FFCP PHASE1:Mm9::chr5:106887428..106887437,-: Difference between revisions
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|id=chr5:106887428..106887437,-
|short_description=p4@Barhl2
|description=CAGE_peak_4_at_Barhl2_5end
|association_with_transcript=21bp_to_ENSMUST00000086795_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=104382 | |EntrezGene=104382 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1201 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VIB5 | |UniProt=Q8VIB5 | ||
|association_with_transcript=21bp_to_ENSMUST00000086795_5end | |||
|cluster_id=chr5:106887428..106887437,- | |||
|description=CAGE_peak_4_at_Barhl2_5end | |||
|id=chr5:106887428..106887437,- | |||
|ontology_enrichment_celltype=CL:0000117!2.48e-14!23;CL:0000337!2.48e-14!23;CL:0000540!7.69e-09!33;CL:0000047!7.69e-09!33;CL:0000031!7.69e-09!33;CL:0000404!7.69e-09!33;CL:0002319!3.64e-08!43;CL:0000221!6.94e-08!44;CL:0000133!6.94e-08!44;CL:0000120!3.73e-07!3;CL:0000393!6.23e-07!39;CL:0000211!6.23e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,4.47e-25,3;CL:0002613,2.51e-11,3;CL:0000117,9.05e-09,23;CL:0000337,9.05e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.30e-12!9;UBERON:0000019!3.30e-12!9;UBERON:0000047!3.30e-12!9;UBERON:0004088!3.30e-12!9;UBERON:0002104!3.30e-12!9;UBERON:0001456!3.30e-12!9;UBERON:0003072!3.30e-12!9;UBERON:0003071!3.30e-12!9;UBERON:0004128!3.30e-12!9;UBERON:0000033!1.47e-11!63;UBERON:0004121!1.63e-11!102;UBERON:0000924!1.63e-11!102;UBERON:0006601!1.63e-11!102;UBERON:0001444!1.08e-09!11;UBERON:0002346!1.89e-09!71;UBERON:0003075!1.89e-09!71;UBERON:0007284!1.89e-09!71;UBERON:0001017!2.37e-09!73;UBERON:0005743!2.37e-09!73;UBERON:0003056!2.49e-09!49;UBERON:0000073!6.20e-09!75;UBERON:0001016!6.20e-09!75;UBERON:0000020!9.43e-09!12;UBERON:0001032!9.43e-09!12;UBERON:0004456!9.43e-09!12;UBERON:0005085!5.88e-08!13;UBERON:0007811!8.23e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002037,2.53e-09,4;UBERON:0002680,2.53e-09,4;UBERON:0001895,2.53e-09,4;UBERON:0010092,2.53e-09,4;UBERON:0006215,2.53e-09,4;UBERON:0001017,2.67e-08,73;UBERON:0001016,4.65e-08,75;UBERON:0000369,3.73e-07,5;UBERON:0002435,3.73e-07,5;UBERON:0000204,3.73e-07,5;UBERON:0010082,3.73e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,2.63011399117477,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,1.05509030184155,1.55528994124096,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,5.65506108396329,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,1.76894897793452,1.15302348256365,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.387479470433193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,2.63011399117477,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,1.05509030184155,1.55528994124096,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,5.65506108396329,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,1.76894897793452,1.15302348256365,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.387479470433193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p4@Barhl2 | |||
}} | }} |
Latest revision as of 13:53, 1 October 2015
Short description: | p4@Barhl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Barhl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1201 |
Association with transcript: | 21bp_to_ENSMUST00000086795_5end |
EntrezGene: | Barhl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 4.47e-25 | 3 |
striatum neuron | 2.51e-11 | 3 |
CNS neuron (sensu Vertebrata) | 9.05e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.05e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
cerebellum | 2.53e-09 | 4 |
regional part of metencephalon | 2.53e-09 | 4 |
metencephalon | 2.53e-09 | 4 |
future metencephalon | 2.53e-09 | 4 |
rhombic lip | 2.53e-09 | 4 |
central nervous system | 2.67e-08 | 73 |
nervous system | 4.65e-08 | 75 |
corpus striatum | 3.73e-07 | 5 |
striatum | 3.73e-07 | 5 |
ventral part of telencephalon | 3.73e-07 | 5 |
future corpus striatum | 3.73e-07 | 5 |