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FFCP PHASE1:Mm9::chr13:29045174..29045188,-: Difference between revisions

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{{FFCP|EntrezGene=20677|HGNC=|MCL_coexpression_id=100|UniProt=E9QM41,E9Q0Q6|association_with_transcript=-284bp_to_ENSMUST00000110326,ENSMUST00000168068_5end|description=CAGE_peak_7_at_Sox4_5end|id=chr13:29045174..29045188,-|ontology_enrichment_celltype=CL:0000055!8.51e-14!50;CL:0000393!3.24e-11!39;CL:0000211!3.24e-11!39;CL:0000221!3.45e-11!44;CL:0000133!3.45e-11!44;CL:0002319!5.52e-11!43;CL:0000540!5.81e-09!33;CL:0000047!5.81e-09!33;CL:0000031!5.81e-09!33;CL:0000404!5.81e-09!33;CL:0002321!7.10e-09!70;CL:0000220!7.10e-09!70;CL:0000117!6.27e-07!23;CL:0000337!6.27e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.38e-24,23;CL:0000337,3.38e-24,23;CL:0000393,1.00e-21,39;CL:0000211,1.00e-21,39;CL:0000540,5.71e-21,33;CL:0000047,5.71e-21,33;CL:0000031,5.71e-21,33;CL:0000404,5.71e-21,33;CL:0002319,9.01e-20,43;CL:0000221,3.13e-19,44;CL:0000133,3.13e-19,44;CL:0002609,4.16e-19,6;CL:0002321,2.38e-18,70;CL:0000034,1.88e-10,97;CL:0002608,2.69e-10,3;CL:0002613,3.82e-10,3;CL:0000120,6.61e-10,3;CL:0000723,4.01e-09,91;CL:0000048,4.01e-09,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-11,73;UBERON:0002020,6.20e-11,34;UBERON:0001016,6.82e-11,75;UBERON:0003528,4.35e-09,29;UBERON:0002791,4.35e-09,29;UBERON:0001893,4.35e-09,29;UBERON:0004121,9.85e-08,95;UBERON:0000924,9.85e-08,95;UBERON:0006601,9.85e-08,95;UBERON:0001954,3.11e-07,7;UBERON:0003022,3.11e-07,7;UBERON:0002421,3.11e-07,7;UBERON:0000349,3.11e-07,7;UBERON:0002600,3.11e-07,7|phase1_expression=0.320297694209588,0,0,0,0,1.17515490338323,0.233612640595526,0.387369970324729,0.140788722151667,0.468129052643987,0.171217968225505,0.239316476986009,0,0.437102012094987,0,0,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0.794327609607082,1.04479915655574,0,0,0,0,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,1.01376931219515,1.10128051297009,0,0.65407546914134,0.219686182734472,0.194429899074283,0.279972843250725,2.87505128729943,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0.515672092277442,1.61853168687678,3.1739458756322,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,1.53687322128622,3.7328260431052,7.69533848490637,2.94454945891935,0.285650984403804,1.54607978666129,2.81728838194394,3.25874601462004,4.5960939330501,0,0,0.153606533256243,1.31886287730194,3.7509933876988,4.68822033501084,0,0,0.15279824777681,0.883885756421003,0.569486723196412,2.60959224155421,0.908714319998209,0.68014404096107,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,1.29894624606728,0.760079596425296,1.51657333504435,0.11418387971906,0,0,0,0,0.230615497256059,0,0.823120949949934,0.251333182659351,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0.762421362438388,0,0,0.879580464790051,0.347648640384553,0.255715457330331,0,0,0.407357455401265,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.884474488967262,0.512454881139399,0.187403449119458,0,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.700592054203017,0,0,0.243206428637567,0,0,0.402619256281115,0,1.13195073617213,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,1.13800740571849,0.114248512609729,1.1270773567308,0,0.193952487167626,0.771494018793504,0.442655759869801,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,0.504941854408746,0.631016438832513,0.390438744296638,1.29254038639679,0.716906393857656,0.891194696329576,0.283076530788832,0.404810701674894,1.46127928955656,0,0,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,1.13163047853539,0,0,0.516856586336442,0,0.712994756769443,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.807322133479528,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0.619160603889667,0.370389054739423,0,0,0,1.18984900995699,0.279902904647316,1.10559979043539,0,0.790839983952838,0,0,0,0,0.134864346384821,0.578574190077352,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.2604087696879,0.419437377702843,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.389762468933385,0.358053391334963,0.39736270956253,0.600977247599844,0.443068581523732,0.403865799792591,0.0762068066549998,0.302478555410522,0.487289403698762,0.481059208201647,0.467507608726276,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.853668028770671,0.729320151204882,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.0574354689556133,0,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.771626443924566,0.999242311751784,0,0.429742108096597,0.956441660344217,0.441182838239031,0|short_description=p7@Sox4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20677
|HGNC=
|MCL_coexpression_id=100
|TSSclassifier=NA
|UniProt=E9QM41,E9Q0Q6
|association_with_transcript=-284bp_to_ENSMUST00000110326,ENSMUST00000168068_5end
|cluster_id=chr13:29045174..29045188,-
|description=CAGE_peak_7_at_Sox4_5end
|id=chr13:29045174..29045188,-
|ontology_enrichment_celltype=CL:0000055!8.51e-14!50;CL:0000393!3.24e-11!39;CL:0000211!3.24e-11!39;CL:0000221!3.45e-11!44;CL:0000133!3.45e-11!44;CL:0002319!5.52e-11!43;CL:0000540!5.81e-09!33;CL:0000047!5.81e-09!33;CL:0000031!5.81e-09!33;CL:0000404!5.81e-09!33;CL:0002321!7.10e-09!70;CL:0000220!7.10e-09!70;CL:0000117!6.27e-07!23;CL:0000337!6.27e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.38e-24,23;CL:0000337,3.38e-24,23;CL:0000393,1.00e-21,39;CL:0000211,1.00e-21,39;CL:0000540,5.71e-21,33;CL:0000047,5.71e-21,33;CL:0000031,5.71e-21,33;CL:0000404,5.71e-21,33;CL:0002319,9.01e-20,43;CL:0000221,3.13e-19,44;CL:0000133,3.13e-19,44;CL:0002609,4.16e-19,6;CL:0002321,2.38e-18,70;CL:0000034,1.88e-10,97;CL:0002608,2.69e-10,3;CL:0002613,3.82e-10,3;CL:0000120,6.61e-10,3;CL:0000723,4.01e-09,91;CL:0000048,4.01e-09,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-11,73;UBERON:0002020,6.20e-11,34;UBERON:0001016,6.82e-11,75;UBERON:0003528,4.35e-09,29;UBERON:0002791,4.35e-09,29;UBERON:0001893,4.35e-09,29;UBERON:0004121,9.85e-08,95;UBERON:0000924,9.85e-08,95;UBERON:0006601,9.85e-08,95;UBERON:0001954,3.11e-07,7;UBERON:0003022,3.11e-07,7;UBERON:0002421,3.11e-07,7;UBERON:0000349,3.11e-07,7;UBERON:0002600,3.11e-07,7
|phase1_expression=0.320297694209588,0,0,0,0,1.17515490338323,0.233612640595526,0.387369970324729,0.140788722151667,0.468129052643987,0.171217968225505,0.239316476986009,0,0.437102012094987,0,0,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0.794327609607082,1.04479915655574,0,0,0,0,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,1.01376931219515,1.10128051297009,0,0.65407546914134,0.219686182734472,0.194429899074283,0.279972843250725,2.87505128729943,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0.515672092277442,1.61853168687678,3.1739458756322,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,1.53687322128622,3.7328260431052,7.69533848490637,2.94454945891935,0.285650984403804,1.54607978666129,2.81728838194394,3.25874601462004,4.5960939330501,0,0,0.153606533256243,1.31886287730194,3.7509933876988,4.68822033501084,0,0,0.15279824777681,0.883885756421003,0.569486723196412,2.60959224155421,0.908714319998209,0.68014404096107,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,1.29894624606728,0.760079596425296,1.51657333504435,0.11418387971906,0,0,0,0,0.230615497256059,0,0.823120949949934,0.251333182659351,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0.762421362438388,0,0,0.879580464790051,0.347648640384553,0.255715457330331,0,0,0.407357455401265,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.884474488967262,0.512454881139399,0.187403449119458,0,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0.51469581422943,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.700592054203017,0,0,0.243206428637567,0,0,0.402619256281115,0,1.13195073617213,0,0,0.213288250535234,0.696710015581316,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,1.13800740571849,0.114248512609729,1.1270773567308,0,0.193952487167626,0.771494018793504,0.442655759869801,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0.327869890753351,0.504941854408746,0.631016438832513,0.390438744296638,1.29254038639679,0.716906393857656,0.891194696329576,0.283076530788832,0.404810701674894,1.46127928955656,0,0,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,1.13163047853539,0,0,0.516856586336442,0,0.712994756769443,0.632073515871632,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.807322133479528,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0.619160603889667,0.370389054739423,0,0,0,1.18984900995699,0.279902904647316,1.10559979043539,0,0.790839983952838,0,0,0,0,0.134864346384821,0.578574190077352,0,0.129614973291793,0,0,0.149516546043979,0,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.2604087696879,0.419437377702843,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.389762468933385,0.358053391334963,0.39736270956253,0.600977247599844,0.443068581523732,0.403865799792591,0.0762068066549998,0.302478555410522,0.487289403698762,0.481059208201647,0.467507608726276,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.853668028770671,0.729320151204882,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.0574354689556133,0,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.953744759789284,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.771626443924566,0.999242311751784,0,0.429742108096597,0.956441660344217,0.441182838239031,0
|short_description=p7@Sox4
}}

Latest revision as of 11:43, 1 October 2015

Short description:p7@Sox4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Sox4_5end
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: -284bp_to_ENSMUST00000110326, ENSMUST00000168068_5end
EntrezGene:Sox4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p7@Sox4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.64e-1173
gray matter6.20e-1134
nervous system6.82e-1175
brain grey matter4.35e-0929
regional part of telencephalon4.35e-0929
telencephalon4.35e-0929
ectoderm-derived structure9.85e-0895
ectoderm9.85e-0895
presumptive ectoderm9.85e-0895
Ammon's horn3.11e-077
lobe parts of cerebral cortex3.11e-077
hippocampal formation3.11e-077
limbic system3.11e-077
limbic lobe3.11e-077
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