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FFCP PHASE1:Mm9::chr3:108714370..108714410,-: Difference between revisions

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{{FFCP|EntrezGene=66921|HGNC=|UniProt=|association_with_transcript=203bp_to_ENSMUST00000129273_5end|description=CAGE_peak_3_at_Prpf38b_5end|id=chr3:108714370..108714410,-|ontology_enrichment_celltype=CL:0000988!6.41e-09!32;CL:0002032!6.41e-09!32;CL:0000037!6.41e-09!32;CL:0000566!6.41e-09!32;CL:0000837!6.41e-09!32;CL:0000838!1.77e-07!12;CL:0002031!5.37e-07!25;CL:0000084!7.68e-07!11;CL:0000827!7.68e-07!11;CL:0000542!7.82e-07!13;CL:0000051!7.82e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,3.56e-14,32;CL:0002032,3.56e-14,32;CL:0000037,3.56e-14,32;CL:0000837,3.56e-14,32;CL:0000838,2.27e-11,12;CL:0002031,2.29e-11,25;CL:0000084,2.54e-10,11;CL:0000827,2.54e-10,11;CL:0000542,3.39e-10,13;CL:0000051,3.39e-10,13;CL:0002320,3.44e-09,46;CL:0000134,3.44e-09,46;CL:0000791,4.09e-09,9;CL:0000789,4.09e-09,9;CL:0002420,4.09e-09,9;CL:0002419,4.09e-09,9;CL:0000790,4.09e-09,9;CL:0000624,3.15e-08,8;CL:0000738,6.13e-08,17;CL:0002087,6.13e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.86e-08!48;UBERON:0002405!3.30e-08!70;UBERON:0002390!4.15e-08!45;UBERON:0003061!4.15e-08!45;UBERON:0004119!6.06e-08!130;UBERON:0000925!6.06e-08!130;UBERON:0006595!6.06e-08!130;UBERON:0004921!6.71e-08!126;UBERON:0004185!6.71e-08!126;UBERON:0004177!7.21e-08!29;UBERON:0001007!8.95e-08!128;UBERON:0001555!8.95e-08!128;UBERON:0007026!8.95e-08!128;UBERON:0000077!1.14e-07!97;UBERON:0005057!3.67e-07!51;UBERON:0001041!5.34e-07!92;UBERON:0000926!6.88e-07!193;UBERON:0004120!6.88e-07!193;UBERON:0006603!6.88e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.40e-14,45;UBERON:0003061,6.40e-14,45;UBERON:0002193,9.12e-14,48;UBERON:0002405,9.12e-14,48;UBERON:0004177,1.50e-12,29;UBERON:0005057,1.50e-12,29;UBERON:0000077,1.88e-11,35;UBERON:0006562,5.23e-11,24;UBERON:0001557,5.23e-11,24;UBERON:0001042,5.23e-11,24;UBERON:0008814,5.23e-11,24;UBERON:0009145,5.23e-11,24;UBERON:0002370,1.40e-10,23;UBERON:0000974,1.40e-10,23;UBERON:0004807,1.40e-10,23;UBERON:0005058,1.40e-10,23;UBERON:0003351,1.40e-10,23;UBERON:0009113,1.40e-10,23;UBERON:0003295,1.40e-10,23;UBERON:0009722,1.40e-10,23;UBERON:0005562,1.40e-10,23;UBERON:0007690,1.40e-10,23;UBERON:0003408,6.70e-10,24;UBERON:0002384,3.44e-09,46;UBERON:0000072,4.03e-09,27;UBERON:0003929,1.57e-07,55;UBERON:0003081,4.70e-07,87;UBERON:0000065,9.33e-07,41|phase1_expression=0.640595388419176,1.74487703819681,0.909998478779072,0.30246421130683,2.00358291978539,0.839396359559449,0.467225281191051,1.29123323441576,4.08287294239834,4.44722600011788,3.08192342805909,4.54701306273417,1.02720437958723,1.39872643870396,1.33243904726265,1.01237633694913,1.39912375625629,1.41957974411207,1.7824876368746,0.84877930359606,0.340173160604279,1.48936426801328,1.30599894569468,0.319984845586813,0.68822784320151,0.57423196411502,0,1.72376986148711,0.190023419456374,1.26015064879965,0.443461021310609,1.90509202037889,1.23012957516914,0,0.866554859253824,0.664938581433969,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,2.04913645487534,0,1.00717454380462,0.912392380975631,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0.279972843250725,0,3.18786951509699,3.62681071005672,2.01656279485478,0,0.85960031981627,0,0.202316460859598,0,0.633831403506179,0,0,0,0,1.4209602298922,0,0.768436610643109,0.518448061542388,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.302904773332736,0.226714680320357,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,0.68510327831436,3.88406825470758,0.742210695324124,0.693941307064543,0.608930956624282,0,0.301445281105245,1.05829836422134,0.376999773989026,0.988779870937496,0.722996784599558,0.884610551949874,0.485300549842228,1.32504911076236,0.969750506270444,0,0.292780797011547,4.1889341362691,1.27728527604296,2.03685711660064,1.79970819298022,2.03312363316904,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.973447578406546,0.407357455401265,1.11966273549084,1.26361379216837,0.631325567659422,0.780722657776222,0.459804208866946,0,0,0.544291993210623,0.12811372028485,0.468508622798644,0.258703370739016,0.862271971731369,0.945530400839096,1.05570674498369,0.43839146485515,1.11218899690239,0,1.4404749548556,0.59710280045548,2.1066395619397,0.51469581422943,2.27330799516474,1.44988040774851,0,0,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.493679549740441,0.492502392237286,0.486412857275134,0.146199987425332,0.658650345873152,0,0,0,0.660837565967596,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,0.605050573870028,0,0.570676878337677,0.949058123089023,0.988193728344065,0.754005626400808,1.59165177632921,1.16978452271472,0.898819408654221,0.432276099749388,0.1991412732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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66921
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=203bp_to_ENSMUST00000129273_5end
|cluster_id=chr3:108714370..108714410,-
|description=CAGE_peak_3_at_Prpf38b_5end
|id=chr3:108714370..108714410,-
|ontology_enrichment_celltype=CL:0000988!6.41e-09!32;CL:0002032!6.41e-09!32;CL:0000037!6.41e-09!32;CL:0000566!6.41e-09!32;CL:0000837!6.41e-09!32;CL:0000838!1.77e-07!12;CL:0002031!5.37e-07!25;CL:0000084!7.68e-07!11;CL:0000827!7.68e-07!11;CL:0000542!7.82e-07!13;CL:0000051!7.82e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000988,3.56e-14,32;CL:0002032,3.56e-14,32;CL:0000037,3.56e-14,32;CL:0000837,3.56e-14,32;CL:0000838,2.27e-11,12;CL:0002031,2.29e-11,25;CL:0000084,2.54e-10,11;CL:0000827,2.54e-10,11;CL:0000542,3.39e-10,13;CL:0000051,3.39e-10,13;CL:0002320,3.44e-09,46;CL:0000134,3.44e-09,46;CL:0000791,4.09e-09,9;CL:0000789,4.09e-09,9;CL:0002420,4.09e-09,9;CL:0002419,4.09e-09,9;CL:0000790,4.09e-09,9;CL:0000624,3.15e-08,8;CL:0000738,6.13e-08,17;CL:0002087,6.13e-08,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.86e-08!48;UBERON:0002405!3.30e-08!70;UBERON:0002390!4.15e-08!45;UBERON:0003061!4.15e-08!45;UBERON:0004119!6.06e-08!130;UBERON:0000925!6.06e-08!130;UBERON:0006595!6.06e-08!130;UBERON:0004921!6.71e-08!126;UBERON:0004185!6.71e-08!126;UBERON:0004177!7.21e-08!29;UBERON:0001007!8.95e-08!128;UBERON:0001555!8.95e-08!128;UBERON:0007026!8.95e-08!128;UBERON:0000077!1.14e-07!97;UBERON:0005057!3.67e-07!51;UBERON:0001041!5.34e-07!92;UBERON:0000926!6.88e-07!193;UBERON:0004120!6.88e-07!193;UBERON:0006603!6.88e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.40e-14,45;UBERON:0003061,6.40e-14,45;UBERON:0002193,9.12e-14,48;UBERON:0002405,9.12e-14,48;UBERON:0004177,1.50e-12,29;UBERON:0005057,1.50e-12,29;UBERON:0000077,1.88e-11,35;UBERON:0006562,5.23e-11,24;UBERON:0001557,5.23e-11,24;UBERON:0001042,5.23e-11,24;UBERON:0008814,5.23e-11,24;UBERON:0009145,5.23e-11,24;UBERON:0002370,1.40e-10,23;UBERON:0000974,1.40e-10,23;UBERON:0004807,1.40e-10,23;UBERON:0005058,1.40e-10,23;UBERON:0003351,1.40e-10,23;UBERON:0009113,1.40e-10,23;UBERON:0003295,1.40e-10,23;UBERON:0009722,1.40e-10,23;UBERON:0005562,1.40e-10,23;UBERON:0007690,1.40e-10,23;UBERON:0003408,6.70e-10,24;UBERON:0002384,3.44e-09,46;UBERON:0000072,4.03e-09,27;UBERON:0003929,1.57e-07,55;UBERON:0003081,4.70e-07,87;UBERON:0000065,9.33e-07,41
|phase1_expression=0.640595388419176,1.74487703819681,0.909998478779072,0.30246421130683,2.00358291978539,0.839396359559449,0.467225281191051,1.29123323441576,4.08287294239834,4.44722600011788,3.08192342805909,4.54701306273417,1.02720437958723,1.39872643870396,1.33243904726265,1.01237633694913,1.39912375625629,1.41957974411207,1.7824876368746,0.84877930359606,0.340173160604279,1.48936426801328,1.30599894569468,0.319984845586813,0.68822784320151,0.57423196411502,0,1.72376986148711,0.190023419456374,1.26015064879965,0.443461021310609,1.90509202037889,1.23012957516914,0,0.866554859253824,0.664938581433969,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,2.04913645487534,0,1.00717454380462,0.912392380975631,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0.279972843250725,0,3.18786951509699,3.62681071005672,2.01656279485478,0,0.85960031981627,0,0.202316460859598,0,0.633831403506179,0,0,0,0,1.4209602298922,0,0.768436610643109,0.518448061542388,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.46081959976873,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.302904773332736,0.226714680320357,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,0.68510327831436,3.88406825470758,0.742210695324124,0.693941307064543,0.608930956624282,0,0.301445281105245,1.05829836422134,0.376999773989026,0.988779870937496,0.722996784599558,0.884610551949874,0.485300549842228,1.32504911076236,0.969750506270444,0,0.292780797011547,4.1889341362691,1.27728527604296,2.03685711660064,1.79970819298022,2.03312363316904,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.973447578406546,0.407357455401265,1.11966273549084,1.26361379216837,0.631325567659422,0.780722657776222,0.459804208866946,0,0,0.544291993210623,0.12811372028485,0.468508622798644,0.258703370739016,0.862271971731369,0.945530400839096,1.05570674498369,0.43839146485515,1.11218899690239,0,1.4404749548556,0.59710280045548,2.1066395619397,0.51469581422943,2.27330799516474,1.44988040774851,0,0,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.493679549740441,0.492502392237286,0.486412857275134,0.146199987425332,0.658650345873152,0,0,0,0.660837565967596,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,0.605050573870028,0,0.570676878337677,0.949058123089023,0.988193728344065,0.754005626400808,1.59165177632921,1.16978452271472,0.898819408654221,0.432276099749388,0.199141273254367,0.948339504765408,0.342745537829186,0,0.407302655690628,0.193952487167626,0.771494018793504,0.632365371242573,0.442830443938806,0,0.370191491765402,0.296452627087149,0.333690211432188,1.17935397067922,0.899448449539415,1.42002084971952,0.241177159752417,1.01850340712568,0.575392274901621,3.89124544260085,1.09824565275233,1.43768206527355,1.48856379067401,0.312037673114561,0.757736633841335,0.179397413521912,1.4473305640901,1.29327233116623,1.51593129416388,0.488894929326078,0.678980343100753,0.704070744865506,0.837531287209079,0.476087281772027,0.780534591431195,1.10344600874334,0.664394068946325,0.318909537314974,1.14704320301017,0.690739927463582,0.433947175744535,0,1.08781136763742,0.983528546038072,1.65562047782839,0.481651769963376,0,0,0.757412781613119,0.631016438832513,0,1.29254038639679,0.477937595905104,1.11399337041197,0.849229592366497,0.809621403349789,0,1.58115111178609,0.321321316421807,0.709700426041343,0,1.14020871547503,0.989820737835213,1.32745138339963,0.485561272309963,0.906970670894253,0.754420319023592,0,0,0.516856586336442,1.81766864738753,1.78248689192361,0.948110273807448,1.05418608574999,1.03135543248187,0,0.36012218806262,0.517434735131018,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0.938686832254841,0.63549621259146,0.661585194164886,0.49465875882444,2.09903754704677,0.965006798850494,0.238744688006273,0.656563598980245,2.33184669303881,0.18542530201051,3.75915937755276,0.412773735926445,0.740778109478847,1.50694765603753,3.41735569302563,1.83022538565218,1.18984900995699,2.23922323717853,2.07299960706636,0,0.949007980743406,0.609958401380546,0.432021363287205,0.418176592028937,0.87345025498471,0.674321731924103,0.661227645802687,0.26175594198403,0.388844919875379,0.621339313086926,1.12738587736838,1.19613236835183,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.58678619322877,0.2604087696879,1.25831213310853,0.483168241652012,1.15212002503146,2.8441000856536,0.405450430580328,1.33524244314275,1.81889152168913,2.50637373934474,0.993406773906324,1.08175904567972,2.51072196196781,1.11063094942962,1.37172251979,1.00826185136841,2.24153125701431,1.53938946624527,2.57129184799452,1.13365191807606,0.221985953374065,0.179427713218951,0.503653849092235,0.965947970160952,0.750729901804728,0.915758121336325,1.71494703263253,0,1.12950368523413,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.170733605754134,1.70174701947806,0.838452650511929,0.735374033800057,0.44449345560323,0.824140228955577,0,0.505394423527595,1.52087579934144,1.32038438970253,0.561849044819294,0.89635213366817,0.34461281373368,0.952587382566147,0.463537303779422,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0.526139422875686,0.271608227691724,0,0.118635018124174,0.788035859004508,0.409231043169689,0.77468420592983,0.192906610981141,0.499621155875892,0,0.644613162144895,1.14772999241306,0.882365676478062,0.927471342481686
|short_description=p3@Prpf38b
}}

Latest revision as of 07:50, 27 September 2015

Short description:p3@Prpf38b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Prpf38b_5end
Coexpression cluster:NA
Association with transcript: 203bp_to_ENSMUST00000129273_5end
EntrezGene:Prpf38b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Prpf38b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system6.40e-1445
blood island6.40e-1445
hemolymphoid system9.12e-1448
immune system9.12e-1448
hemopoietic organ1.50e-1229
immune organ1.50e-1229
mixed endoderm/mesoderm-derived structure1.88e-1135
pharynx5.23e-1124
upper respiratory tract5.23e-1124
chordate pharynx5.23e-1124
pharyngeal arch system5.23e-1124
pharyngeal region of foregut5.23e-1124
thymus1.40e-1023
neck1.40e-1023
respiratory system epithelium1.40e-1023
hemolymphoid system gland1.40e-1023
pharyngeal epithelium1.40e-1023
thymic region1.40e-1023
pharyngeal gland1.40e-1023
entire pharyngeal arch endoderm1.40e-1023
thymus primordium1.40e-1023
early pharyngeal endoderm1.40e-1023
gland of gut6.70e-1024
connective tissue3.44e-0946
segment of respiratory tract4.03e-0927
gut epithelium1.57e-0755
lateral plate mesoderm4.70e-0787
respiratory tract9.33e-0741
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