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FFCP PHASE1:Mm9::chr15:99532709..99532743,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=83797
|EntrezGene=83797
|HGNC=
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=Q61466,Q68FH8
|UniProt=Q61466,Q68FH8
|association_with_transcript=0bp_to_ENSMUST00000023759,NM_031842,uc007xqb.1_5end
|association_with_transcript=0bp_to_ENSMUST00000023759,NM_031842,uc007xqb.1_5end
|cluster_id=chr15:99532709..99532743,+
|description=CAGE_peak_1_at_Smarcd1_5end
|description=CAGE_peak_1_at_Smarcd1_5end
|id=chr15:99532709..99532743,+
|id=chr15:99532709..99532743,+
|ontology_enrichment_celltype=CL:0000221!9.59e-15!44;CL:0000133!9.59e-15!44;CL:0000540!1.44e-14!33;CL:0000047!1.44e-14!33;CL:0000031!1.44e-14!33;CL:0000404!1.44e-14!33;CL:0002319!2.47e-14!43;CL:0000117!2.94e-10!23;CL:0000337!2.94e-10!23;CL:0000393!1.99e-09!39;CL:0000211!1.99e-09!39;CL:0000055!4.29e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000221,9.59e-15,44;CL:0000133,9.59e-15,44;CL:0000540,1.44e-14,33;CL:0000047,1.44e-14,33;CL:0000031,1.44e-14,33;CL:0000404,1.44e-14,33;CL:0002319,2.47e-14,43;CL:0000117,2.94e-10,23;CL:0000337,2.94e-10,23;CL:0000393,1.99e-09,39;CL:0000211,1.99e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.73e-21!73;UBERON:0005743!3.73e-21!73;UBERON:0000073!8.77e-21!75;UBERON:0001016!8.77e-21!75;UBERON:0004121!3.30e-18!102;UBERON:0000924!3.30e-18!102;UBERON:0006601!3.30e-18!102;UBERON:0002346!8.28e-17!71;UBERON:0003075!8.28e-17!71;UBERON:0007284!8.28e-17!71;UBERON:0000153!6.34e-16!94;UBERON:0007811!4.74e-15!86;UBERON:0000033!3.54e-14!63;UBERON:0003056!5.04e-14!49;UBERON:0001049!1.71e-13!52;UBERON:0005068!1.71e-13!52;UBERON:0006241!1.71e-13!52;UBERON:0007135!1.71e-13!52;UBERON:0002020!2.72e-12!34;UBERON:0000955!8.22e-12!50;UBERON:0006238!8.22e-12!50;UBERON:0002616!2.75e-11!49;UBERON:0003080!4.08e-11!40;UBERON:0002780!4.26e-11!39;UBERON:0001890!4.26e-11!39;UBERON:0006240!4.26e-11!39;UBERON:0002791!9.01e-10!29;UBERON:0003528!9.01e-10!29;UBERON:0001893!9.01e-10!29;UBERON:0000956!1.23e-07!21;UBERON:0001869!1.23e-07!21;UBERON:0000203!1.23e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.73e-21,73;UBERON:0001016,8.77e-21,75;UBERON:0004121,7.01e-19,95;UBERON:0000924,7.01e-19,95;UBERON:0006601,7.01e-19,95;UBERON:0002346,5.85e-18,64;UBERON:0003075,5.85e-18,64;UBERON:0007284,5.85e-18,64;UBERON:0010371,6.08e-15,73;UBERON:0003056,5.04e-14,49;UBERON:0000073,9.64e-14,54;UBERON:0001049,1.71e-13,52;UBERON:0005068,1.71e-13,52;UBERON:0006241,1.71e-13,52;UBERON:0007135,1.71e-13,52;UBERON:0010314,9.59e-13,92;UBERON:0002020,2.72e-12,34;UBERON:0000955,1.01e-11,47;UBERON:0006238,1.01e-11,47;UBERON:0002616,3.43e-11,46;UBERON:0003080,4.08e-11,40;UBERON:0002780,4.26e-11,39;UBERON:0001890,4.26e-11,39;UBERON:0006240,4.26e-11,39;UBERON:0003528,9.01e-10,29;UBERON:0002791,9.01e-10,29;UBERON:0001893,9.01e-10,29;UBERON:0000956,1.23e-07,21;UBERON:0001869,1.23e-07,21;UBERON:0000203,1.23e-07,21
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0.7012395361542,22.0330895276475,16.7270636811575,11.1364907510551,11.4634694427098,19.7541759183553,7.0674104335688,7.38805347763219,11.1841076355647,64.8246879486819,55.0220889441842,51.4575905321574,35.1956650902726,27.8985218711899,33.7912250981556,54.8058304475671,43.0976513833475,38.3785200598102,47.8336559235492,46.6608610137742,34.7612232690996,31.4224083699755,30.5051542779537,27.6731352942703,30.6135649591393,34.5705557319401,34.1355076636711,40.4669304458342,35.1363245819554,46.7909792861699,40.6329526101467,42.0043465988333,32.5196024744314,44.0625921224515,4.0811469050738,27.7482441717581,28.5290064018133,17.6278847182282,8.113962949352,6.19352168988901,11.3554007045704,8.36036678408357,6.01886524842436,58.1694397895579,47.4134993602392,42.3942679945154,52.0715142501373,34.2541259885321,42.3020582538232,34.4261475118221,36.4760174611619,25.8291173120997,38.3142630696347,106.900968011702,80.2039995536072,52.2444833607651,36.4660075602441,41.5034062003405,32.9079880125525,22.6691662357648,25.9604172121007,25.0316983481616,25.2697211763797,27.6292436880361,23.5782926732595,23.5976598824104,24.7137088282795,25.0418644646474,28.1013277857013,25.0310144040888,29.1292922900195,28.8460130562315,30.1757786275515,26.0580631812916,23.4268064130325,28.3739066037312,27.0344334936131,29.3621266895831,28.0920498200366,27.0733399851703,27.8853894124113,24.9879569476386,28.0571135828869,27.5233242048084,24.6261205938909,30.283097194557,29.5929366665195,22.5700734847935,47.7138203861477,19.6502551094143,33.3050133774862,29.0758264744642,11.6913452133343,12.0571274522619
|phase1_expression=47.5642075901238,7.32848356042658,8.64498554840118,4.53696316960245,4.00716583957078,11.2479112180966,9.57811826441655,12.7832090207161,15.7683368809867,14.0438715793196,10.2730780935303,10.0512920334124,11.1280474455284,10.2281870830227,6.66219523631325,4.45445588257617,4.19737126876888,14.8267217718372,10.6949258212476,7.63901373236454,21.4309091180696,30.4823220186718,22.9855814442263,6.07971206614945,5.27641346454491,5.7423196411502,6.03066794622705,3.23206849028834,4.18051522804023,4.78857246543868,7.53883736228036,8.25539875497521,6.76571266343027,31.6963362030877,5.19932915552294,4.48833542467929,4.69589519403449,0.837063261473815,1.5626706890476,1.57057123192139,0,2.73218193983378,0.971020706062307,7.93149953246137,8.00877756634165,13.0318194034794,42.2491325947941,39.4625533048608,27.6804590245434,23.7204476870626,20.4380175573029,47.4383462404406,15.4359997573117,15.2326049822382,18.821252751978,3.34437266846731,7.16333599846892,2.57836046138721,143.037737827736,114.791042502031,117.258809648643,13.8926258148344,11.5608323494448,3.5995988691256,5.93319817540185,4.9733608046227,31.4580116044325,38.0376122268339,117.687709970122,119.075237608551,109.999954786773,61.4149616468178,54.7753981560002,125.063105998468,159.103481890272,140.640474351333,40.7428759697738,28.3465890549117,22.8873734551803,144.943030215483,136.408076611193,118.768248486941,21.217907924105,24.1987922313622,25.0589126353969,59.8096028511545,58.5147608084313,107.552480241198,17.4170244666323,27.3569047586564,13.3337664802772,1.72084775396277,2.719885334831,1.61910957491345,3.89865850468601,0.896053774194671,6.17955448579708,7.32850387085648,6.23486411046885,10.6001872353102,49.5768837613915,23.0987659345772,40.7688383530633,71.1066703153331,9.74209684550464,9.37431502257865,10.6160133453104,8.10705546005326,5.69663344023778,16.92240385339,40.5955664632758,20.7036525252256,22.1390877365816,15.8258772580254,31.3961848052332,14.4516580029127,9.64060374164058,5.06097749219691,4.42305275974937,15.0443170451091,9.49618529379692,13.091631834651,1.86391761218122,19.6163133997737,26.8091784721222,5.62005521458901,25.7602517687729,11.3981518888747,17.4086211090099,29.2091746839404,50.3250663100489,132.942304535411,41.7178368461464,48.0745059781021,33.2460871295296,38.126696820923,41.1431029955278,11.0722203842983,7.07623723614289,11.3638602178696,81.8457586235406,59.5446450482695,70.5843548836969,53.952324785186,86.8826094162457,72.8967068420795,69.2455744496396,23.2833033665114,104.334908579496,56.3536118900101,64.2221603198413,39.8936233018186,32.531528159395,22.6363908239408,13.3758388665163,45.9769156350719,18.2575428701441,12.3526995415063,13.0715209721973,31.8973689704673,29.7848096175992,24.668502420159,26.988899856714,29.1211062986158,17.5864508691611,23.0208605302904,14.2184902741798,32.5775305204403,23.0383789878873,17.7300861205423,17.2676564332673,12.8655988934292,10.5384055339704,14.6284996448805,35.9595812044658,91.6880096299424,2.97376904685418,3.70230793328962,58.2276923961189,44.5894409972042,27.3199018002838,21.3784536100743,15.3440850252961,11.4135375667535,4.2707615539006,15.9757986082291,15.0801125280162,20.0946036761562,16.3769833180061,8.98819408654222,3.45820879799511,5.77509692437665,60.8833962059392,51.6403276995974,64.2434093336558,40.7302655690629,39.372354895028,48.7443948237714,27.6976032604247,11.6612016903886,10.3619160375307,12.9567022117891,1.77871576252289,15.6834399373128,12.1866576970186,5.17182858485164,8.72298521970563,6.51178331331525,4.07401362850272,7.19240343627027,10.5387897403773,6.86403532970204,2.87536413054709,11.5363693777236,5.61667811606209,4.2938409251009,1.97337154874103,6.27176577772377,9.42241269849684,48.1308185897031,52.8006523672164,43.6244870442234,33.5607055052558,26.8010011906905,22.6141458841713,27.5138443479496,32.3152045417692,38.9777853781844,34.9205943359897,11.6342953448174,15.5416483679306,14.6095549167327,9.04747703635634,3.26343410291226,2.45882136509518,7.17435540392304,22.6376331882787,32.7020605592247,13.2787305755107,9.08895337935743,52.3743644230986,47.2430880598933,73.6748020246172,48.2716971864155,56.3680645428457,55.7660765654,48.5772842009873,50.2680075607456,64.0366200273368,79.6876864726081,22.4265334629064,34.3666615077803,44.7939138222334,17.1568927891437,6.63725691699814,35.6887535147823,25.3951787850391,12.8251454234011,16.2416041084425,11.0676653259814,18.3484088149437,18.9037539328303,16.3988794056972,7.9009189483954,9.48767477174989,7.21948802737308,14.2984634416591,55.8189391497062,52.5196256157983,38.7950033407182,31.9212420556092,31.2145430803623,27.9733335023606,47.4965320618775,17.6003781047783,8.47328283455281,5.51320995137405,7.25499512942512,22.4435553107309,14.3544761329011,14.8021706563889,11.1615811826642,7.28702091574627,23.3635880533242,5.80960994712699,35.4985412896743,14.8155621895769,10.5486335922627,7.65487675237741,5.94823250336959,48.6138309782426,43.9447560296286,46.8497911196997,8.59203556213602,71.6501025461272,30.7012395361542,22.0330895276475,16.7270636811575,11.1364907510551,11.4634694427098,19.7541759183553,7.0674104335688,7.38805347763219,11.1841076355647,64.8246879486819,55.0220889441842,51.4575905321574,35.1956650902726,27.8985218711899,33.7912250981556,54.8058304475671,43.0976513833475,38.3785200598102,47.8336559235492,46.6608610137742,34.7612232690996,31.4224083699755,30.5051542779537,27.6731352942703,30.6135649591393,34.5705557319401,34.1355076636711,40.4669304458342,35.1363245819554,46.7909792861699,40.6329526101467,42.0043465988333,32.5196024744314,44.0625921224515,4.0811469050738,27.7482441717581,28.5290064018133,17.6278847182282,8.113962949352,6.19352168988901,11.3554007045704,8.36036678408357,6.01886524842436,58.1694397895579,47.4134993602392,42.3942679945154,52.0715142501373,34.2541259885321,42.3020582538232,34.4261475118221,36.4760174611619,25.8291173120997,38.3142630696347,106.900968011702,80.2039995536072,52.2444833607651,36.4660075602441,41.5034062003405,32.9079880125525,22.6691662357648,25.9604172121007,25.0316983481616,25.2697211763797,27.6292436880361,23.5782926732595,23.5976598824104,24.7137088282795,25.0418644646474,28.1013277857013,25.0310144040888,29.1292922900195,28.8460130562315,30.1757786275515,26.0580631812916,23.4268064130325,28.3739066037312,27.0344334936131,29.3621266895831,28.0920498200366,27.0733399851703,27.8853894124113,24.9879569476386,28.0571135828869,27.5233242048084,24.6261205938909,30.283097194557,29.5929366665195,22.5700734847935,47.7138203861477,19.6502551094143,33.3050133774862,29.0758264744642,11.6913452133343,12.0571274522619
|short_description=p1@Smarcd1
|short_description=p1@Smarcd1
}}
}}

Latest revision as of 14:05, 1 October 2015

Short description:p1@Smarcd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smarcd1_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: 0bp_to_ENSMUST00000023759, NM_031842, uc007xqb.1_5end
EntrezGene:Smarcd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smarcd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G747.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.05
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.13
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H230.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.03
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B742.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.46
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.68
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C447.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.82
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C3143.04
Mouse Granule cells, donor2.CNhs12357.11731-123E3114.79
Mouse Granule cells, donor3.CNhs12108.11636-122C7117.26
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.89
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C831.46
Mouse Microglia, donor2.CNhs12634.11736-123E838.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5117.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5119.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9110.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F161.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D554.78
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2125.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2159.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6140.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4144.94
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4136.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8118.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D659.81
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F658.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1107.55
Mouse Schwann, donor1.CNhs12507.11728-123D917.42
Mouse Schwann, donor2.CNhs12573.11746-123F927.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G649.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.11
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D716.92
adrenal gland, embryo E14.CNhs11038.406-44C540.60
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I122.14
adrenal gland, embryo E18.CNhs11026.1262-18F515.83
adrenal gland, neonate N00.CNhs11191.1311-23C131.40
adrenal gland, neonate N25.CNhs11223.1377-27I314.45
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F515.04
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.41
corpora quadrigemina, adult.CNhs10501.16-22A429.21
corpus striatum, adult.CNhs10487.19-21D850.33
corpus striatum, neonate N00.CNhs11226.630-43F1132.94
cortex, adult.CNhs10473.12-14D541.72
cortex, neonate N30.CNhs11107.1392-42F248.07
diencephalon, adult.CNhs10482.20-12F233.25
diencephalon, neonate N30.CNhs11201.1388-42B238.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B141.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.07
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C681.85
eyeball, embryo E14.CNhs10521.399-16E259.54
eyeball, embryo E15.CNhs10593.426-16C970.58
eyeball, embryo E17.CNhs11023.1261-18D453.95
eyeball, neonate N00.CNhs11207.633-15C686.88
eyeball, neonate N01.CNhs11140.1532-43E772.90
eyeball, neonate N02.CNhs11205.1551-44G869.25
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E2104.33
forelimb, embryo E12.CNhs10600.359-14H256.35
forelimb, embryo E13.CNhs10589.384-1E264.22
forelimb, embryo E14.CNhs10577.413-26A839.89
forelimb, embryo E15.CNhs11007.437-20E732.53
forelimb, embryo E17.CNhs10598.1517-43C422.64
forelimb, embryo E18.CNhs11008.1520-43B513.38
gonad, embryo E13.CNhs11044.1564-45I645.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E931.90
heart, embryo E12.CNhs11015.353-12F529.78
heart, embryo E13.CNhs11013.376-3I924.67
heart, embryo E14.CNhs10597.403-26D426.99
heart, embryo E15.CNhs11017.431-16C829.12
heart, embryo E16.CNhs11021.457-17C617.59
heart, embryo E17.CNhs11025.479-18E523.02
heart, embryo E18.CNhs11030.1283-20G314.22
heart, neonate N00.CNhs11213.639-21E332.58
heart, neonate N03.CNhs11221.1349-25I223.04
heart, neonate N10.CNhs11118.749-24G117.73
heart, neonate N16.CNhs11209.782-15G117.27
heart, neonate N20.CNhs11127.821-26I612.87
heart, neonate N25.CNhs11196.1351-25D310.54
heart, neonate N30.CNhs11202.1390-42D214.63
hippocampus, adult.CNhs10478.13-16E835.96
hippocampus, neonate N00.CNhs11228.627-43G191.69
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I558.23
intestine, embryo E13.CNhs11010.381-16D544.59
intestine, embryo E15.CNhs10602.976-16D827.32
intestine, embryo E16.CNhs10585.463-22H421.38
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E915.98
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F220.09
intestine, neonate N10.CNhs11098.755-23A516.38
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I960.88
kidney, embryo E15.CNhs10997.434-16F851.64
kidney, embryo E16.CNhs10584.464-22A564.24
kidney, embryo E17.CNhs11028.483-18I240.73
kidney, embryo E18.CNhs11001.1288-20C739.37
kidney, neonate N00.CNhs11214.646-21G748.74
kidney, neonate N10.CNhs11206.758-6D527.70
kidney, neonate N20.CNhs11113.832-19I111.66
kidney, neonate N25.CNhs11122.1353-25F310.36
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F815.68
liver, embryo E13.CNhs10524.378-3H612.19
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F410.54
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B19.42
lung, embryo E12.CNhs10522.354-16G248.13
lung, embryo E14.CNhs10604.404-26F852.80
lung, embryo E15.CNhs11020.432-17C543.62
lung, embryo E16.CNhs10998.458-17B633.56
lung, embryo E17.CNhs10605.480-44A626.80
lung, embryo E18.CNhs10583.1287-20I622.61
lung, neonate N00.CNhs11224.640-42C627.51
lung, neonate N06.CNhs11212.683-20E532.32
lung, neonate N07.CNhs11111.715-19A338.98
lung, neonate N10.CNhs11219.750-23E634.92
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C715.54
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C222.64
medulla oblongata, neonate N30.CNhs11200.1396-42A332.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E152.37
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E247.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E373.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.27
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D856.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D955.77
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D448.58
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D550.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D664.04
olfactory brain, adult.CNhs10489.18-22I979.69
ovary, adult.CNhs10507.91-2I722.43
ovary, embryo E18.CNhs11040.505-44H734.37
ovary, neonate N00.CNhs11217.1299-22I444.79
oviduct, adult pregnant day01.CNhs10500.988-6G617.16
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F435.69
pancreas, embryo E15.CNhs11042.1556-45F225.40
pancreas, embryo E16.CNhs11003.460-26E512.83
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E655.82
pituitary gland, embryo E13.CNhs11009.370-44C752.52
pituitary gland, embryo E14.CNhs11037.398-44A538.80
pituitary gland, embryo E15.CNhs10592.427-16B931.92
pituitary gland, embryo E16.CNhs11036.449-43F631.21
pituitary gland, embryo E17.CNhs11039.1265-44F527.97
pituitary gland, neonate N00.CNhs11190.1308-22E947.50
placenta, adult pregnant day10.CNhs10472.539-13I717.60
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G422.44
skin, neonate N03.CNhs11215.662-22H314.35
skin, neonate N06.CNhs11097.693-20I514.80
skin, neonate N10.CNhs11108.762-6C411.16
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C923.36
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C135.50
spleen, embryo E18.CNhs11011.1271-21F214.82
spleen, neonate N10.CNhs11116.752-24D110.55
spleen, neonate N20.CNhs11112.824-19H17.65
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C648.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D346.85
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E371.65
stomach, embryo E15.CNhs10603.1252-16G830.70
stomach, embryo E16.CNhs11022.459-17D422.03
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C611.14
stomach, neonate N03.CNhs11193.1340-24B811.46
stomach, neonate N07.CNhs11210.718-18A919.75
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G564.82
testis, embryo E13.CNhs11031.389-23F555.02
testis, embryo E15.CNhs11034.443-27C551.46
testis, embryo E16.CNhs11033.470-26G535.20
testis, embryo E17.CNhs11029.486-18I527.90
testis, embryo E18.CNhs11027.503-18G533.79
testis, neonate N00.CNhs11189.1300-22B754.81
testis, neonate N07.CNhs11222.726-26I443.10
testis, neonate N10.CNhs11204.763-44D938.38
testis, neonate N20.CNhs11110.839-18H347.83
testis, neonate N30.CNhs11130.1391-42E246.66
thymus, adult.CNhs10471.38-12B534.76
thymus, embryo E14.CNhs11041.402-44I431.42
thymus, embryo E15.CNhs11005.430-45I230.51
thymus, embryo E16.CNhs11002.456-26C527.67
thymus, embryo E17.CNhs10581.478-18C130.61
thymus, embryo E18.CNhs10595.1273-19G434.57
thymus, neonate N02.CNhs11181.1541-43F834.14
thymus, neonate N03.CNhs11137.2104-43C740.47
thymus, neonate N06.CNhs11197.681-26C435.14
thymus, neonate N07.CNhs11211.713-19D346.79
thymus, neonate N10.CNhs11194.748-24E440.63
thymus, neonate N20.CNhs11186.820-7A242.00
thymus, neonate N25.CNhs11125.1362-25G732.52
thymus, neonate N30.CNhs11132.1393-42G244.06
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H327.75
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.63
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F56.19
uterus, adult.CNhs10509.92-27E511.36
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A247.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.07
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A634.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.48
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I8106.90
whole body, embryo E12.CNhs10587.857-27C980.20
whole body, embryo E13.CNhs10512.372-23H252.24
whole body, embryo E14.5.CNhs10578.420-27D236.47
whole body, embryo E14.CNhs10519.395-14B141.50
whole body, embryo E16.CNhs10514.453-14F232.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.37
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G528.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G528.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G530.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.59
whole body, embryo E17.5.CNhs10513.490-9F922.57
whole body, embryo E17.CNhs10517.475-3I547.71
whole body, embryo E18.CNhs10516.493-3B319.65
whole body, neonate N00.CNhs10525.657-19C233.31
whole body, neonate N01.CNhs10576.659-23C629.08
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B412.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.59e-1544
neurectodermal cell9.59e-1544
neuron1.44e-1433
neuronal stem cell1.44e-1433
neuroblast1.44e-1433
electrically signaling cell1.44e-1433
neural cell2.47e-1443
CNS neuron (sensu Vertebrata)2.94e-1023
neuroblast (sensu Vertebrata)2.94e-1023
electrically responsive cell1.99e-0939
electrically active cell1.99e-0939

Uber anatomy
Ontology termp-valuen
central nervous system3.73e-2173
nervous system8.77e-2175
ectoderm-derived structure7.01e-1995
ectoderm7.01e-1995
presumptive ectoderm7.01e-1995
neurectoderm5.85e-1864
neural plate5.85e-1864
presumptive neural plate5.85e-1864
ecto-epithelium6.08e-1573
pre-chordal neural plate5.04e-1449
regional part of nervous system9.64e-1454
neural tube1.71e-1352
neural rod1.71e-1352
future spinal cord1.71e-1352
neural keel1.71e-1352
structure with developmental contribution from neural crest9.59e-1392
gray matter2.72e-1234
brain1.01e-1147
future brain1.01e-1147
regional part of brain3.43e-1146
anterior neural tube4.08e-1140
regional part of forebrain4.26e-1139
forebrain4.26e-1139
future forebrain4.26e-1139
brain grey matter9.01e-1029
regional part of telencephalon9.01e-1029
telencephalon9.01e-1029
cerebral cortex1.23e-0721
cerebral hemisphere1.23e-0721
pallium1.23e-0721
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