Personal tools

FFCP PHASE1:Mm9::chr1:74421717..74421746,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=18173|HGNC=|MCL_coexpression_id=116|UniProt=P41251|association_with_transcript=-30bp_to_ENSMUST00000027368,ENSMUST00000147233,NM_013612,uc007bly.2_5end|description=CAGE_peak_5_at_Slc11a1_5end|id=chr1:74421717..74421746,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000839,4.49e-17,13;CL:0000763,1.37e-13,16;CL:0002194,5.52e-13,4;CL:0000766,5.52e-13,4;CL:0000234,5.52e-13,4;CL:0000576,5.52e-13,4;CL:0000235,5.52e-13,4;CL:0000864,5.52e-13,4;CL:0002009,5.52e-13,4;CL:0000040,5.52e-13,4;CL:0000559,5.52e-13,4;CL:0000553,1.40e-11,6;CL:0000556,1.40e-11,6;CL:0000049,3.32e-11,19;CL:0002092,6.16e-11,3;CL:0002540,6.16e-11,3;CL:0002031,3.72e-08,25;CL:0000050,1.20e-07,9;CL:0002476,1.66e-07,2;CL:0000473,1.98e-07,7;CL:0000557,1.98e-07,7;CL:0002320,2.64e-07,46;CL:0000134,2.64e-07,46;CL:0000878,4.17e-07,2;CL:0000129,4.17e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.27e-10,3;DOID:4045,4.27e-10,3|ontology_enrichment_uberon=UBERON:0002405!7.52e-11!70;UBERON:0002371!4.62e-08!16;UBERON:0000926!6.53e-07!193;UBERON:0004120!6.53e-07!193;UBERON:0006603!6.53e-07!193;UBERON:0005172!6.91e-07!49;UBERON:0005173!6.91e-07!49;UBERON:0002417!6.91e-07!49;UBERON:0000916!6.91e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-25,16;UBERON:0002204,1.03e-18,32;UBERON:0001474,7.25e-18,22;UBERON:0004765,7.25e-18,22;UBERON:0001434,7.25e-18,22;UBERON:0002390,2.31e-12,45;UBERON:0003061,2.31e-12,45;UBERON:0002193,2.15e-11,48;UBERON:0002405,2.15e-11,48;UBERON:0002384,2.64e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,1.39912375625629,1.41957974411207,1.09691546884591,1.27316895539409,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,2.3440060335714,4.18818995179039,12.9410927366823,10.9287277593351,9.71020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,15.2982951937838,12.8552627133707,13.4991221839759,2.69640099466564,1.53687322128622,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,7.11066703153331,0,0,0,0.34255163915718,0.517875767294343,0.593768556259299,0.173485326766136,0,0.461230994512117,0.452167921657868,0.352766121407114,0.376999773989026,0.247194967734374,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0.360124259610698,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.658239399653922,0.164167464079095,0.0810688095458557,0.146199987425332,1.3173006917463,0.402619256281115,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0.592905254174298,0.333690211432188,0.589676985339609,0.449724224769707,1.01430060694251,1.20588579876208,1.52775511068852,0.863088412352432,0.810676133875177,0.823684239564244,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.717589654087649,1.4473305640901,0,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,6.03165135757089,9.79030230873677,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0,0,0,0.516856586336442,0,1.06949213515416,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,0.18542530201051,1.53783792718067,0.206386867963223,0.925972636848558,0.565105371014073,0.410082683163076,1.83022538565218,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,0.563047426353546,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.376437521661322,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0.220591419119515,0|short_description=p5@Slc11a1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18173
|HGNC=
|MCL_coexpression_id=116
|TSSclassifier=NA
|UniProt=P41251
|association_with_transcript=-30bp_to_ENSMUST00000027368,ENSMUST00000147233,NM_013612,uc007bly.2_5end
|cluster_id=chr1:74421717..74421746,+
|description=CAGE_peak_5_at_Slc11a1_5end
|id=chr1:74421717..74421746,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000839,4.49e-17,13;CL:0000763,1.37e-13,16;CL:0002194,5.52e-13,4;CL:0000766,5.52e-13,4;CL:0000234,5.52e-13,4;CL:0000576,5.52e-13,4;CL:0000235,5.52e-13,4;CL:0000864,5.52e-13,4;CL:0002009,5.52e-13,4;CL:0000040,5.52e-13,4;CL:0000559,5.52e-13,4;CL:0000553,1.40e-11,6;CL:0000556,1.40e-11,6;CL:0000049,3.32e-11,19;CL:0002092,6.16e-11,3;CL:0002540,6.16e-11,3;CL:0002031,3.72e-08,25;CL:0000050,1.20e-07,9;CL:0002476,1.66e-07,2;CL:0000473,1.98e-07,7;CL:0000557,1.98e-07,7;CL:0002320,2.64e-07,46;CL:0000134,2.64e-07,46;CL:0000878,4.17e-07,2;CL:0000129,4.17e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,4.27e-10,3;DOID:4045,4.27e-10,3
|ontology_enrichment_uberon=UBERON:0002405!7.52e-11!70;UBERON:0002371!4.62e-08!16;UBERON:0000926!6.53e-07!193;UBERON:0004120!6.53e-07!193;UBERON:0006603!6.53e-07!193;UBERON:0005172!6.91e-07!49;UBERON:0005173!6.91e-07!49;UBERON:0002417!6.91e-07!49;UBERON:0000916!6.91e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-25,16;UBERON:0002204,1.03e-18,32;UBERON:0001474,7.25e-18,22;UBERON:0004765,7.25e-18,22;UBERON:0001434,7.25e-18,22;UBERON:0002390,2.31e-12,45;UBERON:0003061,2.31e-12,45;UBERON:0002193,2.15e-11,48;UBERON:0002405,2.15e-11,48;UBERON:0002384,2.64e-07,46
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,1.39912375625629,1.41957974411207,1.09691546884591,1.27316895539409,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,2.3440060335714,4.18818995179039,12.9410927366823,10.9287277593351,9.71020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,15.2982951937838,12.8552627133707,13.4991221839759,2.69640099466564,1.53687322128622,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,7.11066703153331,0,0,0,0.34255163915718,0.517875767294343,0.593768556259299,0.173485326766136,0,0.461230994512117,0.452167921657868,0.352766121407114,0.376999773989026,0.247194967734374,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,0.585561594023094,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0.360124259610698,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.658239399653922,0.164167464079095,0.0810688095458557,0.146199987425332,1.3173006917463,0.402619256281115,0,0.102904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0.592905254174298,0.333690211432188,0.589676985339609,0.449724224769707,1.01430060694251,1.20588579876208,1.52775511068852,0.863088412352432,0.810676133875177,0.823684239564244,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0.717589654087649,1.4473305640901,0,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,6.03165135757089,9.79030230873677,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0,0,0,0.516856586336442,0,1.06949213515416,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0,0.220528398054962,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,0.18542530201051,1.53783792718067,0.206386867963223,0.925972636848558,0.565105371014073,0.410082683163076,1.83022538565218,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0,0,0,0.19318959403219,0.563047426353546,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.376437521661322,0,0.365855945745545,0.263069711437843,0.271608227691724,0,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0.220591419119515,0
|short_description=p5@Slc11a1
}}

Latest revision as of 14:30, 1 October 2015

Short description:p5@Slc11a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Slc11a1_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: -30bp_to_ENSMUST00000027368, ENSMUST00000147233, NM_013612, uc007bly.2_5end
EntrezGene:Slc11a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Slc11a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
myeloid lineage restricted progenitor cell4.49e-1713
myeloid cell1.37e-1316
monopoietic cell5.52e-134
myeloid leukocyte5.52e-134
phagocyte5.52e-134
monocyte5.52e-134
macrophage5.52e-134
tissue-resident macrophage5.52e-134
macrophage dendritic cell progenitor5.52e-134
monoblast5.52e-134
promonocyte5.52e-134
megakaryocyte progenitor cell1.40e-116
megakaryocyte1.40e-116
common myeloid progenitor3.32e-1119
bone marrow cell6.16e-113
mesenchymal stem cell of the bone marrow6.16e-113
hematopoietic lineage restricted progenitor cell3.72e-0825
megakaryocyte-erythroid progenitor cell1.20e-079
bone marrow macrophage1.66e-072
defensive cell1.98e-077
granulocyte monocyte progenitor cell1.98e-077
connective tissue cell2.64e-0746
mesenchymal cell2.64e-0746
central nervous system macrophage4.17e-072
microglial cell4.17e-072

Uber anatomy
Ontology termp-valuen
bone marrow1.80e-2516
musculoskeletal system1.03e-1832
bone element7.25e-1822
skeletal element7.25e-1822
skeletal system7.25e-1822
hematopoietic system2.31e-1245
blood island2.31e-1245
hemolymphoid system2.15e-1148
immune system2.15e-1148
connective tissue2.64e-0746

Disease
Ontology termp-valuen
musculoskeletal system cancer4.27e-103
muscle cancer4.27e-103
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:74421717..74421746,%2B&oldid=4307387"