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FFCP PHASE1:Mm9::chr13:36826162..36826177,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68404
|EntrezGene=68404
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8CFV4
|UniProt=Q8CFV4
|association_with_transcript=145bp_to_NM_153529,uc007qcm.1_5end
|association_with_transcript=145bp_to_NM_153529,uc007qcm.1_5end
|cluster_id=chr13:36826162..36826177,-
|description=CAGE_peak_5_at_Nrn1_5end
|description=CAGE_peak_5_at_Nrn1_5end
|id=chr13:36826162..36826177,-
|id=chr13:36826162..36826177,-
|ontology_enrichment_celltype=CL:0000117!3.13e-08!23;CL:0000337!3.13e-08!23
|ontology_enrichment_celltype=CL:0000117!3.13e-08!23;CL:0000337!3.13e-08!23
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.49e-14!52;UBERON:0005068!3.49e-14!52;UBERON:0006241!3.49e-14!52;UBERON:0007135!3.49e-14!52;UBERON:0002020!4.29e-14!34;UBERON:0000073!8.91e-13!75;UBERON:0001016!8.91e-13!75;UBERON:0000955!9.21e-13!50;UBERON:0006238!9.21e-13!50;UBERON:0002616!3.00e-12!49;UBERON:0001017!3.29e-12!73;UBERON:0005743!3.29e-12!73;UBERON:0002791!5.85e-12!29;UBERON:0003528!5.85e-12!29;UBERON:0001893!5.85e-12!29;UBERON:0000033!8.97e-12!63;UBERON:0003056!7.41e-11!49;UBERON:0003080!1.04e-10!40;UBERON:0002346!1.11e-10!71;UBERON:0003075!1.11e-10!71;UBERON:0007284!1.11e-10!71;UBERON:0002021!2.83e-10!10;UBERON:0000411!2.83e-10!10;UBERON:0001950!2.83e-10!10;UBERON:0004121!3.49e-10!102;UBERON:0000924!3.49e-10!102;UBERON:0006601!3.49e-10!102;UBERON:0002780!3.93e-10!39;UBERON:0001890!3.93e-10!39;UBERON:0006240!3.93e-10!39;UBERON:0002107!2.21e-09!22;UBERON:0007499!2.21e-09!22;UBERON:0006925!2.21e-09!22;UBERON:0009497!2.21e-09!22;UBERON:0000015!2.21e-09!22;UBERON:0002423!2.21e-09!22;UBERON:0006235!2.21e-09!22;UBERON:0008835!2.21e-09!22;UBERON:0003894!2.21e-09!22;UBERON:0004161!2.21e-09!22;UBERON:0008836!2.21e-09!22;UBERON:0000956!2.97e-09!21;UBERON:0001869!2.97e-09!21;UBERON:0000203!2.97e-09!21;UBERON:0009854!1.15e-08!23;UBERON:0009856!1.15e-08!23;UBERON:0000025!1.91e-08!114;UBERON:0002365!2.89e-08!25;UBERON:0002330!2.89e-08!25;UBERON:0002619!1.39e-07!17;UBERON:0007811!1.82e-07!86;UBERON:0004111!4.69e-07!122;UBERON:0000153!7.03e-07!94
|ontology_enrichment_uberon=UBERON:0001049!3.49e-14!52;UBERON:0005068!3.49e-14!52;UBERON:0006241!3.49e-14!52;UBERON:0007135!3.49e-14!52;UBERON:0002020!4.29e-14!34;UBERON:0000073!8.91e-13!75;UBERON:0001016!8.91e-13!75;UBERON:0000955!9.21e-13!50;UBERON:0006238!9.21e-13!50;UBERON:0002616!3.00e-12!49;UBERON:0001017!3.29e-12!73;UBERON:0005743!3.29e-12!73;UBERON:0002791!5.85e-12!29;UBERON:0003528!5.85e-12!29;UBERON:0001893!5.85e-12!29;UBERON:0000033!8.97e-12!63;UBERON:0003056!7.41e-11!49;UBERON:0003080!1.04e-10!40;UBERON:0002346!1.11e-10!71;UBERON:0003075!1.11e-10!71;UBERON:0007284!1.11e-10!71;UBERON:0002021!2.83e-10!10;UBERON:0000411!2.83e-10!10;UBERON:0001950!2.83e-10!10;UBERON:0004121!3.49e-10!102;UBERON:0000924!3.49e-10!102;UBERON:0006601!3.49e-10!102;UBERON:0002780!3.93e-10!39;UBERON:0001890!3.93e-10!39;UBERON:0006240!3.93e-10!39;UBERON:0002107!2.21e-09!22;UBERON:0007499!2.21e-09!22;UBERON:0006925!2.21e-09!22;UBERON:0009497!2.21e-09!22;UBERON:0000015!2.21e-09!22;UBERON:0002423!2.21e-09!22;UBERON:0006235!2.21e-09!22;UBERON:0008835!2.21e-09!22;UBERON:0003894!2.21e-09!22;UBERON:0004161!2.21e-09!22;UBERON:0008836!2.21e-09!22;UBERON:0000956!2.97e-09!21;UBERON:0001869!2.97e-09!21;UBERON:0000203!2.97e-09!21;UBERON:0009854!1.15e-08!23;UBERON:0009856!1.15e-08!23;UBERON:0000025!1.91e-08!114;UBERON:0002365!2.89e-08!25;UBERON:0002330!2.89e-08!25;UBERON:0002619!1.39e-07!17;UBERON:0007811!1.82e-07!86;UBERON:0004111!4.69e-07!122;UBERON:0000153!7.03e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.11e-21,10;UBERON:0000411,6.11e-21,10;UBERON:0001950,6.11e-21,10;UBERON:0000025,3.34e-17,114;UBERON:0000073,1.73e-16,54;UBERON:0002107,2.38e-16,22;UBERON:0007499,2.38e-16,22;UBERON:0006925,2.38e-16,22;UBERON:0009497,2.38e-16,22;UBERON:0000015,2.38e-16,22;UBERON:0002423,2.38e-16,22;UBERON:0006235,2.38e-16,22;UBERON:0008835,2.38e-16,22;UBERON:0003894,2.38e-16,22;UBERON:0004161,2.38e-16,22;UBERON:0008836,2.38e-16,22;UBERON:0003528,2.45e-16,29;UBERON:0002791,2.45e-16,29;UBERON:0001893,2.45e-16,29;UBERON:0001049,1.25e-15,52;UBERON:0005068,1.25e-15,52;UBERON:0006241,1.25e-15,52;UBERON:0007135,1.25e-15,52;UBERON:0009854,1.79e-15,23;UBERON:0009856,1.79e-15,23;UBERON:0004111,1.87e-15,122;UBERON:0002616,2.04e-15,46;UBERON:0003080,3.43e-15,40;UBERON:0000955,5.76e-15,47;UBERON:0006238,5.76e-15,47;UBERON:0002020,7.50e-15,34;UBERON:0002780,4.48e-14,39;UBERON:0001890,4.48e-14,39;UBERON:0006240,4.48e-14,39;UBERON:0002365,6.23e-14,25;UBERON:0002330,6.23e-14,25;UBERON:0002619,1.06e-13,17;UBERON:0000956,1.01e-12,21;UBERON:0001869,1.01e-12,21;UBERON:0000203,1.01e-12,21;UBERON:0001017,1.44e-12,73;UBERON:0001016,4.74e-12,75;UBERON:0002346,1.54e-11,64;UBERON:0003075,1.54e-11,64;UBERON:0007284,1.54e-11,64;UBERON:0003056,1.94e-11,49;UBERON:0011216,1.83e-10,194;UBERON:0000483,1.87e-09,174;UBERON:0010371,2.23e-09,73;UBERON:0000119,3.09e-09,176;UBERON:0004121,4.05e-08,95;UBERON:0000924,4.05e-08,95;UBERON:0006601,4.05e-08,95;UBERON:0002950,6.41e-07,4;UBERON:0001891,6.41e-07,4;UBERON:0009616,6.41e-07,4;UBERON:0010286,6.41e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,1.83025338797167,0.234064526321993,1.36974374580404,0.957265907944037,0,0,0,0,0,0.157731082679119,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,0.135005938331691,0.420649922702764,0.571301968807607,0.883474163806454,0.122490799214954,0.0958454710182364,0,0,4.59674417106676,2.4577045320999,0.659431438650969,0.182975287204819,1.04182674111352,2.51264699101243,1.12552522006336,1.37518422999129,1.17851434189467,0.711858403995515,0.186399445825301,0.227178579999552,0.377857800533928,0,2.58127163094416,17.6792546764015,5.39703191637817,5.84798775702902,2.24013443548668,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0.517875767294343,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.24685959107234,1.83000241127451,0,31.6360262749943,46.2844977767898,2.70124457927428,3.24482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4071069652835,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.823494773620054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55743152504579,0,0,0,0.608580364165509,1.4470629585145,2.03700681425136,0.575392274901621,0.162135226775035,3.84385978463314,7.18841032636773,4.46569137202204,4.99260276983297,8.5876818502018,4.12614051100398,7.71909634181387,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433947175744535,0,0,0,0.275936746304732,2.24770825982909,1.75817529888305,0.327869890753351,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0.963963949265421,0.709700426041343,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0.41326727862668,0,0,0,0,0,0.496375471371293,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,18.8733346967943,20.0513429703789,25.6061241692095,59.6021792200459,36.2589070747056,39.1513050134447,53.5882231836822,52.1113770331835,50.2227502399265,0,0,0,0,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.631790158511746,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,1.83025338797167,0.234064526321993,1.36974374580404,0.957265907944037,0,0,0,0,0,0.157731082679119,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,0.135005938331691,0.420649922702764,0.571301968807607,0.883474163806454,0.122490799214954,0.0958454710182364,0,0,4.59674417106676,2.4577045320999,0.659431438650969,0.182975287204819,1.04182674111352,2.51264699101243,1.12552522006336,1.37518422999129,1.17851434189467,0.711858403995515,0.186399445825301,0.227178579999552,0.377857800533928,0,2.58127163094416,17.6792546764015,5.39703191637817,5.84798775702902,2.24013443548668,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0.517875767294343,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,2.24685959107234,1.83000241127451,0,31.6360262749943,46.2844977767898,2.70124457927428,3.24482526135515,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4071069652835,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.823494773620054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55743152504579,0,0,0,0.608580364165509,1.4470629585145,2.03700681425136,0.575392274901621,0.162135226775035,3.84385978463314,7.18841032636773,4.46569137202204,4.99260276983297,8.5876818502018,4.12614051100398,7.71909634181387,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433947175744535,0,0,0,0.275936746304732,2.24770825982909,1.75817529888305,0.327869890753351,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,0.963963949265421,0.709700426041343,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0.41326727862668,0,0,0,0,0,0.496375471371293,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,18.8733346967943,20.0513429703789,25.6061241692095,59.6021792200459,36.2589070747056,39.1513050134447,53.5882231836822,52.1113770331835,50.2227502399265,0,0,0,0,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.631790158511746,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0.695603506861264
|short_description=p5@Nrn1
|short_description=p5@Nrn1
}}
}}

Latest revision as of 13:33, 1 October 2015

Short description:p5@Nrn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Nrn1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 145bp_to_NM_153529, uc007qcm.1_5end
EntrezGene:Nrn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Nrn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D531.64
cortex, neonate N30.CNhs11107.1392-42F246.28
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A459.60
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A753.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.22
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe6.11e-2110
visual cortex6.11e-2110
neocortex6.11e-2110
tube3.34e-17114
regional part of nervous system1.73e-1654
liver2.38e-1622
epithelial sac2.38e-1622
digestive gland2.38e-1622
epithelium of foregut-midgut junction2.38e-1622
anatomical boundary2.38e-1622
hepatobiliary system2.38e-1622
foregut-midgut junction2.38e-1622
hepatic diverticulum2.38e-1622
liver primordium2.38e-1622
septum transversum2.38e-1622
liver bud2.38e-1622
brain grey matter2.45e-1629
regional part of telencephalon2.45e-1629
telencephalon2.45e-1629
neural tube1.25e-1552
neural rod1.25e-1552
future spinal cord1.25e-1552
neural keel1.25e-1552
digestive tract diverticulum1.79e-1523
sac1.79e-1523
anatomical conduit1.87e-15122
regional part of brain2.04e-1546
anterior neural tube3.43e-1540
brain5.76e-1547
future brain5.76e-1547
gray matter7.50e-1534
regional part of forebrain4.48e-1439
forebrain4.48e-1439
future forebrain4.48e-1439
exocrine gland6.23e-1425
exocrine system6.23e-1425
regional part of cerebral cortex1.06e-1317
cerebral cortex1.01e-1221
cerebral hemisphere1.01e-1221
pallium1.01e-1221
central nervous system1.44e-1273
nervous system4.74e-1275
neurectoderm1.54e-1164
neural plate1.54e-1164
presumptive neural plate1.54e-1164
pre-chordal neural plate1.94e-1149
organ system subdivision1.83e-10194
epithelium1.87e-09174
ecto-epithelium2.23e-0973
cell layer3.09e-09176
ectoderm-derived structure4.05e-0895
ectoderm4.05e-0895
presumptive ectoderm4.05e-0895
regional part of midbrain6.41e-074
midbrain6.41e-074
presumptive midbrain6.41e-074
midbrain neural tube6.41e-074
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