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FFCP PHASE1:Mm9::chr4:97248473..97248496,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18027
|EntrezGene=18027
|HGNC=
|HGNC=
|MCL_coexpression_id=1761
|TSSclassifier=NA
|UniProt=Q02780,Q3UTK6
|UniProt=Q02780,Q3UTK6
|association_with_transcript=-137bp_to_NM_001122952,uc008tty.2_5end
|association_with_transcript=-137bp_to_NM_001122952,uc008tty.2_5end
|cluster_id=chr4:97248473..97248496,+
|description=CAGE_peak_16_at_Nfia_5end
|description=CAGE_peak_16_at_Nfia_5end
|id=chr4:97248473..97248496,+
|id=chr4:97248473..97248496,+
|ontology_enrichment_celltype=CL:0000221!2.08e-13!44;CL:0000133!2.08e-13!44;CL:0002319!8.26e-13!43;CL:0000117!1.06e-11!23;CL:0000337!1.06e-11!23;CL:0000540!8.20e-11!33;CL:0000047!8.20e-11!33;CL:0000031!8.20e-11!33;CL:0000404!8.20e-11!33;CL:0000055!4.45e-09!50;CL:0000393!1.67e-07!39;CL:0000211!1.67e-07!39
|ontology_enrichment_celltype=CL:0000221!2.08e-13!44;CL:0000133!2.08e-13!44;CL:0002319!8.26e-13!43;CL:0000117!1.06e-11!23;CL:0000337!1.06e-11!23;CL:0000540!8.20e-11!33;CL:0000047!8.20e-11!33;CL:0000031!8.20e-11!33;CL:0000404!8.20e-11!33;CL:0000055!4.45e-09!50;CL:0000393!1.67e-07!39;CL:0000211!1.67e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-12,23;CL:0000337,2.48e-12,23;CL:0000221,8.94e-12,44;CL:0000133,8.94e-12,44;CL:0002319,4.91e-11,43;CL:0000540,5.79e-09,33;CL:0000047,5.79e-09,33;CL:0000031,5.79e-09,33;CL:0000404,5.79e-09,33;CL:0002609,5.07e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.14e-25!63;UBERON:0004121!1.05e-23!102;UBERON:0000924!1.05e-23!102;UBERON:0006601!1.05e-23!102;UBERON:0001017!3.12e-22!73;UBERON:0005743!3.12e-22!73;UBERON:0000073!1.54e-21!75;UBERON:0001016!1.54e-21!75;UBERON:0002346!9.74e-20!71;UBERON:0003075!9.74e-20!71;UBERON:0007284!9.74e-20!71;UBERON:0000153!5.75e-19!94;UBERON:0003056!5.77e-19!49;UBERON:0007811!2.13e-18!86;UBERON:0001049!1.20e-17!52;UBERON:0005068!1.20e-17!52;UBERON:0006241!1.20e-17!52;UBERON:0007135!1.20e-17!52;UBERON:0000955!7.31e-16!50;UBERON:0006238!7.31e-16!50;UBERON:0002616!4.33e-15!49;UBERON:0002020!4.97e-13!34;UBERON:0003080!2.20e-12!40;UBERON:0002780!8.00e-12!39;UBERON:0001890!8.00e-12!39;UBERON:0006240!8.00e-12!39;UBERON:0000020!3.09e-10!12;UBERON:0001032!3.09e-10!12;UBERON:0004456!3.09e-10!12;UBERON:0002791!4.62e-10!29;UBERON:0003528!4.62e-10!29;UBERON:0001893!4.62e-10!29;UBERON:0001444!7.70e-09!11;UBERON:0000970!2.20e-08!9;UBERON:0000019!2.20e-08!9;UBERON:0000047!2.20e-08!9;UBERON:0004088!2.20e-08!9;UBERON:0002104!2.20e-08!9;UBERON:0001456!2.20e-08!9;UBERON:0003072!2.20e-08!9;UBERON:0003071!2.20e-08!9;UBERON:0004128!2.20e-08!9;UBERON:0005085!1.91e-07!13;UBERON:0000956!3.71e-07!21;UBERON:0001869!3.71e-07!21;UBERON:0000203!3.71e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.43e-25,95;UBERON:0000924,8.43e-25,95;UBERON:0006601,8.43e-25,95;UBERON:0002346,1.24e-23,64;UBERON:0003075,1.24e-23,64;UBERON:0007284,1.24e-23,64;UBERON:0010371,1.04e-21,73;UBERON:0001017,1.91e-19,73;UBERON:0001016,1.50e-18,75;UBERON:0003056,2.03e-18,49;UBERON:0001049,2.23e-16,52;UBERON:0005068,2.23e-16,52;UBERON:0006241,2.23e-16,52;UBERON:0007135,2.23e-16,52;UBERON:0000073,2.65e-16,54;UBERON:0010314,3.41e-15,92;UBERON:0000020,1.98e-14,12;UBERON:0001032,1.98e-14,12;UBERON:0004456,1.98e-14,12;UBERON:0002020,1.38e-13,34;UBERON:0000033,5.25e-13,13;UBERON:0000955,1.39e-12,47;UBERON:0006238,1.39e-12,47;UBERON:0000970,1.10e-11,9;UBERON:0000019,1.10e-11,9;UBERON:0000047,1.10e-11,9;UBERON:0010312,1.10e-11,9;UBERON:0004088,1.10e-11,9;UBERON:0002104,1.10e-11,9;UBERON:0001456,1.10e-11,9;UBERON:0003072,1.10e-11,9;UBERON:0004128,1.10e-11,9;UBERON:0003071,1.10e-11,9;UBERON:0002616,1.13e-11,46;UBERON:0005085,4.99e-11,13;UBERON:0001444,5.52e-11,11;UBERON:0003080,3.51e-10,40;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0002780,1.68e-09,39;UBERON:0001890,1.68e-09,39;UBERON:0006240,1.68e-09,39;UBERON:0000956,4.00e-08,21;UBERON:0001869,4.00e-08,21;UBERON:0000203,4.00e-08,21;UBERON:0003076,1.24e-07,12;UBERON:0003057,1.24e-07,12;UBERON:0002240,4.52e-07,6;UBERON:0005174,4.52e-07,6;UBERON:0001137,4.52e-07,6
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.67983705950435,2.87505128729943,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,1.19840044207362,1.92109152660777,4.97710139080693,3.64516033495565,5.67877395648731,2.57085885963423,2.65042249141936,2.81728838194394,2.1086003624012,6.43453150627015,2.20231761998777,0.766124028511126,1.22885226604995,1.84640802822271,1.46380229763855,2.08365348222704,0.837548997004143,0.56276261003168,0.916789486660861,1.76777151284201,2.27794689278565,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0.969750506270444,0,1.17112318804619,0.83778682725382,0,0,0,0,2.09706895166752,2.28750301409313,1.00523481690292,2.25971616249959,0.767146371990992,2.0778804455956,2.10913641988085,0,0.124406970610093,0,1.47309299120532,5.20481771850815,4.59804208866946,5.76198815377118,6.0281927134286,6.46346741937615,9.09607414022434,7.02762934197966,7.76110112217047,0,0.945530400839096,1.05570674498369,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,1.68231958851302,4.6307075570678,0,0,0.213288250535234,0,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.667380422864376,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0.504941854408746,0.315508219416257,0,0,0.716906393857656,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,1.8006109403131,0.129358683782755,1.71469628025274,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,0.79472541912506,0,0.590758108698309,0.403865799792591,0.228620419965,0.100826185136841,0,0,0,1.81384306892169,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,0,1.20297227640581,0,0,0,0.900642406448441,0.453142408984205,2.5888015587591,1.3492355185943,4.78829848081237,2.04880326904961,2.43106717068294,1.46729213839588,1.10306105070008,2.00022055021454,1.23621034343337,0.962757628775446,1.26348605881899,1.52087579934144,1.69763707247469,1.21733959710847,1.40855335290712,0.631790158511746,0.952587382566147,1.27472758539341,0.964546102318525,1.23625770240992,1.03039244094078,3.08582327146874,1.24233064311536,1.1921809497366,2.0348498328526,1.69396884747595,1.52306294205018,1.28049581010941,1.05227884575137,0.950628796921032,1.12228454331548,0.949080144993393,0.591026894253381,2.04615521584845,0.464810523557898,2.12197272079256,2.49810577937946,1.16965804222704,1.50409737833809,0.57386499620653,0,0.695603506861264
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,1.5378032791413,0.972149495371417,1.67983705950435,2.87505128729943,0,0,0,0,0,0,1.21389876515759,2.11596391708813,0,0,0,0,0,0,1.19840044207362,1.92109152660777,4.97710139080693,3.64516033495565,5.67877395648731,2.57085885963423,2.65042249141936,2.81728838194394,2.1086003624012,6.43453150627015,2.20231761998777,0.766124028511126,1.22885226604995,1.84640802822271,1.46380229763855,2.08365348222704,0.837548997004143,0.56276261003168,0.916789486660861,1.76777151284201,2.27794689278565,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0.969750506270444,0,1.17112318804619,0.83778682725382,0,0,0,0,2.09706895166752,2.28750301409313,1.00523481690292,2.25971616249959,0.767146371990992,2.0778804455956,2.10913641988085,0,0.124406970610093,0,1.47309299120532,5.20481771850815,4.59804208866946,5.76198815377118,6.0281927134286,6.46346741937615,9.09607414022434,7.02762934197966,7.76110112217047,0,0.945530400839096,1.05570674498369,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,1.68231958851302,4.6307075570678,0,0,0.213288250535234,0,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.667380422864376,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51593129416388,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0.504941854408746,0.315508219416257,0,0,0.716906393857656,0.445597348164788,1.13230612315533,0.404810701674894,0.584511715822624,0,8.67567554338879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,1.8006109403131,0.129358683782755,1.71469628025274,0.177340233642274,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,0.79472541912506,0,0.590758108698309,0.403865799792591,0.228620419965,0.100826185136841,0,0,0,1.81384306892169,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,0,1.20297227640581,0,0,0,0.900642406448441,0.453142408984205,2.5888015587591,1.3492355185943,4.78829848081237,2.04880326904961,2.43106717068294,1.46729213839588,1.10306105070008,2.00022055021454,1.23621034343337,0.962757628775446,1.26348605881899,1.52087579934144,1.69763707247469,1.21733959710847,1.40855335290712,0.631790158511746,0.952587382566147,1.27472758539341,0.964546102318525,1.23625770240992,1.03039244094078,3.08582327146874,1.24233064311536,1.1921809497366,2.0348498328526,1.69396884747595,1.52306294205018,1.28049581010941,1.05227884575137,0.950628796921032,1.12228454331548,0.949080144993393,0.591026894253381,2.04615521584845,0.464810523557898,2.12197272079256,2.49810577937946,1.16965804222704,1.50409737833809,0.57386499620653,0,0.695603506861264
|short_description=p16@Nfia
|short_description=p16@Nfia
}}
}}

Latest revision as of 07:41, 27 September 2015

Short description:p16@Nfia
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_16_at_Nfia_5end
Coexpression cluster:MCL_coexpression_mm9:1761
Association with transcript: -137bp_to_NM_001122952, uc008tty.2_5end
EntrezGene:Nfia
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p16@Nfia

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C65.20
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.48e-1223
neuroblast (sensu Vertebrata)2.48e-1223
ectodermal cell8.94e-1244
neurectodermal cell8.94e-1244
neural cell4.91e-1143
neuron5.79e-0933
neuronal stem cell5.79e-0933
neuroblast5.79e-0933
electrically signaling cell5.79e-0933
neuron of cerebral cortex5.07e-086

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure8.43e-2595
ectoderm8.43e-2595
presumptive ectoderm8.43e-2595
neurectoderm1.24e-2364
neural plate1.24e-2364
presumptive neural plate1.24e-2364
ecto-epithelium1.04e-2173
central nervous system1.91e-1973
nervous system1.50e-1875
pre-chordal neural plate2.03e-1849
neural tube2.23e-1652
neural rod2.23e-1652
future spinal cord2.23e-1652
neural keel2.23e-1652
regional part of nervous system2.65e-1654
structure with developmental contribution from neural crest3.41e-1592
sense organ1.98e-1412
sensory system1.98e-1412
entire sense organ system1.98e-1412
gray matter1.38e-1334
head5.25e-1313
brain1.39e-1247
future brain1.39e-1247
eye1.10e-119
camera-type eye1.10e-119
simple eye1.10e-119
immature eye1.10e-119
ocular region1.10e-119
visual system1.10e-119
face1.10e-119
optic cup1.10e-119
optic vesicle1.10e-119
eye primordium1.10e-119
regional part of brain1.13e-1146
ectodermal placode4.99e-1113
subdivision of head5.52e-1111
anterior neural tube3.51e-1040
brain grey matter1.22e-0929
regional part of telencephalon1.22e-0929
telencephalon1.22e-0929
regional part of forebrain1.68e-0939
forebrain1.68e-0939
future forebrain1.68e-0939
cerebral cortex4.00e-0821
cerebral hemisphere4.00e-0821
pallium4.00e-0821
posterior neural tube1.24e-0712
chordal neural plate1.24e-0712
spinal cord4.52e-076
dorsal region element4.52e-076
dorsum4.52e-076
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