FFCP PHASE1:Mm9::chr6:54766699..54766736,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=387524 | |EntrezGene=387524 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q71FD5 | |UniProt=Q71FD5 | ||
|association_with_transcript=-173bp_to_ENSMUST00000079869,NM_199143,uc009cae.2_5end | |association_with_transcript=-173bp_to_ENSMUST00000079869,NM_199143,uc009cae.2_5end | ||
|cluster_id=chr6:54766699..54766736,+ | |||
|description=CAGE_peak_2_at_Znrf2_5end | |description=CAGE_peak_2_at_Znrf2_5end | ||
|id=chr6:54766699..54766736,+ | |id=chr6:54766699..54766736,+ | ||
|ontology_enrichment_celltype=CL:0000988!6.34e-10!32;CL:0002032!6.34e-10!32;CL:0000037!6.34e-10!32;CL:0000566!6.34e-10!32;CL:0000837!6.34e-10!32;CL:0002320!1.44e-09!46;CL:0000134!1.44e-09!46;CL:0002031!3.01e-08!25;CL:0000838!6.47e-08!12;CL:0000063!1.10e-07!66;CL:0000738!2.21e-07!17;CL:0002087!2.21e-07!17;CL:0000084!2.40e-07!11;CL:0000827!2.40e-07!11;CL:0000219!8.57e-07!54;CL:0000791!8.65e-07!9;CL:0000789!8.65e-07!9;CL:0002420!8.65e-07!9;CL:0002419!8.65e-07!9;CL:0000790!8.65e-07!9 | |ontology_enrichment_celltype=CL:0000988!6.34e-10!32;CL:0002032!6.34e-10!32;CL:0000037!6.34e-10!32;CL:0000566!6.34e-10!32;CL:0000837!6.34e-10!32;CL:0002320!1.44e-09!46;CL:0000134!1.44e-09!46;CL:0002031!3.01e-08!25;CL:0000838!6.47e-08!12;CL:0000063!1.10e-07!66;CL:0000738!2.21e-07!17;CL:0002087!2.21e-07!17;CL:0000084!2.40e-07!11;CL:0000827!2.40e-07!11;CL:0000219!8.57e-07!54;CL:0000791!8.65e-07!9;CL:0000789!8.65e-07!9;CL:0002420!8.65e-07!9;CL:0002419!8.65e-07!9;CL:0000790!8.65e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.34e-10,32;CL:0002032,6.34e-10,32;CL:0000037,6.34e-10,32;CL:0000837,6.34e-10,32;CL:0002320,1.44e-09,46;CL:0000134,1.44e-09,46;CL:0002031,3.01e-08,25;CL:0000838,6.47e-08,12;CL:0000738,2.21e-07,17;CL:0002087,2.21e-07,17;CL:0000084,2.40e-07,11;CL:0000827,2.40e-07,11;CL:0000219,8.57e-07,54;CL:0000791,8.65e-07,9;CL:0000789,8.65e-07,9;CL:0002420,8.65e-07,9;CL:0002419,8.65e-07,9;CL:0000790,8.65e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.91e-14!70;UBERON:0003929!1.74e-12!55;UBERON:0005057!3.61e-10!51;UBERON:0002390!4.37e-10!45;UBERON:0003061!4.37e-10!45;UBERON:0002193!6.66e-10!48;UBERON:0002384!1.44e-09!46;UBERON:0000490!1.73e-09!66;UBERON:0005911!4.56e-08!69;UBERON:0001007!3.35e-07!128;UBERON:0001555!3.35e-07!128;UBERON:0007026!3.35e-07!128;UBERON:0004921!4.55e-07!126;UBERON:0004185!4.55e-07!126;UBERON:0006562!6.74e-07!24;UBERON:0001557!6.74e-07!24;UBERON:0001042!6.74e-07!24;UBERON:0008814!6.74e-07!24;UBERON:0009145!6.74e-07!24;UBERON:0003408!7.62e-07!24;UBERON:0002370!8.18e-07!23;UBERON:0000974!8.18e-07!23;UBERON:0004807!8.18e-07!23;UBERON:0005058!8.18e-07!23;UBERON:0003351!8.18e-07!23;UBERON:0009113!8.18e-07!23;UBERON:0003295!8.18e-07!23;UBERON:0009722!8.18e-07!23;UBERON:0005562!8.18e-07!23;UBERON:0007690!8.18e-07!23;UBERON:0004119!8.96e-07!130;UBERON:0000925!8.96e-07!130;UBERON:0006595!8.96e-07!130 | |ontology_enrichment_uberon=UBERON:0002405!2.91e-14!70;UBERON:0003929!1.74e-12!55;UBERON:0005057!3.61e-10!51;UBERON:0002390!4.37e-10!45;UBERON:0003061!4.37e-10!45;UBERON:0002193!6.66e-10!48;UBERON:0002384!1.44e-09!46;UBERON:0000490!1.73e-09!66;UBERON:0005911!4.56e-08!69;UBERON:0001007!3.35e-07!128;UBERON:0001555!3.35e-07!128;UBERON:0007026!3.35e-07!128;UBERON:0004921!4.55e-07!126;UBERON:0004185!4.55e-07!126;UBERON:0006562!6.74e-07!24;UBERON:0001557!6.74e-07!24;UBERON:0001042!6.74e-07!24;UBERON:0008814!6.74e-07!24;UBERON:0009145!6.74e-07!24;UBERON:0003408!7.62e-07!24;UBERON:0002370!8.18e-07!23;UBERON:0000974!8.18e-07!23;UBERON:0004807!8.18e-07!23;UBERON:0005058!8.18e-07!23;UBERON:0003351!8.18e-07!23;UBERON:0009113!8.18e-07!23;UBERON:0003295!8.18e-07!23;UBERON:0009722!8.18e-07!23;UBERON:0005562!8.18e-07!23;UBERON:0007690!8.18e-07!23;UBERON:0004119!8.96e-07!130;UBERON:0000925!8.96e-07!130;UBERON:0006595!8.96e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.72e-12,55;UBERON:0002390,4.34e-10,45;UBERON:0003061,4.34e-10,45;UBERON:0002193,6.60e-10,48;UBERON:0002405,6.60e-10,48;UBERON:0002384,1.44e-09,46;UBERON:0000490,1.72e-09,66;UBERON:0001007,4.52e-08,116;UBERON:0001555,4.52e-08,116;UBERON:0007026,4.52e-08,116;UBERON:0005911,4.53e-08,69;UBERON:0004921,6.12e-08,114;UBERON:0004119,1.38e-07,118;UBERON:0000925,1.38e-07,118;UBERON:0006595,1.38e-07,118;UBERON:0006562,6.68e-07,24;UBERON:0001557,6.68e-07,24;UBERON:0001042,6.68e-07,24;UBERON:0008814,6.68e-07,24;UBERON:0009145,6.68e-07,24;UBERON:0003408,7.55e-07,24;UBERON:0002370,8.10e-07,23;UBERON:0000974,8.10e-07,23;UBERON:0004807,8.10e-07,23;UBERON:0005058,8.10e-07,23;UBERON:0003351,8.10e-07,23;UBERON:0009113,8.10e-07,23;UBERON:0003295,8.10e-07,23;UBERON:0009722,8.10e-07,23;UBERON:0005562,8.10e-07,23;UBERON:0007690,8.10e-07,23 | |||
|phase1_expression=3.52327463630547,6.97950815278722,9.09998478779072,13.0059610861937,11.520601788766,9.9048770428015,11.6806320297763,20.2723617803275,27.1722233752717,27.3855495796732,13.0125655851384,15.9544317990673,25.6801094896809,29.8103572248781,7.99463428357591,7.08663435864391,2.09868563438444,15.6153771852328,18.2362196695633,11.4585205985468,28.4044589104573,13.8014422169231,9.66439219814061,6.07971206614945,7.79991555628378,9.18771142584032,8.18447792702242,5.60225204983311,10.4512880701006,11.8454160987167,8.64748991555688,4.44521471421742,4.92051830067656,15.8481681015439,8.08784535303569,8.31173226792462,8.77928231928187,13.393012183581,15.626706890476,12.0410461113974,12.9410927366823,12.9778642142105,13.1087795318411,3.14742044938943,3.34543873024398,3.48738829107195,5.47673941043627,3.05235218932625,4.39372365468944,4.08302788055995,2.37976916763116,4.31257693094915,18.6238692724087,29.7398478224651,29.5762543245368,1.80081605225163,6.30373567865265,1.03134418455488,5.66486090406874,7.40587370980846,3.1691570175309,4.40497891689872,3.55717918444456,13.0485459005803,17.7995945262055,13.4991221839759,7.49000276296012,8.06858441175265,22.7080250955566,24.8410926530311,23.7667206327062,3.42781181284564,1.98781686856452,13.4739879136449,11.0222291670972,12.8690630125403,2.20231761998777,2.29837208553338,2.4577045320999,4.74790635828698,4.48289453651807,7.29278718779464,3.35019598801657,2.8138130501584,2.59757021220577,5.59794312399969,3.55929201997757,3.72798891650601,4.69502398665741,4.38315048619356,11.5945795480671,10.3250865237766,10.879541339324,17.2705021324101,13.6453047664011,8.06448396775204,11.6568868709354,2.55645483867087,1.81850203222008,1.06001872353102,2.67602497575693,1.28326477414318,0,0,3.030874574157,3.54703811665138,6.0662933401774,11.5325718516251,5.43769555659061,6.23456984072264,3.12273588179045,3.04465478312141,5.07354093963329,4.37095657602605,5.99702406392095,8.41966161908826,10.1349936771093,7.80836527367523,11.4999371753484,4.69123864847487,5.96272099843063,5.81850303762267,5.59175283654366,2.63502717310392,1.8850203613211,7.91916871146633,23.4837644031604,16.7972764678154,15.1213570216947,2.24685959107234,1.37250180845588,9.42407640846483,2.43354048269187,3.06858548796397,2.90903262383384,2.59586020908412,1.93494791315601,8.9573018839267,5.81262344397452,17.8875577503503,1.82168620147785,2.75882525320168,3.42118046630164,2.56198190320716,4.62648194229029,3.97152532883034,3.93547243150861,6.46758426847539,2.37124792226126,2.45837904218165,2.46331573829528,2.41115305670332,3.33656699070717,5.2237824978325,4.7329891373827,2.9855140022774,11.937624184325,10.0365683774739,16.1973194655488,2.27838349789052,2.81431271977315,3.06105504483725,3.78791576936336,4.32881309844288,2.00547246753592,3.25547522650571,4.29237442239391,5.25444040652263,4.93679549740441,4.76085645829376,6.16122952548504,3.65499968563331,6.58650345873152,5.36825675041487,3.99550902271842,30.1510514271303,8.59088835757875,7.1401652999157,2.13288250535234,1.39342003116263,6.95884291139304,7.86565746031036,9.56225588532942,5.32631753115166,8.54152310780121,6.58795818896044,7.54005626400809,5.76973768919337,8.57841983324129,8.08937467788799,5.83572734661674,7.96565093017469,1.89667900953082,1.82797620175566,3.38123207019241,4.48032921259691,5.04276466635827,5.89140887078676,7.90456714053216,7.38050739898011,10.6759134932135,9.74837594982224,11.5616524563988,6.67380422864376,7.86235980452812,5.39669069723649,6.49152388443209,8.20002343158217,7.12952384987975,7.76779571117189,6.64754429777645,6.58947391651396,7.18841032636773,7.81495990103857,9.67316786655138,13.8918382870911,15.4281775628844,14.473305640901,6.46636165583116,2.4633883530163,2.77040459951444,3.56464680127895,3.75504397261603,3.85264392116176,2.38043640886014,6.04914308359176,4.09851374676097,2.43611158613652,7.01600982092943,5.40748938561935,5.87128938344045,4.91806799177139,21.1107797514981,10.3342079925555,34.4234991113325,27.869611376778,1.9266070798535,1.99259867206745,3.11476396215683,5.80683132570058,2.83957397474631,3.12350995437311,2.58508077279359,3.82350076724083,3.7875774594007,3.96307143104365,4.85772842009873,2.04579100537918,5.53402889125133,1.60660658210904,10.6455063906201,2.13678724400706,3.90928702448583,6.43383479592888,10.619611067197,4.61283208694465,3.32555912661226,3.58349651536206,6.20133975049623,6.14870295887855,7.23599220871019,7.99774204850512,4.63446591900138,4.42451461110142,5.27093042874994,2.06271086496374,5.7874732978144,1.62054984628179,1.29358683782755,2.14337035031592,2.12808280370728,0.891844088010353,1.64549020602121,2.13125464380219,4.22409074514679,3.1774810629573,5.51320995137405,13.1909002353184,8.7190790415789,9.22787751400785,9.31104283224465,13.29541287935,8.16146342563582,1.48340241608408,8.88528580148834,4.33412422722767,5.00025223898222,6.78126445216888,5.33107488111998,8.92234875505438,9.00885678967433,11.1961161858926,11.0559979043539,6.68269432610579,4.4287039101359,3.45643094115643,3.348165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|phase1_expression=3.52327463630547,6.97950815278722,9.09998478779072,13.0059610861937,11.520601788766,9.9048770428015,11.6806320297763,20.2723617803275,27.1722233752717,27.3855495796732,13.0125655851384,15.9544317990673,25.6801094896809,29.8103572248781,7.99463428357591,7.08663435864391,2.09868563438444,15.6153771852328,18.2362196695633,11.4585205985468,28.4044589104573,13.8014422169231,9.66439219814061,6.07971206614945,7.79991555628378,9.18771142584032,8.18447792702242,5.60225204983311,10.4512880701006,11.8454160987167,8.64748991555688,4.44521471421742,4.92051830067656,15.8481681015439,8.08784535303569,8.31173226792462,8.77928231928187,13.393012183581,15.626706890476,12.0410461113974,12.9410927366823,12.9778642142105,13.1087795318411,3.14742044938943,3.34543873024398,3.48738829107195,5.47673941043627,3.05235218932625,4.39372365468944,4.08302788055995,2.37976916763116,4.31257693094915,18.6238692724087,29.7398478224651,29.5762543245368,1.80081605225163,6.30373567865265,1.03134418455488,5.66486090406874,7.40587370980846,3.1691570175309,4.40497891689872,3.55717918444456,13.0485459005803,17.7995945262055,13.4991221839759,7.49000276296012,8.06858441175265,22.7080250955566,24.8410926530311,23.7667206327062,3.42781181284564,1.98781686856452,13.4739879136449,11.0222291670972,12.8690630125403,2.20231761998777,2.29837208553338,2.4577045320999,4.74790635828698,4.48289453651807,7.29278718779464,3.35019598801657,2.8138130501584,2.59757021220577,5.59794312399969,3.55929201997757,3.72798891650601,4.69502398665741,4.38315048619356,11.5945795480671,10.3250865237766,10.879541339324,17.2705021324101,13.6453047664011,8.06448396775204,11.6568868709354,2.55645483867087,1.81850203222008,1.06001872353102,2.67602497575693,1.28326477414318,0,0,3.030874574157,3.54703811665138,6.0662933401774,11.5325718516251,5.43769555659061,6.23456984072264,3.12273588179045,3.04465478312141,5.07354093963329,4.37095657602605,5.99702406392095,8.41966161908826,10.1349936771093,7.80836527367523,11.4999371753484,4.69123864847487,5.96272099843063,5.81850303762267,5.59175283654366,2.63502717310392,1.8850203613211,7.91916871146633,23.4837644031604,16.7972764678154,15.1213570216947,2.24685959107234,1.37250180845588,9.42407640846483,2.43354048269187,3.06858548796397,2.90903262383384,2.59586020908412,1.93494791315601,8.9573018839267,5.81262344397452,17.8875577503503,1.82168620147785,2.75882525320168,3.42118046630164,2.56198190320716,4.62648194229029,3.97152532883034,3.93547243150861,6.46758426847539,2.37124792226126,2.45837904218165,2.46331573829528,2.41115305670332,3.33656699070717,5.2237824978325,4.7329891373827,2.9855140022774,11.937624184325,10.0365683774739,16.1973194655488,2.27838349789052,2.81431271977315,3.06105504483725,3.78791576936336,4.32881309844288,2.00547246753592,3.25547522650571,4.29237442239391,5.25444040652263,4.93679549740441,4.76085645829376,6.16122952548504,3.65499968563331,6.58650345873152,5.36825675041487,3.99550902271842,30.1510514271303,8.59088835757875,7.1401652999157,2.13288250535234,1.39342003116263,6.95884291139304,7.86565746031036,9.56225588532942,5.32631753115166,8.54152310780121,6.58795818896044,7.54005626400809,5.76973768919337,8.57841983324129,8.08937467788799,5.83572734661674,7.96565093017469,1.89667900953082,1.82797620175566,3.38123207019241,4.48032921259691,5.04276466635827,5.89140887078676,7.90456714053216,7.38050739898011,10.6759134932135,9.74837594982224,11.5616524563988,6.67380422864376,7.86235980452812,5.39669069723649,6.49152388443209,8.20002343158217,7.12952384987975,7.76779571117189,6.64754429777645,6.58947391651396,7.18841032636773,7.81495990103857,9.67316786655138,13.8918382870911,15.4281775628844,14.473305640901,6.46636165583116,2.4633883530163,2.77040459951444,3.56464680127895,3.75504397261603,3.85264392116176,2.38043640886014,6.04914308359176,4.09851374676097,2.43611158613652,7.01600982092943,5.40748938561935,5.87128938344045,4.91806799177139,21.1107797514981,10.3342079925555,34.4234991113325,27.869611376778,1.9266070798535,1.99259867206745,3.11476396215683,5.80683132570058,2.83957397474631,3.12350995437311,2.58508077279359,3.82350076724083,3.7875774594007,3.96307143104365,4.85772842009873,2.04579100537918,5.53402889125133,1.60660658210904,10.6455063906201,2.13678724400706,3.90928702448583,6.43383479592888,10.619611067197,4.61283208694465,3.32555912661226,3.58349651536206,6.20133975049623,6.14870295887855,7.23599220871019,7.99774204850512,4.63446591900138,4.42451461110142,5.27093042874994,2.06271086496374,5.7874732978144,1.62054984628179,1.29358683782755,2.14337035031592,2.12808280370728,0.891844088010353,1.64549020602121,2.13125464380219,4.22409074514679,3.1774810629573,5.51320995137405,13.1909002353184,8.7190790415789,9.22787751400785,9.31104283224465,13.29541287935,8.16146342563582,1.48340241608408,8.88528580148834,4.33412422722767,5.00025223898222,6.78126445216888,5.33107488111998,8.92234875505438,9.00885678967433,11.1961161858926,11.0559979043539,6.68269432610579,4.4287039101359,3.45643094115643,3.348165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| ||
|short_description=p2@Znrf2 | |short_description=p2@Znrf2 | ||
}} | }} |
Latest revision as of 14:02, 1 October 2015
Short description: | p2@Znrf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Znrf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -173bp_to_ENSMUST00000079869, NM_199143, uc009cae.2_5end |
EntrezGene: | Znrf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.34e-10 | 32 |
hematopoietic oligopotent progenitor cell | 6.34e-10 | 32 |
hematopoietic stem cell | 6.34e-10 | 32 |
hematopoietic multipotent progenitor cell | 6.34e-10 | 32 |
connective tissue cell | 1.44e-09 | 46 |
mesenchymal cell | 1.44e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 3.01e-08 | 25 |
lymphoid lineage restricted progenitor cell | 6.47e-08 | 12 |
leukocyte | 2.21e-07 | 17 |
nongranular leukocyte | 2.21e-07 | 17 |
T cell | 2.40e-07 | 11 |
pro-T cell | 2.40e-07 | 11 |
motile cell | 8.57e-07 | 54 |
mature alpha-beta T cell | 8.65e-07 | 9 |
alpha-beta T cell | 8.65e-07 | 9 |
immature T cell | 8.65e-07 | 9 |
mature T cell | 8.65e-07 | 9 |
immature alpha-beta T cell | 8.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gut epithelium | 1.72e-12 | 55 |
hematopoietic system | 4.34e-10 | 45 |
blood island | 4.34e-10 | 45 |
hemolymphoid system | 6.60e-10 | 48 |
immune system | 6.60e-10 | 48 |
connective tissue | 1.44e-09 | 46 |
unilaminar epithelium | 1.72e-09 | 66 |
digestive system | 4.52e-08 | 116 |
digestive tract | 4.52e-08 | 116 |
primitive gut | 4.52e-08 | 116 |
endo-epithelium | 4.53e-08 | 69 |
subdivision of digestive tract | 6.12e-08 | 114 |
endoderm-derived structure | 1.38e-07 | 118 |
endoderm | 1.38e-07 | 118 |
presumptive endoderm | 1.38e-07 | 118 |
pharynx | 6.68e-07 | 24 |
upper respiratory tract | 6.68e-07 | 24 |
chordate pharynx | 6.68e-07 | 24 |
pharyngeal arch system | 6.68e-07 | 24 |
pharyngeal region of foregut | 6.68e-07 | 24 |
gland of gut | 7.55e-07 | 24 |
thymus | 8.10e-07 | 23 |
neck | 8.10e-07 | 23 |
respiratory system epithelium | 8.10e-07 | 23 |
hemolymphoid system gland | 8.10e-07 | 23 |
pharyngeal epithelium | 8.10e-07 | 23 |
thymic region | 8.10e-07 | 23 |
pharyngeal gland | 8.10e-07 | 23 |
entire pharyngeal arch endoderm | 8.10e-07 | 23 |
thymus primordium | 8.10e-07 | 23 |
early pharyngeal endoderm | 8.10e-07 | 23 |