FFCP PHASE1:Mm9::chrX:104344803..104344839,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:104344803..104344839,+
|short_description=p3@A630033H20Rik
|description=CAGE_peak_3_at_A630033H20Rik_5end
|association_with_transcript=10bp_to_ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=213438 | |EntrezGene=213438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=450 | |||
|TSSclassifier=NA | |||
|UniProt=A2ASC4,Q8BY68 | |UniProt=A2ASC4,Q8BY68 | ||
|association_with_transcript=10bp_to_ENSMUST00000125676,NM_001122595,uc012hnq.1_5end | |||
|cluster_id=chrX:104344803..104344839,+ | |||
|description=CAGE_peak_3_at_A630033H20Rik_5end | |||
|id=chrX:104344803..104344839,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.31e-11!12;CL:0000084!1.36e-10!11;CL:0000827!1.36e-10!11;CL:0000988!1.73e-10!32;CL:0002032!1.73e-10!32;CL:0000037!1.73e-10!32;CL:0000566!1.73e-10!32;CL:0000837!1.73e-10!32;CL:0000542!2.38e-10!13;CL:0000051!2.38e-10!13;CL:0000791!9.30e-10!9;CL:0000789!9.30e-10!9;CL:0002420!9.30e-10!9;CL:0002419!9.30e-10!9;CL:0000790!9.30e-10!9;CL:0000624!9.21e-09!8;CL:0002031!1.32e-08!25;CL:0000738!2.49e-08!17;CL:0002087!2.49e-08!17;CL:0000893!4.09e-07!6;CL:0002489!4.09e-07!6;CL:0000898!4.09e-07!6;CL:0000809!4.09e-07!6;CL:0000810!4.09e-07!6;CL:0000895!4.09e-07!6;CL:0000808!4.09e-07!6;CL:0000894!4.09e-07!6;CL:0000806!4.09e-07!6;CL:0000807!4.09e-07!6;CL:0000805!4.09e-07!6;CL:0002425!4.09e-07!6;CL:0002436!4.09e-07!6;CL:0002427!4.09e-07!6;CL:0002428!4.09e-07!6;CL:0002429!4.09e-07!6;CL:0002433!4.09e-07!6;CL:0002431!4.09e-07!6;CL:0002432!4.09e-07!6;CL:0002320!7.29e-07!46;CL:0000134!7.29e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.36e-33,9;CL:0000789,6.36e-33,9;CL:0002420,6.36e-33,9;CL:0002419,6.36e-33,9;CL:0000790,6.36e-33,9;CL:0000838,3.16e-31,12;CL:0002031,2.09e-30,25;CL:0000542,9.73e-29,13;CL:0000051,9.73e-29,13;CL:0000624,2.80e-28,8;CL:0000893,6.44e-28,6;CL:0002489,6.44e-28,6;CL:0000898,6.44e-28,6;CL:0000809,6.44e-28,6;CL:0000810,6.44e-28,6;CL:0000895,6.44e-28,6;CL:0000808,6.44e-28,6;CL:0000894,6.44e-28,6;CL:0000806,6.44e-28,6;CL:0000807,6.44e-28,6;CL:0000805,6.44e-28,6;CL:0002425,6.44e-28,6;CL:0002436,6.44e-28,6;CL:0002427,6.44e-28,6;CL:0002428,6.44e-28,6;CL:0002429,6.44e-28,6;CL:0002433,6.44e-28,6;CL:0002431,6.44e-28,6;CL:0002432,6.44e-28,6;CL:0000084,8.85e-27,11;CL:0000827,8.85e-27,11;CL:0000738,1.57e-26,17;CL:0002087,1.57e-26,17;CL:0000988,2.48e-23,32;CL:0002032,2.48e-23,32;CL:0000037,2.48e-23,32;CL:0000837,2.48e-23,32;CL:0002320,1.27e-15,46;CL:0000134,1.27e-15,46;CL:0000219,5.26e-13,54;CL:0000553,6.10e-08,6;CL:0000556,6.10e-08,6;CL:0000723,7.33e-07,91;CL:0000048,7.33e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.13e-17!88;UBERON:0002193!3.85e-13!48;UBERON:0002390!1.68e-12!45;UBERON:0003061!1.68e-12!45;UBERON:0004177!1.09e-11!29;UBERON:0002370!1.19e-10!23;UBERON:0000974!1.19e-10!23;UBERON:0004807!1.19e-10!23;UBERON:0005058!1.19e-10!23;UBERON:0003351!1.19e-10!23;UBERON:0009113!1.19e-10!23;UBERON:0003295!1.19e-10!23;UBERON:0009722!1.19e-10!23;UBERON:0005562!1.19e-10!23;UBERON:0007690!1.19e-10!23;UBERON:0006562!6.42e-10!24;UBERON:0003408!6.42e-10!24;UBERON:0001557!6.42e-10!24;UBERON:0001042!6.42e-10!24;UBERON:0008814!6.42e-10!24;UBERON:0009145!6.42e-10!24;UBERON:0000072!4.42e-08!27;UBERON:0002405!8.33e-08!70;UBERON:0002384!7.29e-07!46;UBERON:0000026!9.29e-07!13;UBERON:0004708!9.29e-07!13;UBERON:0002101!9.29e-07!13;UBERON:0004357!9.29e-07!13;UBERON:0009872!9.29e-07!13;UBERON:0004347!9.29e-07!13;UBERON:0005732!9.29e-07!13;UBERON:0005733!9.29e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.27e-15,46;UBERON:0002193,2.74e-12,48;UBERON:0002405,2.74e-12,48;UBERON:0002390,4.96e-11,45;UBERON:0003061,4.96e-11,45;UBERON:0002370,2.72e-09,23;UBERON:0000974,2.72e-09,23;UBERON:0004807,2.72e-09,23;UBERON:0005058,2.72e-09,23;UBERON:0003351,2.72e-09,23;UBERON:0009113,2.72e-09,23;UBERON:0003295,2.72e-09,23;UBERON:0009722,2.72e-09,23;UBERON:0005562,2.72e-09,23;UBERON:0007690,2.72e-09,23;UBERON:0006562,7.12e-09,24;UBERON:0003408,7.12e-09,24;UBERON:0001557,7.12e-09,24;UBERON:0001042,7.12e-09,24;UBERON:0008814,7.12e-09,24;UBERON:0009145,7.12e-09,24;UBERON:0000072,8.35e-08,27;UBERON:0004177,3.25e-07,29;UBERON:0005057,3.25e-07,29;UBERON:0003081,4.91e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,6.61706994112834,3.5109678948299,2.05461561870606,1.59544317990673,1.54080656938085,1.13646523144697,0.333109761815663,0,0,4.41647031501533,3.29074640653773,3.81950686618227,0,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89247812106003,2.17608642603403,5.04140698713696,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0.461230994512117,0,0,0,0,0.144599356919912,0.884610551949874,1.13236794963186,0.883366073841574,0.969750506270444,0,0,0,0,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.746441823660558,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,1.23469281844766,0,0.702213187313235,0,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0,0,1.08781136763742,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0.180938774784468,0,0.328281799490123,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0.686334519619568,0.509935289981566,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,1.26404448251271,0,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.721172697119813,0.147689527174577,0.201932899896295,0.990688486514998,0.504130925684203,0.487289403698762,0.962118416403295,0.467507608726276,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0,0,0.565879024158229,0.187283014939765,0,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.956441660344217,1.32354851471709,1.62307484934295 | |phase1_expression=0,0,0,0,0,0,0,0.645616617207881,6.61706994112834,3.5109678948299,2.05461561870606,1.59544317990673,1.54080656938085,1.13646523144697,0.333109761815663,0,0,4.41647031501533,3.29074640653773,3.81950686618227,0,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89247812106003,2.17608642603403,5.04140698713696,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0.461230994512117,0,0,0,0,0.144599356919912,0.884610551949874,1.13236794963186,0.883366073841574,0.969750506270444,0,0,0,0,0.599075622529601,0.599902730993408,0.381210681219194,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.746441823660558,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,1.23469281844766,0,0.702213187313235,0,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0,0,1.08781136763742,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0.180938774784468,0,0.328281799490123,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0.686334519619568,0.509935289981566,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,1.26404448251271,0,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.721172697119813,0.147689527174577,0.201932899896295,0.990688486514998,0.504130925684203,0.487289403698762,0.962118416403295,0.467507608726276,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0,0,0.565879024158229,0.187283014939765,0,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.956441660344217,1.32354851471709,1.62307484934295 | ||
|short_description=p3@A630033H20Rik | |||
}} | }} |
Latest revision as of 12:46, 1 October 2015
Short description: | p3@A630033H20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_A630033H20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:450 |
Association with transcript: | 10bp_to_ENSMUST00000125676, NM_001122595, uc012hnq.1_5end |
EntrezGene: | A630033H20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.27e-15 | 46 |
hemolymphoid system | 2.74e-12 | 48 |
immune system | 2.74e-12 | 48 |
hematopoietic system | 4.96e-11 | 45 |
blood island | 4.96e-11 | 45 |
thymus | 2.72e-09 | 23 |
neck | 2.72e-09 | 23 |
respiratory system epithelium | 2.72e-09 | 23 |
hemolymphoid system gland | 2.72e-09 | 23 |
pharyngeal epithelium | 2.72e-09 | 23 |
thymic region | 2.72e-09 | 23 |
pharyngeal gland | 2.72e-09 | 23 |
entire pharyngeal arch endoderm | 2.72e-09 | 23 |
thymus primordium | 2.72e-09 | 23 |
early pharyngeal endoderm | 2.72e-09 | 23 |
pharynx | 7.12e-09 | 24 |
gland of gut | 7.12e-09 | 24 |
upper respiratory tract | 7.12e-09 | 24 |
chordate pharynx | 7.12e-09 | 24 |
pharyngeal arch system | 7.12e-09 | 24 |
pharyngeal region of foregut | 7.12e-09 | 24 |
segment of respiratory tract | 8.35e-08 | 27 |
hemopoietic organ | 3.25e-07 | 29 |
immune organ | 3.25e-07 | 29 |
lateral plate mesoderm | 4.91e-07 | 87 |