FFCP PHASE1:Mm9::chr8:113245351..113245356,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244654 | |EntrezGene=244654 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1233 | |MCL_coexpression_id=1233 | ||
|TSSclassifier=NA | |||
|UniProt=Q6P9S0 | |UniProt=Q6P9S0 | ||
|association_with_transcript=-19bp_to_ENSMUST00000052457_5end | |association_with_transcript=-19bp_to_ENSMUST00000052457_5end | ||
|cluster_id=chr8:113245351..113245356,+ | |||
|description=CAGE_peak_5_at_Mtss1l_5end | |description=CAGE_peak_5_at_Mtss1l_5end | ||
|id=chr8:113245351..113245356,+ | |id=chr8:113245351..113245356,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.92e-14!44;CL:0000133!3.92e-14!44;CL:0002319!3.95e-14!43;CL:0000540!1.12e-11!33;CL:0000047!1.12e-11!33;CL:0000031!1.12e-11!33;CL:0000404!1.12e-11!33;CL:0000055!1.53e-10!50;CL:0000117!3.78e-09!23;CL:0000337!3.78e-09!23;CL:0000393!2.34e-08!39;CL:0000211!2.34e-08!39 | |ontology_enrichment_celltype=CL:0000221!3.92e-14!44;CL:0000133!3.92e-14!44;CL:0002319!3.95e-14!43;CL:0000540!1.12e-11!33;CL:0000047!1.12e-11!33;CL:0000031!1.12e-11!33;CL:0000404!1.12e-11!33;CL:0000055!1.53e-10!50;CL:0000117!3.78e-09!23;CL:0000337!3.78e-09!23;CL:0000393!2.34e-08!39;CL:0000211!2.34e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.24e-15,44;CL:0000133,2.24e-15,44;CL:0002319,2.27e-15,43;CL:0000540,9.60e-13,33;CL:0000047,9.60e-13,33;CL:0000031,9.60e-13,33;CL:0000404,9.60e-13,33;CL:0000117,5.98e-10,23;CL:0000337,5.98e-10,23;CL:0000393,6.10e-09,39;CL:0000211,6.10e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.48e-21!73;UBERON:0005743!1.48e-21!73;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0004121!8.73e-19!102;UBERON:0000924!8.73e-19!102;UBERON:0006601!8.73e-19!102;UBERON:0002346!3.03e-14!71;UBERON:0003075!3.03e-14!71;UBERON:0007284!3.03e-14!71;UBERON:0001049!2.63e-13!52;UBERON:0005068!2.63e-13!52;UBERON:0006241!2.63e-13!52;UBERON:0007135!2.63e-13!52;UBERON:0000955!4.25e-12!50;UBERON:0006238!4.25e-12!50;UBERON:0000033!6.55e-12!63;UBERON:0002616!1.42e-11!49;UBERON:0002020!1.15e-10!34;UBERON:0002791!2.17e-08!29;UBERON:0003528!2.17e-08!29;UBERON:0001893!2.17e-08!29;UBERON:0003056!3.15e-08!49;UBERON:0003080!7.25e-08!40;UBERON:0002780!2.09e-07!39;UBERON:0001890!2.09e-07!39;UBERON:0006240!2.09e-07!39;UBERON:0004111!2.67e-07!122;UBERON:0000025!3.29e-07!114;UBERON:0003076!3.38e-07!12;UBERON:0003057!3.38e-07!12;UBERON:0000153!8.70e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!1.48e-21!73;UBERON:0005743!1.48e-21!73;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0004121!8.73e-19!102;UBERON:0000924!8.73e-19!102;UBERON:0006601!8.73e-19!102;UBERON:0002346!3.03e-14!71;UBERON:0003075!3.03e-14!71;UBERON:0007284!3.03e-14!71;UBERON:0001049!2.63e-13!52;UBERON:0005068!2.63e-13!52;UBERON:0006241!2.63e-13!52;UBERON:0007135!2.63e-13!52;UBERON:0000955!4.25e-12!50;UBERON:0006238!4.25e-12!50;UBERON:0000033!6.55e-12!63;UBERON:0002616!1.42e-11!49;UBERON:0002020!1.15e-10!34;UBERON:0002791!2.17e-08!29;UBERON:0003528!2.17e-08!29;UBERON:0001893!2.17e-08!29;UBERON:0003056!3.15e-08!49;UBERON:0003080!7.25e-08!40;UBERON:0002780!2.09e-07!39;UBERON:0001890!2.09e-07!39;UBERON:0006240!2.09e-07!39;UBERON:0004111!2.67e-07!122;UBERON:0000025!3.29e-07!114;UBERON:0003076!3.38e-07!12;UBERON:0003057!3.38e-07!12;UBERON:0000153!8.70e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-21,73;UBERON:0001016,3.05e-20,75;UBERON:0004121,3.06e-17,95;UBERON:0000924,3.06e-17,95;UBERON:0006601,3.06e-17,95;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0000073,5.13e-13,54;UBERON:0001049,2.25e-12,52;UBERON:0005068,2.25e-12,52;UBERON:0006241,2.25e-12,52;UBERON:0007135,2.25e-12,52;UBERON:0010371,6.94e-12,73;UBERON:0002020,8.82e-11,34;UBERON:0000955,6.23e-10,47;UBERON:0006238,6.23e-10,47;UBERON:0010314,6.75e-10,92;UBERON:0002616,2.09e-09,46;UBERON:0003528,2.53e-08,29;UBERON:0002791,2.53e-08,29;UBERON:0001893,2.53e-08,29;UBERON:0003076,8.56e-08,12;UBERON:0003057,8.56e-08,12;UBERON:0005157,1.07e-07,20;UBERON:0003080,8.90e-07,40;UBERON:0003056,9.00e-07,49 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.304130793658544,0,1.56478268869608,5.01457859675027,7.46933021297204,4.08302788055995,1.25987779462826,5.75010257459886,0,0,0,0.771778308107841,0.85960031981627,0,5.86717736492834,2.64495489636016,3.80298842103708,1.35537812827653,1.77858959222228,0.449949858640699,0,1.4209602298922,4.79360176829448,8.06858441175265,2.38486108309499,2.02508907497536,2.94454945891935,3.71346279724945,3.53389665522582,1.71487118900936,1.15014565221884,4.5960939330501,2.20231761998777,2.93680877595932,3.5329502648936,1.97829431595291,1.73826522844578,2.6045668527838,2.23346399201105,2.25105044012672,4.73674568108111,3.83017161115768,2.98980529678116,3.54158947068071,0.37863096666592,1.058001841495,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,1.68533304158102,3.2381761289831,3.37721805983729,1.7666978725517,1.54927761754349,10.2661181931454,15.2883143823987,14.2213340630666,0,0,0,0.5709193985953,0.517875767294343,1.7813056687779,1.90833859442749,0,1.84492397804847,1.20578112442098,1.41106448562846,0.628332956648377,0,1.3013942122792,0.884610551949874,3.558870698843,2.20841518460394,1.93950101254089,0,5.5628351432194,10.4723353406728,0.255457055208591,0,0,0.127070227073065,4.49371918214468,4.11750542536764,6.65968066198181,4.86708096538374,4.09144731728529,1.87009240103604,2.92034273521964,1.2220723662038,1.24406970610093,0.505445516867349,0.841767423545896,1.04096354370163,1.37941262660084,1.98068342785884,0.90422890701429,2.10913147369116,1.7935920839879,2.15513966487376,1.55222022443409,1.5089759505299,2.08016688184601,2.11141348996739,1.7535658594206,1.11218899690239,2.089512999133,1.02891068203972,1.79130840136644,0,0,0,0.828503090142008,0.938104239924385,0.900310307305074,2.60419209143731,0.393528463494808,0.617068451549513,1.39520366850245,1.60964040839772,1.86824547787471,2.63295759861569,0.820837320395476,2.10778904819225,1.16959989940266,1.3173006917463,0.536825675041487,3.57492912559016,8.12946437796347,0,0,1.91959425481711,1.85789337488351,1.41754207454303,0.201683524623343,2.00140239460383,0.380451252225118,0.474529061544512,1.31759163779209,0.502670417600539,0,1.75467678407208,0.898819408654221,0.648414149624083,0.796565093017469,0.379335801906163,1.5994791765362,0,0.814605311381257,1.35766741017338,1.54298803758701,1.01178459398812,0.442830443938806,0.470996183524124,0.863780147452604,0.889357881261447,0,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,1.84753190166605,1.13694847062291,2.93336957595647,2.37643120085263,2.34690248288502,1.50755631697634,3.57065461329021,3.90267295715598,5.35959489961049,4.87222317227305,5.58091690301205,3.4411296090305,2.07221978239075,2.31438493730419,0,0,1.47529281905711,3.03530420935206,3.53211297973142,4.80567915028033,0.491804836130026,3.7870639080656,2.52406575533005,3.51394869866975,3.87762115919038,2.38968797952552,2.00518806674155,3.96307143104365,1.61924280669958,3.21481443702443,1.58115111178609,4.4984984299053,1.70328102249922,1.24645922567079,1.62886959353576,2.96946221350564,1.32745138339963,0.728341908464944,1.51161778482376,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,0.316036757935816,2.10837217149998,0,0.680879211507576,1.8006109403131,1.29358683782755,0.643011105094777,0.886701168211368,0.891844088010353,0.658196082408484,1.522324745573,0.469343416127421,0.21183207086382,1.10264199027481,1.48397627647332,0.645857706783622,0.844380948994182,0.835606408021955,0.656563598980245,0.874442509889552,5.37733375830478,0.341741761595705,3.92135049130123,1.66675074632741,0,0.136694227721025,0.457556346413045,0,0,0.276399947608848,0.954670618015114,0.790839983952838,0.813277868507395,1.18805874903981,0.836353184057875,1.74690050996942,0.944050424693745,1.73572257023205,1.04702376793612,0.777689839750757,0.621339313086926,0,1.49516546043979,1.15820943319968,1.36115831840833,1.29159823477731,1.520605129417,0.469428954583016,1.3020438484395,1.15345278868282,0,0.288030006257865,0.316011120628178,0.810900861160657,0.616265742988964,0.77952493786677,1.43221356533985,0.79472541912506,0.600977247599844,0.295379054349154,0.302899349844443,0.304827226619999,0.201652370273681,0.194915761479505,0.0962118416403295,0.467507608726276,1.36038230169127,0,0.0897138566094757,0.167884616364078,3.28422309854724,2.25218970541418,2.19781949120718,1.50057865355346,0.501572104035363,5.0827665835536,3.22227665555024,1.71868654031819,2.40594455281163,0.685082519770642,1.5107877947794,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0.830298780673413,0.798049746802062,1.70733605754134,1.21553358534147,2.30574478890781,2.02227859295016,1.11123363900808,1.64828045791115,2.24643446714271,2.02157769411038,1.77435509923168,1.13175804831646,1.31098110457835,1.40855335290712,1.78049953762401,0.952587382566147,1.85414921511769,1.73618298417335,1.23625770240992,1.32479028120958,0.685738504770831,1.4198064492747,0.953744759789284,1.45346416632329,1.78807822789128,1.4384483341585,1.28049581010941,1.31534855718921,2.44447404922551,0,2.37270036248348,1.77308068276014,1.63692417267876,2.16911577660352,1.73615949883027,2.24829520144151,1.87145286756327,1.71896843238639,1.3390183244819,1.76473135295612,1.85494268496337 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,0.304130793658544,0,1.56478268869608,5.01457859675027,7.46933021297204,4.08302788055995,1.25987779462826,5.75010257459886,0,0,0,0.771778308107841,0.85960031981627,0,5.86717736492834,2.64495489636016,3.80298842103708,1.35537812827653,1.77858959222228,0.449949858640699,0,1.4209602298922,4.79360176829448,8.06858441175265,2.38486108309499,2.02508907497536,2.94454945891935,3.71346279724945,3.53389665522582,1.71487118900936,1.15014565221884,4.5960939330501,2.20231761998777,2.93680877595932,3.5329502648936,1.97829431595291,1.73826522844578,2.6045668527838,2.23346399201105,2.25105044012672,4.73674568108111,3.83017161115768,2.98980529678116,3.54158947068071,0.37863096666592,1.058001841495,2.31891590961342,0.860423876981386,0,0,0,0.448026887097336,1.68533304158102,3.2381761289831,3.37721805983729,1.7666978725517,1.54927761754349,10.2661181931454,15.2883143823987,14.2213340630666,0,0,0,0.5709193985953,0.517875767294343,1.7813056687779,1.90833859442749,0,1.84492397804847,1.20578112442098,1.41106448562846,0.628332956648377,0,1.3013942122792,0.884610551949874,3.558870698843,2.20841518460394,1.93950101254089,0,5.5628351432194,10.4723353406728,0.255457055208591,0,0,0.127070227073065,4.49371918214468,4.11750542536764,6.65968066198181,4.86708096538374,4.09144731728529,1.87009240103604,2.92034273521964,1.2220723662038,1.24406970610093,0.505445516867349,0.841767423545896,1.04096354370163,1.37941262660084,1.98068342785884,0.90422890701429,2.10913147369116,1.7935920839879,2.15513966487376,1.55222022443409,1.5089759505299,2.08016688184601,2.11141348996739,1.7535658594206,1.11218899690239,2.089512999133,1.02891068203972,1.79130840136644,0,0,0,0.828503090142008,0.938104239924385,0.900310307305074,2.60419209143731,0.393528463494808,0.617068451549513,1.39520366850245,1.60964040839772,1.86824547787471,2.63295759861569,0.820837320395476,2.10778904819225,1.16959989940266,1.3173006917463,0.536825675041487,3.57492912559016,8.12946437796347,0,0,1.91959425481711,1.85789337488351,1.41754207454303,0.201683524623343,2.00140239460383,0.380451252225118,0.474529061544512,1.31759163779209,0.502670417600539,0,1.75467678407208,0.898819408654221,0.648414149624083,0.796565093017469,0.379335801906163,1.5994791765362,0,0.814605311381257,1.35766741017338,1.54298803758701,1.01178459398812,0.442830443938806,0.470996183524124,0.863780147452604,0.889357881261447,0,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,1.84753190166605,1.13694847062291,2.93336957595647,2.37643120085263,2.34690248288502,1.50755631697634,3.57065461329021,3.90267295715598,5.35959489961049,4.87222317227305,5.58091690301205,3.4411296090305,2.07221978239075,2.31438493730419,0,0,1.47529281905711,3.03530420935206,3.53211297973142,4.80567915028033,0.491804836130026,3.7870639080656,2.52406575533005,3.51394869866975,3.87762115919038,2.38968797952552,2.00518806674155,3.96307143104365,1.61924280669958,3.21481443702443,1.58115111178609,4.4984984299053,1.70328102249922,1.24645922567079,1.62886959353576,2.96946221350564,1.32745138339963,0.728341908464944,1.51161778482376,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,0.316036757935816,2.10837217149998,0,0.680879211507576,1.8006109403131,1.29358683782755,0.643011105094777,0.886701168211368,0.891844088010353,0.658196082408484,1.522324745573,0.469343416127421,0.21183207086382,1.10264199027481,1.48397627647332,0.645857706783622,0.844380948994182,0.835606408021955,0.656563598980245,0.874442509889552,5.37733375830478,0.341741761595705,3.92135049130123,1.66675074632741,0,0.136694227721025,0.457556346413045,0,0,0.276399947608848,0.954670618015114,0.790839983952838,0.813277868507395,1.18805874903981,0.836353184057875,1.74690050996942,0.944050424693745,1.73572257023205,1.04702376793612,0.777689839750757,0.621339313086926,0,1.49516546043979,1.15820943319968,1.36115831840833,1.29159823477731,1.520605129417,0.469428954583016,1.3020438484395,1.15345278868282,0,0.288030006257865,0.316011120628178,0.810900861160657,0.616265742988964,0.77952493786677,1.43221356533985,0.79472541912506,0.600977247599844,0.295379054349154,0.302899349844443,0.304827226619999,0.201652370273681,0.194915761479505,0.0962118416403295,0.467507608726276,1.36038230169127,0,0.0897138566094757,0.167884616364078,3.28422309854724,2.25218970541418,2.19781949120718,1.50057865355346,0.501572104035363,5.0827665835536,3.22227665555024,1.71868654031819,2.40594455281163,0.685082519770642,1.5107877947794,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0.830298780673413,0.798049746802062,1.70733605754134,1.21553358534147,2.30574478890781,2.02227859295016,1.11123363900808,1.64828045791115,2.24643446714271,2.02157769411038,1.77435509923168,1.13175804831646,1.31098110457835,1.40855335290712,1.78049953762401,0.952587382566147,1.85414921511769,1.73618298417335,1.23625770240992,1.32479028120958,0.685738504770831,1.4198064492747,0.953744759789284,1.45346416632329,1.78807822789128,1.4384483341585,1.28049581010941,1.31534855718921,2.44447404922551,0,2.37270036248348,1.77308068276014,1.63692417267876,2.16911577660352,1.73615949883027,2.24829520144151,1.87145286756327,1.71896843238639,1.3390183244819,1.76473135295612,1.85494268496337 | ||
|short_description=p5@Mtss1l | |short_description=p5@Mtss1l | ||
}} | }} |
Latest revision as of 12:21, 1 October 2015
Short description: | p5@Mtss1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mtss1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1233 |
Association with transcript: | -19bp_to_ENSMUST00000052457_5end |
EntrezGene: | Mtss1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.24e-15 | 44 |
neurectodermal cell | 2.24e-15 | 44 |
neural cell | 2.27e-15 | 43 |
neuron | 9.60e-13 | 33 |
neuronal stem cell | 9.60e-13 | 33 |
neuroblast | 9.60e-13 | 33 |
electrically signaling cell | 9.60e-13 | 33 |
CNS neuron (sensu Vertebrata) | 5.98e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.98e-10 | 23 |
electrically responsive cell | 6.10e-09 | 39 |
electrically active cell | 6.10e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.61e-21 | 73 |
nervous system | 3.05e-20 | 75 |
ectoderm-derived structure | 3.06e-17 | 95 |
ectoderm | 3.06e-17 | 95 |
presumptive ectoderm | 3.06e-17 | 95 |
neurectoderm | 1.56e-13 | 64 |
neural plate | 1.56e-13 | 64 |
presumptive neural plate | 1.56e-13 | 64 |
regional part of nervous system | 5.13e-13 | 54 |
neural tube | 2.25e-12 | 52 |
neural rod | 2.25e-12 | 52 |
future spinal cord | 2.25e-12 | 52 |
neural keel | 2.25e-12 | 52 |
ecto-epithelium | 6.94e-12 | 73 |
gray matter | 8.82e-11 | 34 |
brain | 6.23e-10 | 47 |
future brain | 6.23e-10 | 47 |
structure with developmental contribution from neural crest | 6.75e-10 | 92 |
regional part of brain | 2.09e-09 | 46 |
brain grey matter | 2.53e-08 | 29 |
regional part of telencephalon | 2.53e-08 | 29 |
telencephalon | 2.53e-08 | 29 |
posterior neural tube | 8.56e-08 | 12 |
chordal neural plate | 8.56e-08 | 12 |
epithelial fold | 1.07e-07 | 20 |
anterior neural tube | 8.90e-07 | 40 |
pre-chordal neural plate | 9.00e-07 | 49 |