FFCP PHASE1:Mm9::chr13:37918773..37918818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68750 | |EntrezGene=68750 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHQ4,Q3UH06 | |UniProt=Q3UHQ4,Q3UH06 | ||
|association_with_transcript=0bp_to_ENSMUST00000124373,ENSMUST00000149745,NM_001177868,NR_033615,uc007qcx.2,uc007qcy.2_5end | |association_with_transcript=0bp_to_ENSMUST00000124373,ENSMUST00000149745,NM_001177868,NR_033615,uc007qcx.2,uc007qcy.2_5end | ||
|cluster_id=chr13:37918773..37918818,+ | |||
|description=CAGE_peak_3_at_Rreb1_5end | |description=CAGE_peak_3_at_Rreb1_5end | ||
|id=chr13:37918773..37918818,+ | |id=chr13:37918773..37918818,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.47e-09!27;UBERON:0000926!2.92e-09!193;UBERON:0004120!2.92e-09!193;UBERON:0006603!2.92e-09!193;UBERON:0005153!8.88e-09!17;UBERON:0002048!1.43e-08!14;UBERON:0000117!1.43e-08!14;UBERON:0000171!1.43e-08!14;UBERON:0000170!1.43e-08!14;UBERON:0005597!1.43e-08!14;UBERON:0000118!1.43e-08!14;UBERON:0000464!2.25e-08!57;UBERON:0009569!3.69e-08!66;UBERON:0005178!1.49e-07!17;UBERON:0005181!1.49e-07!17;UBERON:0002224!1.49e-07!17;UBERON:0000915!1.49e-07!17;UBERON:0008947!1.49e-07!17;UBERON:0003258!1.49e-07!17;UBERON:0000466!3.56e-07!79;UBERON:0003104!8.69e-07!131;UBERON:0009142!8.69e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,8.31e-09,17;UBERON:0002048,1.34e-08,14;UBERON:0000117,1.34e-08,14;UBERON:0000171,1.34e-08,14;UBERON:0000170,1.34e-08,14;UBERON:0005597,1.34e-08,14;UBERON:0000118,1.34e-08,14;UBERON:0005177,3.84e-08,79;UBERON:0009569,4.51e-08,66;UBERON:0002100,6.38e-08,90;UBERON:0005178,1.41e-07,17;UBERON:0005181,1.41e-07,17;UBERON:0002224,1.41e-07,17;UBERON:0000915,1.41e-07,17;UBERON:0008947,1.41e-07,17;UBERON:0003258,1.41e-07,17;UBERON:0005157,6.27e-07,20 | |||
|phase1_expression=1.12104192973356,3.14077866875425,3.63999391511629,3.93203474698879,1.50268718983904,3.18970616632591,3.73780224952841,0.774739940649458,6.47628121897667,5.14941957908386,0.856089841127525,0.957265907944037,0.684802919724823,0.699363219351979,0,1.21485160433896,1.39912375625629,0.630924330716475,0.274228867211478,1.27316895539409,3.99703463710028,1.98581902401771,2.35079810225042,3.35984087866154,2.06468352960453,1.14846392823004,2.58457197695445,2.80112602491656,2.28028103347649,3.52842181663903,1.10865255327652,3.17515336729816,3.07532393792285,0,0.577703239502549,1.49611180822643,1.63335485009895,3.34825304589526,2.3440060335714,3.14114246384279,3.52938892818609,2.73218193983378,4.36959317728038,3.02152363141385,2.83855407414641,2.75320128242522,3.9119567217402,0.218025156380447,1.5378032791413,1.55543919259427,1.81982348112971,1.43752564364972,0.671130424230945,1.45072428402269,1.00828139742739,3.08711323243136,2.29226751951005,5.15672092277442,0.404632921719196,0,0,1.69422266034566,2.66788438833342,0.449949858640699,4.94433181283487,2.1314403448383,2.69640099466564,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.287536413054709,0,2.20231761998777,1.40456071893706,0.921639199537461,0.131886287730194,0.182975287204819,1.04182674111352,1.11673199600552,0.56276261003168,0.916789486660861,0.294628585473668,1.28134512719193,0.372798891650601,2.57469057332826,3.17400552448499,8.69593466105033,0.860423876981386,1.3599426674155,4.31762553310254,4.54843492213368,4.03224198387602,2.10666630197628,2.72688516124892,2.33807404142582,1.7666978725517,0.845060518660083,5.13305909657271,2.54805239706646,0,3.24736561516821,2.53359865475099,3.53867111510348,3.53970027129086,1.8125651855302,6.38301197978747,4.8575891494518,4.26251669636998,5.07354093963329,6.17962826265753,6.58496759959947,4.52399728786832,13.8429181931249,7.08536848907567,5.30766331169925,3.88240439873782,4.19598885074748,3.87900202508178,1.86391761218122,0.878342391034642,0.83778682725382,2.29911349687732,1.91704199209472,0.599902730993408,3.43089613097275,0.299581278809645,0.915001205637253,0.125654352112864,0.869121600961382,0.255715457330331,1.66230435647648,1.62241263067758,2.03678727700633,3.85661608891288,6.31806896084187,5.26104639716185,1.56144531555244,1.37941262660084,2.16074555766419,1.35634336052144,2.31324097114515,2.3060469651273,2.90475346135159,3.10444044886819,1.29340795759705,1.89106080167819,4.04687585577082,5.04150184583422,5.56094498451196,10.7958171621872,6.1734640922383,3.58261680273288,1.40442637462647,3.08817488537658,1.98914449576915,1.65700618028402,2.34526059981096,1.44049649168812,3.07768156260773,3.14822770795846,3.5481435964097,3.48800917125612,4.02410102099429,2.6856028744449,3.78487654801005,4.26835406605648,4.86412857275134,2.33919979880532,3.29325172936576,3.22095405024892,1.89260953707715,0.102904612379284,1.98251269790279,4.23120906661671,2.98603550749328,4.64473343720877,3.8660238396628,3.22693639397348,3.55804870151792,4.1849637744763,5.21981967698963,5.43506550589236,3.77002813200404,3.97912944082302,4.874102177978,0,1.94524244887225,1.1948476395262,3.79335801906163,3.77020091612105,5.63538678365402,4.88763186828754,5.23671715352589,3.99774173374816,5.75452487830741,5.16635517928608,4.39596437955849,1.97435462274881,7.41131567717872,1.50160595144485,0.786235980452812,2.02375901146368,1.42002084971952,1.20588579876208,1.78238096246994,4.02774592431135,3.40483976227574,2.47105271869273,2.87536413054709,6.32639611036456,4.36852742360385,4.04126204715379,2.87035861635059,1.4473305640901,5.54259570499814,3.60033682363921,5.0519142697028,5.94107800213158,7.97946844180907,14.573044397438,12.6163129669587,11.5128852236101,11.9802709520705,9.7444463445461,10.5240147313941,7.53771247692395,6.21665934717224,6.65385669474953,1.50791283939272,1.08781136763742,7.86822836830458,16.0043312856745,0.481651769963376,0.35163505977661,0.163934945376675,2.52470927204373,0.315508219416257,2.73307121007647,2.80050417052639,3.82350076724083,2.67358408898873,3.67999490025482,2.02405350837447,1.16902343164525,1.18586333383957,2.57057053137446,5.25178315270594,3.5613120733451,3.25773918707152,5.93892442701128,1.32745138339963,5.34117399540959,2.41858845571801,3.39489143560617,4.42952839321159,4.91896236710284,3.10113951801865,4.36240475373007,3.92147116223193,0.948110273807448,4.21674434299995,1.03135543248187,2.7235168460303,1.08036656418786,0.905510786479282,1.50035924522115,1.95074257006501,3.21063871683727,1.15184314421485,1.522324745573,4.22409074514679,5.71946591332314,1.32317038832977,10.3878339353132,6.78150592122803,9.52944213864862,6.80422360817878,7.2221995887827,5.53813589596716,0.370850604021019,1.53783792718067,7.22354037871279,7.40778109478847,2.26042148405629,1.6403307326523,2.28778173206523,3.39956859987711,1.6794174278839,3.04039942369732,0.954670618015114,2.37251995185852,4.26970880966382,3.67218158794124,3.55450103224597,4.367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| |phase1_expression=1.12104192973356,3.14077866875425,3.63999391511629,3.93203474698879,1.50268718983904,3.18970616632591,3.73780224952841,0.774739940649458,6.47628121897667,5.14941957908386,0.856089841127525,0.957265907944037,0.684802919724823,0.699363219351979,0,1.21485160433896,1.39912375625629,0.630924330716475,0.274228867211478,1.27316895539409,3.99703463710028,1.98581902401771,2.35079810225042,3.35984087866154,2.06468352960453,1.14846392823004,2.58457197695445,2.80112602491656,2.28028103347649,3.52842181663903,1.10865255327652,3.17515336729816,3.07532393792285,0,0.577703239502549,1.49611180822643,1.63335485009895,3.34825304589526,2.3440060335714,3.14114246384279,3.52938892818609,2.73218193983378,4.36959317728038,3.02152363141385,2.83855407414641,2.75320128242522,3.9119567217402,0.218025156380447,1.5378032791413,1.55543919259427,1.81982348112971,1.43752564364972,0.671130424230945,1.45072428402269,1.00828139742739,3.08711323243136,2.29226751951005,5.15672092277442,0.404632921719196,0,0,1.69422266034566,2.66788438833342,0.449949858640699,4.94433181283487,2.1314403448383,2.69640099466564,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,0.285650984403804,1.10434270475807,0.122490799214954,0.287536413054709,0,2.20231761998777,1.40456071893706,0.921639199537461,0.131886287730194,0.182975287204819,1.04182674111352,1.11673199600552,0.56276261003168,0.916789486660861,0.294628585473668,1.28134512719193,0.372798891650601,2.57469057332826,3.17400552448499,8.69593466105033,0.860423876981386,1.3599426674155,4.31762553310254,4.54843492213368,4.03224198387602,2.10666630197628,2.72688516124892,2.33807404142582,1.7666978725517,0.845060518660083,5.13305909657271,2.54805239706646,0,3.24736561516821,2.53359865475099,3.53867111510348,3.53970027129086,1.8125651855302,6.38301197978747,4.8575891494518,4.26251669636998,5.07354093963329,6.17962826265753,6.58496759959947,4.52399728786832,13.8429181931249,7.08536848907567,5.30766331169925,3.88240439873782,4.19598885074748,3.87900202508178,1.86391761218122,0.878342391034642,0.83778682725382,2.29911349687732,1.91704199209472,0.599902730993408,3.43089613097275,0.299581278809645,0.915001205637253,0.125654352112864,0.869121600961382,0.255715457330331,1.66230435647648,1.62241263067758,2.03678727700633,3.85661608891288,6.31806896084187,5.26104639716185,1.56144531555244,1.37941262660084,2.16074555766419,1.35634336052144,2.31324097114515,2.3060469651273,2.90475346135159,3.10444044886819,1.29340795759705,1.89106080167819,4.04687585577082,5.04150184583422,5.56094498451196,10.7958171621872,6.1734640922383,3.58261680273288,1.40442637462647,3.08817488537658,1.98914449576915,1.65700618028402,2.34526059981096,1.44049649168812,3.07768156260773,3.14822770795846,3.5481435964097,3.48800917125612,4.02410102099429,2.6856028744449,3.78487654801005,4.26835406605648,4.86412857275134,2.33919979880532,3.29325172936576,3.22095405024892,1.89260953707715,0.102904612379284,1.98251269790279,4.23120906661671,2.98603550749328,4.64473343720877,3.8660238396628,3.22693639397348,3.55804870151792,4.1849637744763,5.21981967698963,5.43506550589236,3.77002813200404,3.97912944082302,4.874102177978,0,1.94524244887225,1.1948476395262,3.79335801906163,3.77020091612105,5.63538678365402,4.88763186828754,5.23671715352589,3.99774173374816,5.75452487830741,5.16635517928608,4.39596437955849,1.97435462274881,7.41131567717872,1.50160595144485,0.786235980452812,2.02375901146368,1.42002084971952,1.20588579876208,1.78238096246994,4.02774592431135,3.40483976227574,2.47105271869273,2.87536413054709,6.32639611036456,4.36852742360385,4.04126204715379,2.87035861635059,1.4473305640901,5.54259570499814,3.60033682363921,5.0519142697028,5.94107800213158,7.97946844180907,14.573044397438,12.6163129669587,11.5128852236101,11.9802709520705,9.7444463445461,10.5240147313941,7.53771247692395,6.21665934717224,6.65385669474953,1.50791283939272,1.08781136763742,7.86822836830458,16.0043312856745,0.481651769963376,0.35163505977661,0.163934945376675,2.52470927204373,0.315508219416257,2.73307121007647,2.80050417052639,3.82350076724083,2.67358408898873,3.67999490025482,2.02405350837447,1.16902343164525,1.18586333383957,2.57057053137446,5.25178315270594,3.5613120733451,3.25773918707152,5.93892442701128,1.32745138339963,5.34117399540959,2.41858845571801,3.39489143560617,4.42952839321159,4.91896236710284,3.10113951801865,4.36240475373007,3.92147116223193,0.948110273807448,4.21674434299995,1.03135543248187,2.7235168460303,1.08036656418786,0.905510786479282,1.50035924522115,1.95074257006501,3.21063871683727,1.15184314421485,1.522324745573,4.22409074514679,5.71946591332314,1.32317038832977,10.3878339353132,6.78150592122803,9.52944213864862,6.80422360817878,7.2221995887827,5.53813589596716,0.370850604021019,1.53783792718067,7.22354037871279,7.40778109478847,2.26042148405629,1.6403307326523,2.28778173206523,3.39956859987711,1.6794174278839,3.04039942369732,0.954670618015114,2.37251995185852,4.26970880966382,3.67218158794124,3.55450103224597,4.367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| ||
|short_description=p3@Rreb1 | |short_description=p3@Rreb1 | ||
}} | }} |
Latest revision as of 13:49, 1 October 2015
Short description: | p3@Rreb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rreb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000124373, ENSMUST00000149745, NM_001177868, NR_033615, uc007qcx.2, uc007qcy.2_5end |
EntrezGene: | Rreb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 8.31e-09 | 17 |
lung | 1.34e-08 | 14 |
respiratory tube | 1.34e-08 | 14 |
respiration organ | 1.34e-08 | 14 |
pair of lungs | 1.34e-08 | 14 |
lung primordium | 1.34e-08 | 14 |
lung bud | 1.34e-08 | 14 |
trunk region element | 3.84e-08 | 79 |
subdivision of trunk | 4.51e-08 | 66 |
trunk | 6.38e-08 | 90 |
thoracic cavity element | 1.41e-07 | 17 |
thoracic segment organ | 1.41e-07 | 17 |
thoracic cavity | 1.41e-07 | 17 |
thoracic segment of trunk | 1.41e-07 | 17 |
respiratory primordium | 1.41e-07 | 17 |
endoderm of foregut | 1.41e-07 | 17 |
epithelial fold | 6.27e-07 | 20 |