FFCP PHASE1:Mm9::chr15:9365863..9365880,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75568 | |EntrezGene=75568 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6P8Y1 | |UniProt=Q6P8Y1 | ||
|association_with_transcript=80bp_to_ENSMUST00000042360,NM_029341,uc007vfn.1_5end | |association_with_transcript=80bp_to_ENSMUST00000042360,NM_029341,uc007vfn.1_5end | ||
|cluster_id=chr15:9365863..9365880,+ | |||
|description=CAGE_peak_3_at_Capsl_5end | |description=CAGE_peak_3_at_Capsl_5end | ||
|id=chr15:9365863..9365880,+ | |id=chr15:9365863..9365880,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.69e-08,3;CL:0002202,4.69e-08,3;CL:0000069,4.69e-08,3;CL:0002632,4.69e-08,3;CL:0002368,4.69e-08,3;CL:0000307,4.69e-08,3;CL:0000377,4.69e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.76e-10!17;UBERON:0005181!2.76e-10!17;UBERON:0002224!2.76e-10!17;UBERON:0000915!2.76e-10!17;UBERON:0008947!2.76e-10!17;UBERON:0003258!2.76e-10!17;UBERON:0002048!2.98e-08!14;UBERON:0000117!2.98e-08!14;UBERON:0000171!2.98e-08!14;UBERON:0000170!2.98e-08!14;UBERON:0005597!2.98e-08!14;UBERON:0000118!2.98e-08!14;UBERON:0001041!3.19e-08!92;UBERON:0000077!3.38e-08!97;UBERON:0004921!4.57e-08!126;UBERON:0004185!4.57e-08!126;UBERON:0001007!5.12e-08!128;UBERON:0001555!5.12e-08!128;UBERON:0007026!5.12e-08!128;UBERON:0004119!1.64e-07!130;UBERON:0000925!1.64e-07!130;UBERON:0006595!1.64e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.14e-15,17;UBERON:0005181,2.14e-15,17;UBERON:0002224,2.14e-15,17;UBERON:0000915,2.14e-15,17;UBERON:0008947,2.14e-15,17;UBERON:0003258,2.14e-15,17;UBERON:0002048,5.23e-10,14;UBERON:0000117,5.23e-10,14;UBERON:0000171,5.23e-10,14;UBERON:0000170,5.23e-10,14;UBERON:0005597,5.23e-10,14;UBERON:0000118,5.23e-10,14;UBERON:0005177,1.10e-09,79;UBERON:0002100,5.60e-09,90;UBERON:0003126,4.69e-08,3;UBERON:0001005,4.69e-08,3;UBERON:0007196,4.69e-08,3;UBERON:0001558,4.69e-08,3;UBERON:0005153,5.30e-08,17;UBERON:0000474,1.88e-07,9;UBERON:0009569,6.71e-07,66 | |||
|phase1_expression=2.7225304007815,0,0.454999239389536,0,0,0.671517087647559,0.700837921786577,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0.595303031057488,0,0,0.47997726838022,0,0,0,0.646413698057667,0.190023419456374,0,1.33038306393183,0,0,0,0.288851619751275,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.589257170947335,0,0,0,0,3.18850937571846,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,1.12674735821344,0,0,0,2.59789249213457,1.52015919285059,1.51657333504435,0.5709193985953,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.486723789203273,0,0.124406970610093,1.0108910337347,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.350296027101508,0,0.164167464079095,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0,0,0.795825888164603,0.779856348476481,0,0.648414149624083,0.199141273254367,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.69560190836683,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0,0,0,0,3.72140947668503,1.5601883655728,1.76805214562978,0.358794827043824,0,2.21703828199926,0.568474235311454,0.325929952884052,0.509235257325564,0.704070744865506,0.670025029767263,2.38043640886014,1.36593553500459,1.10344600874334,1.10732344824387,0.637819074629948,1.63863314715738,2.07221978239075,2.4590339958857,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,4.68402281187286,0.35613120733451,1.95464351224291,8.90838664051691,1.32745138339963,1.45668381692989,0.302323556964751,0.754420319023592,0,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,2.04263763452273,0,0,0.428674070063185,1.95074257006501,1.96205699362278,0.822745103010605,0.913394847343798,0,0,0,0.32977250588296,0.322928853391811,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0,1.5298058699447,0.279902904647316,0.690999869022119,0,0.158167996790568,0.609958401380546,0.86404272657441,1.04544148007234,1.09181281873089,0.539457385539283,0.661227645802687,0.523511883968059,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.506868376472335,0,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0.649604114888975,0,0.39736270956253,0.480781798079875,0.443068581523732,0.605798699688886,0.381034033274999,0.100826185136841,0.0974578807397524,0.577271049841977,0.233753804363138,0.906921534460845,0.443971906748129,0,0,1.35232715822533,0.375364950902364,3.6630324853453,4.07299920250225,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.628839487883947,0.735374033800057,0.666740183404846,0,0.320919209591815,0.758091635291392,0.50695859978048,0,0.37456602987953,0.640251524048693,0.689225627467359,0.476293691283074,0.231768651889711,0,0.824171801606613,1.17759136107518,0.342869252385415,0.70990322463735,0.715308569841963,0.290692833264657,0.658765662907314,0.507687647350059,0.365855945745545,1.05227884575137,0.543216455383447,0,0.830445126869219,0.492522411877817,0.818462086339379,0.77468420592983,0.578719832943424,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=2.7225304007815,0,0.454999239389536,0,0,0.671517087647559,0.700837921786577,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,0.595303031057488,0,0,0.47997726838022,0,0,0,0.646413698057667,0.190023419456374,0,1.33038306393183,0,0,0,0.288851619751275,0.498703936075477,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.589257170947335,0,0,0,0,3.18850937571846,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,1.12674735821344,0,0,0,2.59789249213457,1.52015919285059,1.51657333504435,0.5709193985953,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.11981512450592,0,0.127070227073065,0.299581278809645,0,0,0,0.255715457330331,0.20778804455956,0.486723789203273,0,0.124406970610093,1.0108910337347,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.350296027101508,0,0.164167464079095,0,0,0,0,0.210289948564127,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0,0,0.795825888164603,0.779856348476481,0,0.648414149624083,0.199141273254367,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.69560190836683,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0,0,0,0,3.72140947668503,1.5601883655728,1.76805214562978,0.358794827043824,0,2.21703828199926,0.568474235311454,0.325929952884052,0.509235257325564,0.704070744865506,0.670025029767263,2.38043640886014,1.36593553500459,1.10344600874334,1.10732344824387,0.637819074629948,1.63863314715738,2.07221978239075,2.4590339958857,0,0,0,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,4.68402281187286,0.35613120733451,1.95464351224291,8.90838664051691,1.32745138339963,1.45668381692989,0.302323556964751,0.754420319023592,0,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,2.04263763452273,0,0,0.428674070063185,1.95074257006501,1.96205699362278,0.822745103010605,0.913394847343798,0,0,0,0.32977250588296,0.322928853391811,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0,1.5298058699447,0.279902904647316,0.690999869022119,0,0.158167996790568,0.609958401380546,0.86404272657441,1.04544148007234,1.09181281873089,0.539457385539283,0.661227645802687,0.523511883968059,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.506868376472335,0,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0.649604114888975,0,0.39736270956253,0.480781798079875,0.443068581523732,0.605798699688886,0.381034033274999,0.100826185136841,0.0974578807397524,0.577271049841977,0.233753804363138,0.906921534460845,0.443971906748129,0,0,1.35232715822533,0.375364950902364,3.6630324853453,4.07299920250225,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.628839487883947,0.735374033800057,0.666740183404846,0,0.320919209591815,0.758091635291392,0.50695859978048,0,0.37456602987953,0.640251524048693,0.689225627467359,0.476293691283074,0.231768651889711,0,0.824171801606613,1.17759136107518,0.342869252385415,0.70990322463735,0.715308569841963,0.290692833264657,0.658765662907314,0.507687647350059,0.365855945745545,1.05227884575137,0.543216455383447,0,0.830445126869219,0.492522411877817,0.818462086339379,0.77468420592983,0.578719832943424,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p3@Capsl | |short_description=p3@Capsl | ||
}} | }} |
Latest revision as of 10:51, 1 October 2015
Short description: | p3@Capsl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Capsl_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENSMUST00000042360, NM_029341, uc007vfn.1_5end |
EntrezGene: | Capsl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.69e-08 | 3 |
epithelial cell of tracheobronchial tree | 4.69e-08 | 3 |
branched duct epithelial cell | 4.69e-08 | 3 |
epithelial cell of lower respiratory tract | 4.69e-08 | 3 |
respiratory epithelial cell | 4.69e-08 | 3 |
tracheal epithelial cell | 4.69e-08 | 3 |
tracheoblast | 4.69e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.14e-15 | 17 |
thoracic segment organ | 2.14e-15 | 17 |
thoracic cavity | 2.14e-15 | 17 |
thoracic segment of trunk | 2.14e-15 | 17 |
respiratory primordium | 2.14e-15 | 17 |
endoderm of foregut | 2.14e-15 | 17 |
lung | 5.23e-10 | 14 |
respiratory tube | 5.23e-10 | 14 |
respiration organ | 5.23e-10 | 14 |
pair of lungs | 5.23e-10 | 14 |
lung primordium | 5.23e-10 | 14 |
lung bud | 5.23e-10 | 14 |
trunk region element | 1.10e-09 | 79 |
trunk | 5.60e-09 | 90 |
trachea | 4.69e-08 | 3 |
respiratory airway | 4.69e-08 | 3 |
tracheobronchial tree | 4.69e-08 | 3 |
lower respiratory tract | 4.69e-08 | 3 |
epithelial bud | 5.30e-08 | 17 |
female reproductive system | 1.88e-07 | 9 |
subdivision of trunk | 6.71e-07 | 66 |