1.05e-23!102;UBERON:0001017!3.12e-22!73;UBERON:0005743!3.12e-22!73;UBERON:0000073!1.54e-21!75;UBERON:0001016!1.54e-21!75;UBERON:0002346!9.74e-20!71;UBERON:0003075!9.74e-20!71;UBERON:0007284!9.74e-20!71;UBERON:0000153!5.75e-19!94;UBERON:0003056!5.77e-19!49;UBERON:0007811!2.13e-18!86;UBERON:0001049!1.20e-17!52;UBERON:0005068!1.20e-17!52;UBERON:0006241!1.20e-17!52;UBERON:0007135!1.20e-17!52;UBERON:0000955!7.31e-16!50;UBERON:0006238!7.31e-16!50;UBERON:0002616!4.33e-15!49;UBERON:0002020!4.97e-13!34;UBERON:0003080!2.20e-12!40;UBERON:0002780!8.00e-12!39;UBERON:0001890!8.00e-12!39;UBERON:0006240!8.00e-12!39;UBERON:0000020!3.09e-10!12;UBERON:0001032!3.09e-10!12;UBERON:0004456!3.09e-10!12;UBERON:0002791!4.62e-10!29;UBERON:0003528!4.62e-10!29;UBERON:0001893!4.62e-10!29;UBERON:0001444!7.70e-09!11;UBERON:0000970!2.20e-08!9;UBERON:0000019!2.20e-08!9;UBERON:0000047!2.20e-08!9;UBERON:0004088!2.20e-08!9;UBERON:0002104!2.20e-08!9;UBERON:0001456!2.20e-08!9;UBERON:0003072!2.20e-08!9;UBERON:0003071!2.20e-08!9;UBERON:0004128!2.20e-08!9;UBERON:0005085!1.91e-07!13;UBERON:0000956!3.71e-07!21;UBERON:0001869!3.71e-07!21;UBERON:0000203!3.71e-07!21 | |ontology_enrichment_uberon=UBERON:0000033!5.14e-25!63;UBERON:0004121!1.05e-23!102;UBERON:0000924!1.05e-23!102;UBERON:0006601!1.05e-23!102;UBERON:0001017!3.12e-22!73;UBERON:0005743!3.12e-22!73;UBERON:0000073!1.54e-21!75;UBERON:0001016!1.54e-21!75;UBERON:0002346!9.74e-20!71;UBERON:0003075!9.74e-20!71;UBERON:0007284!9.74e-20!71;UBERON:0000153!5.75e-19!94;UBERON:0003056!5.77e-19!49;UBERON:0007811!2.13e-18!86;UBERON:0001049!1.20e-17!52;UBERON:0005068!1.20e-17!52;UBERON:0006241!1.20e-17!52;UBERON:0007135!1.20e-17!52;UBERON:0000955!7.31e-16!50;UBERON:0006238!7.31e-16!50;UBERON:0002616!4.33e-15!49;UBERON:0002020!4.97e-13!34;UBERON:0003080!2.20e-12!40;UBERON:0002780!8.00e-12!39;UBERON:0001890!8.00e-12!39;UBERON:0006240!8.00e-12!39;UBERON:0000020!3.09e-10!12;UBERON:0001032!3.09e-10!12;UBERON:0004456!3.09e-10!12;UBERON:0002791!4.62e-10!29;UBERON:0003528!4.62e-10!29;UBERON:0001893!4.62e-10!29;UBERON:0001444!7.70e-09!11;UBERON:0000970!2.20e-08!9;UBERON:0000019!2.20e-08!9;UBERON:0000047!2.20e-08!9;UBERON:0004088!2.20e-08!9;UBERON:0002104!2.20e-08!9;UBERON:0001456!2.20e-08!9;UBERON:0003072!2.20e-08!9;UBERON:0003071!2.20e-08!9;UBERON:0004128!2.20e-08!9;UBERON:0005085!1.91e-07!13;UBERON:0000956!3.71e-07!21;UBERON:0001869!3.71e-07!21;UBERON:0000203!3.71e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.43e-25,95;UBERON:0000924,8.43e-25,95;UBERON:0006601,8.43e-25,95;UBERON:0002346,1.24e-23,64;UBERON:0003075,1.24e-23,64;UBERON:0007284,1.24e-23,64;UBERON:0010371,1.04e-21,73;UBERON:0001017,1.91e-19,73;UBERON:0001016,1.50e-18,75;UBERON:0003056,2.03e-18,49;UBERON:0001049,2.23e-16,52;UBERON:0005068,2.23e-16,52;UBERON:0006241,2.23e-16,52;UBERON:0007135,2.23e-16,52;UBERON:0000073,2.65e-16,54;UBERON:0010314,3.41e-15,92;UBERON:0000020,1.98e-14,12;UBERON:0001032,1.98e-14,12;UBERON:0004456,1.98e-14,12;UBERON:0002020,1.38e-13,34;UBERON:0000033,5.25e-13,13;UBERON:0000955,1.39e-12,47;UBERON:0006238,1.39e-12,47;UBERON:0000970,1.10e-11,9;UBERON:0000019,1.10e-11,9;UBERON:0000047,1.10e-11,9;UBERON:0010312,1.10e-11,9;UBERON:0004088,1.10e-11,9;UBERON:0002104,1.10e-11,9;UBERON:0001456,1.10e-11,9;UBERON:0003072,1.10e-11,9;UBERON:0004128,1.10e-11,9;UBERON:0003071,1.10e-11,9;UBERON:0002616,1.13e-11,46;UBERON:0005085,4.99e-11,13;UBERON:0001444,5.52e-11,11;UBERON:0003080,3.51e-10,40;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0002780,1.68e-09,39;UBERON:0001890,1.68e-09,39;UBERON:0006240,1.68e-09,39;UBERON:0000956,4.00e-08,21;UBERON:0001869,4.00e-08,21;UBERON:0000203,4.00e-08,21;UBERON:0003076,1.24e-07,12;UBERON:0003057,1.24e-07,12;UBERON:0002240,4.52e-07,6;UBERON:0005174,4.52e-07,6;UBERON:0001137,4.52e-07,6 | |||
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.67983705950435,2.87505128729943,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,1.19840044207362,1.92109152660777,4.97710139080693,3.64516033495565,5.67877395648731,2.57085885963423,2.65042249141936,2.81728838194394,2.1086003624012,6.43453150627015,2.20231761998777,0.766124028511126,1.22885226604995,1.84640802822271,1.46380229763855,2.08365348222704,0.837548997004143,0.56276261003168,0.916789486660861,1.76777151284201,2.27794689278565,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0.969750506270444,0,1.17112318804619,0.83778682725382,0,0,0,0,2.09706895166752,2.28750301409313,1.00523481690292,2.25971616249959,0.767146371990992,2.0778804455956,2.10913641988085,0,0.124406970610093,0,1.47309299120532,5.20481771850815,4.59804208866946,5.76198815377118,6.0281927134286,6.46346741937615,9.09607414022434,7.02762934197966,7.76110112217047,0,0.945530400839096,1.05570674498369,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,1.68231958851302,4.6307075570678,0,0,0.213288250535234,0,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.667380422864376,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0.504941854408746,0.315508219416257,0,0,0.716906393857656,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,1.8006109403131,0.129358683782755,1.71469628025274,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,0.79472541912506,0,0.590758108698309,0.403865799792591,0.228620419965,0.100826185136841,0,0,0,1.81384306892169,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,0,1.20297227640581,0,0,0,0.900642406448441,0.453142408984205,2.5888015587591,1.3492355185943,4.78829848081237,2.04880326904961,2.43106717068294,1.46729213839588,1.10306105070008,2.00022055021454,1.23621034343337,0.962757628775446,1.26348605881899,1.52087579934144,1.69763707247469,1.21733959710847,1.40855335290712,0.631790158511746,0.952587382566147,1.27472758539341,0.964546102318525,1.23625770240992,1.03039244094078,3.08582327146874,1.24233064311536,1.1921809497366,2.0348498328526,1.69396884747595,1.52306294205018,1.28049581010941,1.05227884575137,0.950628796921032,1.12228454331548,0.949080144993393,0.591026894253381,2.04615521584845,0.464810523557898,2.12197272079256,2.49810577937946,1.16965804222704,1.50409737833809,0.57386499620653,0,0.695603506861264 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|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.67983705950435,2.87505128729943,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,1.19840044207362,1.92109152660777,4.97710139080693,3.64516033495565,5.67877395648731,2.57085885963423,2.65042249141936,2.81728838194394,2.1086003624012,6.43453150627015,2.20231761998777,0.766124028511126,1.22885226604995,1.84640802822271,1.46380229763855,2.08365348222704,0.837548997004143,0.56276261003168,0.916789486660861,1.76777151284201,2.27794689278565,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0.969750506270444,0,1.17112318804619,0.83778682725382,0,0,0,0,2.09706895166752,2.28750301409313,1.00523481690292,2.25971616249959,0.767146371990992,2.0778804455956,2.10913641988085,0,0.124406970610093,0,1.47309299120532,5.20481771850815,4.59804208866946,5.76198815377118,6.0281927134286,6.46346741937615,9.09607414022434,7.02762934197966,7.76110112217047,0,0.945530400839096,1.05570674498369,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,1.68231958851302,4.6307075570678,0,0,0.213288250535234,0,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.667380422864376,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0.504941854408746,0.315508219416257,0,0,0.716906393857656,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,1.8006109403131,0.129358683782755,1.71469628025274,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,0.79472541912506,0,0.590758108698309,0.403865799792591,0.228620419965,0.100826185136841,0,0,0,1.81384306892169,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,0,1.20297227640581,0,0,0,0.900642406448441,0.453142408984205,2.5888015587591,1.3492355185943,4.78829848081237,2.04880326904961,2.43106717068294,1.46729213839588,1.10306105070008,2.00022055021454,1.23621034343337,0.962757628775446,1.26348605881899,1.52087579934144,1.69763707247469,1.21733959710847,1.40855335290712,0.631790158511746,0.952587382566147,1.27472758539341,0.964546102318525,1.23625770240992,1.03039244094078,3.08582327146874,1.24233064311536,1.1921809497366,2.0348498328526,1.69396884747595,1.52306294205018,1.28049581010941,1.05227884575137,0.950628796921032,1.12228454331548,0.949080144993393,0.591026894253381,2.04615521584845,0.464810523557898,2.12197272079256,2.49810577937946,1.16965804222704,1.50409737833809,0.57386499620653,0,0.695603506861264 | ||
|short_description=p16@Nfia | |short_description=p16@Nfia | ||
}} | }} |
Latest revision as of 07:41, 27 September 2015
Short description: | p16@Nfia |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Nfia_5end |
Coexpression cluster: | MCL_coexpression_mm9:1761 |
Association with transcript: | -137bp_to_NM_001122952, uc008tty.2_5end |
EntrezGene: | Nfia |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.48e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.48e-12 | 23 |
ectodermal cell | 8.94e-12 | 44 |
neurectodermal cell | 8.94e-12 | 44 |
neural cell | 4.91e-11 | 43 |
neuron | 5.79e-09 | 33 |
neuronal stem cell | 5.79e-09 | 33 |
neuroblast | 5.79e-09 | 33 |
electrically signaling cell | 5.79e-09 | 33 |
neuron of cerebral cortex | 5.07e-08 | 6 |