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FFCP PHASE1:Mm9::chrX:12648272..12648295,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:12648272..12648295,+
|DHSsupport=NA
|short_description=p4@Usp9x
|DPIdataset=NA
|description=CAGE_peak_4_at_Usp9x_5end
|association_with_transcript=-328bp_to_ENSMUST00000169594,NM_009481,uc009srg.1,uc009srh.1,uc009sri.1_5end
|EntrezGene=22284
|EntrezGene=22284
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9PWA9,P70398,Q4FE56,Q8BS89,Q8C7T5
|UniProt=E9PWA9,P70398,Q4FE56,Q8BS89,Q8C7T5
|association_with_transcript=-328bp_to_ENSMUST00000169594,NM_009481,uc009srg.1,uc009srh.1,uc009sri.1_5end
|cluster_id=chrX:12648272..12648295,+
|description=CAGE_peak_4_at_Usp9x_5end
|id=chrX:12648272..12648295,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.26e-13!71;UBERON:0003075!1.26e-13!71;UBERON:0007284!1.26e-13!71;UBERON:0000033!8.35e-13!63;UBERON:0004121!4.53e-12!102;UBERON:0000924!4.53e-12!102;UBERON:0006601!4.53e-12!102;UBERON:0003056!6.50e-12!49;UBERON:0001017!9.92e-12!73;UBERON:0005743!9.92e-12!73;UBERON:0000073!1.15e-11!75;UBERON:0001016!1.15e-11!75;UBERON:0001049!1.39e-10!52;UBERON:0005068!1.39e-10!52;UBERON:0006241!1.39e-10!52;UBERON:0007135!1.39e-10!52;UBERON:0000955!5.11e-10!50;UBERON:0006238!5.11e-10!50;UBERON:0002616!1.85e-09!49;UBERON:0003080!1.08e-08!40;UBERON:0002780!2.62e-08!39;UBERON:0001890!2.62e-08!39;UBERON:0006240!2.62e-08!39;UBERON:0002020!3.34e-08!34;UBERON:0000153!7.99e-08!94;UBERON:0000956!1.28e-07!21;UBERON:0001869!1.28e-07!21;UBERON:0000203!1.28e-07!21;UBERON:0002791!1.45e-07!29;UBERON:0003528!1.45e-07!29;UBERON:0001893!1.45e-07!29;UBERON:0002021!3.07e-07!10;UBERON:0000411!3.07e-07!10;UBERON:0001950!3.07e-07!10;UBERON:0007811!4.68e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.99e-20,64;UBERON:0003075,4.99e-20,64;UBERON:0007284,4.99e-20,64;UBERON:0003056,1.55e-17,49;UBERON:0000956,1.67e-16,21;UBERON:0001869,1.67e-16,21;UBERON:0000203,1.67e-16,21;UBERON:0010371,1.83e-16,73;UBERON:0001049,4.79e-15,52;UBERON:0005068,4.79e-15,52;UBERON:0006241,4.79e-15,52;UBERON:0007135,4.79e-15,52;UBERON:0002020,5.94e-15,34;UBERON:0004121,9.53e-15,95;UBERON:0000924,9.53e-15,95;UBERON:0006601,9.53e-15,95;UBERON:0000955,1.74e-14,47;UBERON:0006238,1.74e-14,47;UBERON:0003528,2.02e-14,29;UBERON:0002791,2.02e-14,29;UBERON:0001893,2.02e-14,29;UBERON:0000073,3.36e-14,54;UBERON:0001017,5.51e-14,73;UBERON:0002021,1.01e-13,10;UBERON:0000411,1.01e-13,10;UBERON:0001950,1.01e-13,10;UBERON:0002619,2.12e-13,17;UBERON:0001016,2.15e-13,75;UBERON:0002616,2.58e-13,46;UBERON:0003080,9.15e-13,40;UBERON:0002780,6.12e-12,39;UBERON:0001890,6.12e-12,39;UBERON:0006240,6.12e-12,39;UBERON:0010314,2.81e-11,92
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0,0,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.917733760808408,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.65903379693564,0.540023753326763,1.68259969081106,0,0.441737081903227,3.06226998037385,1.34183659425531,0,0,0.766124028511126,1.0752457327937,0.395658863190582,0.731901148819277,1.56274011167028,0,0,0.45839474333043,2.06240009831567,1.28134512719193,0.931997229126503,0.302904773332736,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.563373679106722,0,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.461230994512117,0,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.75668478206928,4.1889341362691,0,0.239630249011841,0.599902730993408,0,1.04853447583376,0.915001205637253,2.63874139437015,1.21677024134594,2.04572365864264,1.0389402227978,0.811206315338788,0.81471491080253,0.124406970610093,0,0.420883711772948,1.30120442962704,0.689706313300419,1.26043490863744,0.60281927134286,1.63287597963187,1.40925092313335,1.3118241438362,1.03481348295606,0.646703978798527,1.51284864134255,1.05570674498369,0.657587197282725,0,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.700592054203017,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,4.42489833230923,0.330418782983798,0,0.639864751605702,0.928946687441754,0.644337306610467,0.403367049246685,0,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.342745537829186,1.1270773567308,0.610953983535943,0.581857461502877,0.771494018793504,0.316182685621286,0,0,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.651859905768103,1.18821560042632,0.234690248288502,0.837531287209079,1.19021820443007,0.975668239288994,0.157635144106191,0.44292937929755,1.2756381492599,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0.642202359951168,0.937693492737625,0.327869890753351,0.252470927204373,0.94652465824877,1.17131623288992,0.646270193198397,0.477937595905104,1.11399337041197,1.41538265394416,0.809621403349789,0,0.790575555893047,3.21321316421807,0.141940085208269,0.178065603667255,1.14020871547503,0.164970122972535,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0.709360934569094,0.356737635204141,1.15184314421485,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.645857706783622,0.482503399425247,0.238744688006273,0.164140899745061,0,1.11255181206306,0,0.619160603889667,0.370389054739423,0,0,0,0,0.139951452323658,0.276399947608848,0,0.474503990371703,0.406638934253697,0.756037385752609,0.209088296014469,1.09181281873089,0.674321731924103,0.578574190077352,0,0,0,0.56369293868419,0.897099276263873,0.992750942742586,1.16670713006429,0.904118764344118,0.337912250981556,1.17357238645754,0.5208175393758,0.734015410979976,0,0.576060012515731,0,0,0.205421914329655,0.51968329191118,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.38983152295901,0,0.350630706544707,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,3.95326289831947,1.38097570952153,1.14579102687879,3.43706364687375,1.37016503954128,0.755393897389701,3.37511250115903,1.80128481289688,3.17199686288943,1.55328093525546,1.03787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,0.943131706930381,1.40462261204824,0.89635213366817,0.689225627467359,0,0.927074607558844,0.77163688185482,0.824171801606613,0.883193520806384,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,0.846984423737976,1.09998990259179,0.73171189149109,1.05227884575137,1.08643291076689,0.561142271657738,1.18635018124174,0.985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,1.50409737833809,0.382576664137687,0.661774257358546,0.695603506861264
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0,0,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.917733760808408,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0.336093799142464,0,0.286533439938757,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.65903379693564,0.540023753326763,1.68259969081106,0,0.441737081903227,3.06226998037385,1.34183659425531,0,0,0.766124028511126,1.0752457327937,0.395658863190582,0.731901148819277,1.56274011167028,0,0,0.45839474333043,2.06240009831567,1.28134512719193,0.931997229126503,0.302904773332736,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.563373679106722,0,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.461230994512117,0,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.75668478206928,4.1889341362691,0,0.239630249011841,0.599902730993408,0,1.04853447583376,0.915001205637253,2.63874139437015,1.21677024134594,2.04572365864264,1.0389402227978,0.811206315338788,0.81471491080253,0.124406970610093,0,0.420883711772948,1.30120442962704,0.689706313300419,1.26043490863744,0.60281927134286,1.63287597963187,1.40925092313335,1.3118241438362,1.03481348295606,0.646703978798527,1.51284864134255,1.05570674498369,0.657587197282725,0,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0.393528463494808,0.154267112887378,0.232533944750408,0,0.700592054203017,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,4.42489833230923,0.330418782983798,0,0.639864751605702,0.928946687441754,0.644337306610467,0.403367049246685,0,0.380451252225118,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.342745537829186,1.1270773567308,0.610953983535943,0.581857461502877,0.771494018793504,0.316182685621286,0,0,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.651859905768103,1.18821560042632,0.234690248288502,0.837531287209079,1.19021820443007,0.975668239288994,0.157635144106191,0.44292937929755,1.2756381492599,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0.642202359951168,0.937693492737625,0.327869890753351,0.252470927204373,0.94652465824877,1.17131623288992,0.646270193198397,0.477937595905104,1.11399337041197,1.41538265394416,0.809621403349789,0,0.790575555893047,3.21321316421807,0.141940085208269,0.178065603667255,1.14020871547503,0.164970122972535,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0.709360934569094,0.356737635204141,1.15184314421485,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.645857706783622,0.482503399425247,0.238744688006273,0.164140899745061,0,1.11255181206306,0,0.619160603889667,0.370389054739423,0,0,0,0,0.139951452323658,0.276399947608848,0,0.474503990371703,0.406638934253697,0.756037385752609,0.209088296014469,1.09181281873089,0.674321731924103,0.578574190077352,0,0,0,0.56369293868419,0.897099276263873,0.992750942742586,1.16670713006429,0.904118764344118,0.337912250981556,1.17357238645754,0.5208175393758,0.734015410979976,0,0.576060012515731,0,0,0.205421914329655,0.51968329191118,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.38983152295901,0,0.350630706544707,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,3.95326289831947,1.38097570952153,1.14579102687879,3.43706364687375,1.37016503954128,0.755393897389701,3.37511250115903,1.80128481289688,3.17199686288943,1.55328093525546,1.03787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,0.943131706930381,1.40462261204824,0.89635213366817,0.689225627467359,0,0.927074607558844,0.77163688185482,0.824171801606613,0.883193520806384,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,0.846984423737976,1.09998990259179,0.73171189149109,1.05227884575137,1.08643291076689,0.561142271657738,1.18635018124174,0.985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,1.50409737833809,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p4@Usp9x
}}
}}

Latest revision as of 13:46, 1 October 2015

Short description:p4@Usp9x
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Usp9x_5end
Coexpression cluster:NA
Association with transcript: -328bp_to_ENSMUST00000169594, NM_009481, uc009srg.1, uc009srh.1, uc009sri.1_5end
EntrezGene:Usp9x
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Usp9x

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.99e-2064
neural plate4.99e-2064
presumptive neural plate4.99e-2064
pre-chordal neural plate1.55e-1749
cerebral cortex1.67e-1621
cerebral hemisphere1.67e-1621
pallium1.67e-1621
ecto-epithelium1.83e-1673
neural tube4.79e-1552
neural rod4.79e-1552
future spinal cord4.79e-1552
neural keel4.79e-1552
gray matter5.94e-1534
ectoderm-derived structure9.53e-1595
ectoderm9.53e-1595
presumptive ectoderm9.53e-1595
brain1.74e-1447
future brain1.74e-1447
brain grey matter2.02e-1429
regional part of telencephalon2.02e-1429
telencephalon2.02e-1429
regional part of nervous system3.36e-1454
central nervous system5.51e-1473
occipital lobe1.01e-1310
visual cortex1.01e-1310
neocortex1.01e-1310
regional part of cerebral cortex2.12e-1317
nervous system2.15e-1375
regional part of brain2.58e-1346
anterior neural tube9.15e-1340
regional part of forebrain6.12e-1239
forebrain6.12e-1239
future forebrain6.12e-1239
structure with developmental contribution from neural crest2.81e-1192
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