FFCP PHASE1:Mm9::chr5:109987976..109988033,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:109987976..109988033,- to FFCP PHASE1:Mm9::chr5:109987976..109988033,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57914 | |EntrezGene=57914 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CII9,Q05DC7 | |UniProt=Q8CII9,Q05DC7 | ||
|association_with_transcript=0bp_to_ENSMUST00000044579,NM_001164735,NM_016715,uc008ypg.2,uc008yph.2,uc008ypi.2_5end | |||
|cluster_id=chr5:109987976..109988033,- | |||
|description=CAGE_peak_1_at_Crlf2_5end | |||
|id=chr5:109987976..109988033,- | |||
|ontology_enrichment_celltype=CL:0000988!4.64e-12!32;CL:0002032!4.64e-12!32;CL:0000037!4.64e-12!32;CL:0000566!4.64e-12!32;CL:0000837!4.64e-12!32;CL:0002320!1.20e-10!46;CL:0000134!1.20e-10!46;CL:0000738!2.94e-09!17;CL:0002087!2.94e-09!17;CL:0002031!4.92e-09!25;CL:0000838!1.27e-07!12;CL:0000219!2.35e-07!54;CL:0000542!4.03e-07!13;CL:0000051!4.03e-07!13;CL:0000084!5.05e-07!11;CL:0000827!5.05e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.51e-12,32;CL:0002032,4.51e-12,32;CL:0000037,4.51e-12,32;CL:0000837,4.51e-12,32;CL:0002320,1.18e-10,46;CL:0000134,1.18e-10,46;CL:0000738,2.94e-09,17;CL:0002087,2.94e-09,17;CL:0002031,4.79e-09,25;CL:0000838,1.27e-07,12;CL:0000219,2.31e-07,54;CL:0000542,4.03e-07,13;CL:0000051,4.03e-07,13;CL:0000084,5.05e-07,11;CL:0000827,5.05e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.03e-14!193;UBERON:0004120!6.03e-14!193;UBERON:0006603!6.03e-14!193;UBERON:0002193!1.07e-13!48;UBERON:0002390!8.46e-13!45;UBERON:0003061!8.46e-13!45;UBERON:0002405!2.48e-11!70;UBERON:0003081!5.26e-11!88;UBERON:0002384!1.20e-10!46;UBERON:0001474!2.14e-09!22;UBERON:0004765!2.14e-09!22;UBERON:0001434!2.14e-09!22;UBERON:0002371!2.85e-09!16;UBERON:0002204!7.81e-09!32;UBERON:0003104!1.56e-07!131;UBERON:0009142!1.56e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.67e-14,120;UBERON:0004120,8.67e-14,120;UBERON:0006603,8.67e-14,120;UBERON:0002193,1.05e-13,48;UBERON:0002405,1.05e-13,48;UBERON:0002390,8.25e-13,45;UBERON:0003061,8.25e-13,45;UBERON:0002384,1.18e-10,46;UBERON:0003081,1.36e-10,87;UBERON:0001474,2.14e-09,22;UBERON:0004765,2.14e-09,22;UBERON:0001434,2.14e-09,22;UBERON:0002371,2.85e-09,16;UBERON:0002204,7.81e-09,32;UBERON:0000077,3.36e-07,35 | |||
|phase1_expression=10.5698239089164,9.07336059862339,15.4699741392442,1.81478526784098,5.50985302940982,4.8684988854448,5.84031601488814,28.4071311571468,56.3154888606667,41.8975502116368,58.2141091966717,21.9373437237175,37.3217591250028,19.9318517515314,12.6581709489952,13.970793449898,7.69518065940961,62.4615087409311,49.9096538324889,50.0779789121676,5.78294373027274,27.1064296778417,26.1199789138935,8.63959083084396,12.8469197397615,12.0588712464154,5.1691439539089,7.97243560937789,5.32065574477847,2.26827116783938,12.1951780860418,1.90509202037889,5.53558308826113,0,1.1554064790051,1.66234645358492,2.24586291888606,193.780145031188,166.42442838357,79.0520853400435,218.233882059506,210.378009367201,151.964740498751,4.78407908307194,6.2853697356099,4.9557623083654,9.38869613217647,1.52617609466313,8.12838876117546,4.47188767870852,2.93971485413261,1.43752564364972,63.4218250898243,36.9934692425786,30.9206295211067,4.3734104126111,5.44413535883638,3.09403255366465,1.21389876515759,3.1739458756322,1.26766280701236,6.09920157724438,6.22506357277798,140.834305754539,160.19635073585,154.174184943304,35.9520132622086,26.8952813725088,2.28117147078651,3.24014251996058,1.47227472945967,4.85606673486466,5.96345060569357,2.08234358665422,1.72521847832825,3.67687514644008,1.10115880999389,1.14918604276669,0.614426133024974,1.31886287730194,1.55528994124096,1.04182674111352,3.35019598801657,1.12552522006336,0.916789486660861,2.35702868378934,2.56269025438385,2.79599168737951,2.49896437999507,1.88928900266964,36.5229255764114,19.7897491705719,1.3599426674155,1.07940638327563,7.14754059192436,2.68816132258401,4.21333260395256,2.38602451609281,7.01422212427746,6.36011234118612,1.97180787687353,5.13305909657271,2.54805239706646,0,4.97929394325792,6.08063677140237,5.05524445014783,3.19714863213368,29.7778566194247,20.1881309128162,5.55153045651635,7.91610243611567,9.22461989024234,12.9621470875255,11.8764594207062,11.1843266283411,12.8541383221874,11.423349196673,33.6152009740952,12.1325137460557,12.1462835153216,13.091631834651,3.72783522436244,5.27005434620785,4.39838084308256,8.17462576667492,71.2899990810226,73.1881331811957,59.8500769514135,4.19413790333504,6.40500843946077,7.28795242254614,5.56237824615285,5.11430914660661,6.02585329222724,6.48965052271031,9.980257657331,20.029522268225,18.4487613656583,8.83855794723191,1.56144531555244,1.83921683546778,2.52086981727489,2.86339153887859,4.150226448231,3.58718416797579,4.68508622798644,6.46758426847539,1.29340795759705,3.40390944302075,3.51902248327898,3.28793598641362,2.22437799380478,5.2237824978325,8.23128545631774,2.9855140022774,33.004019803722,45.8079274664193,49.7286123942287,2.69263504296152,3.04883877975425,2.52086886045421,4.7348947117042,4.13204886669548,3.5481435964097,3.25547522650571,4.29237442239391,7.58974725386602,8.3925523455875,8.20837320395476,10.9442892886905,11.5497990066013,9.66020507280623,10.1996878257883,3.78521907415429,3.2929475961371,5.28670052774077,2.11560453330835,5.33220626338085,2.78684006232526,3.8660238396628,2.8235693447268,4.00280478920767,4.56541502670142,7.59246498471219,7.90554982675252,8.29406189040889,9.94782360205754,9.55324026883689,9.88701349519644,4.75503709724327,4.77939055810481,4.93136542478012,3.42745537829186,4.50830942692322,3.86937522906097,4.84881217919064,8.90724912607046,8.09427675190493,3.69025369949005,4.39596437955849,5.92306386824642,10.9687472022245,2.8363667971736,2.55526693647164,3.59779379815766,4.05720242777006,5.06472035480075,7.89340140522401,6.32931502391783,15.0785760900783,6.04035109013779,17.2521847832825,14.1413560114031,12.1694692514679,6.31447194867779,5.38192240565737,10.1313139486307,21.8008764396594,3.60033682363921,3.7481944581666,5.09235257325564,5.39787571063555,7.70528784232352,12.1402256851867,16.9766273636285,14.817703545982,19.9318220683897,19.4534817762134,14.7476983244164,16.7504432409919,18.370430439852,64.8402520938871,41.3368319702219,15.2446924635901,9.3818493743609,3.69266356971921,3.16471553798949,6.72133276044369,8.83648245215305,1.26203287766503,3.12350995437311,2.15423397732799,1.43381278771531,3.34198011123591,2.83076530788832,3.23848561339915,2.92255857911312,0.790575555893047,6.10510501201433,9.509985708954,10.5058706163681,11.5649741141039,8.90838664051691,3.98235415019888,4.37005145078967,5.44182402536552,2.07465587731488,7.08724542913855,7.37844355065426,10.0787034335606,6.5436071305951,7.48644494607915,4.10847785316561,9.48767477174989,14.4389760547462,3.06395645178409,1.08036656418786,2.71653235943784,2.7863814554107,3.3694644392032,3.21063871683727,2.30368628842969,6.08929898229199,12.9069439435041,16.522901527378,11.9085334949679,8.40919890001548,7.42736362801165,4.58378229453985,5.49112782414428,5.58079059133208,6.99554007911642,5.19190845629427,22.7258271461144,13.6215332855727,15.5563402990558,12.6206866193143,12.9859516334974,18.7598102029349,129.353585225324,112.381016215897,124.518176397786,2.86401185404534,2.68885594543965,3.25311147402958,3.02414954301044,3.76358932826044,3.27543845619266,6.06889558731693,7.68677138245624,5.23511883968059,4.53652406521275,12.4267862617385,3.38215763210514,3.13984746692355,5.95650565645551,6.22243802700952,6.71631082084202,10.3063236549375,10.9142231940551,7.55185432094911,4.8235298435827,2.89900944991207,3.16833006883652,9.79634473947353,7.70355818102624,6.26536838705446,6.23619950293416,5.37080087002444,5.36439657909415,12.5003267500768,8.12292399460175,8.98601404538514,13.488604777935,11.5950112907367,14.6186821109629,11.6416328384799,12.1551978268832,5.44152920676507,1.33191572024439,2.78112955489375,1.51096154727671,11.5913756419314,23.2726269559466,9.34073283763052,9.00347192132076,17.5550236412377,4.51801474093653,6.90487854760765,2.29158205375759,7.56154002312225,8.90607275701835,3.7769694869485,8.77529250301348,5.40385443869065,6.34399372577886,6.21312374102184,0.62272408550506,3.99024873401031,2.73173769206615,4.132814190161,2.30574478890781,2.75765262675021,4.00044110042907,3.91466608753899,3.20919209591815,4.29585259998456,4.56262739802432,2.82939512079114,4.96299989590377,4.67383612555546,4.47996657853783,5.23923060411381,4.51948871184936,3.47236596834669,0.412085900803307,3.09117732282234,3.08582327146874,3.01708870470874,2.38436189947321,4.21504608233753,3.57615645578256,3.89227196301712,3.47563148458268,2.10455769150274,3.12349461845482,3.36685362994643,3.32178050747688,4.23569274214923,2.86461730218783,4.80304207676495,6.55882477335881,5.49583271463481,7.95367468714389,5.80151845930405,13.390183244819,13.4560765662904,9.27471342481686 | |phase1_expression=10.5698239089164,9.07336059862339,15.4699741392442,1.81478526784098,5.50985302940982,4.8684988854448,5.84031601488814,28.4071311571468,56.3154888606667,41.8975502116368,58.2141091966717,21.9373437237175,37.3217591250028,19.9318517515314,12.6581709489952,13.970793449898,7.69518065940961,62.4615087409311,49.9096538324889,50.0779789121676,5.78294373027274,27.1064296778417,26.1199789138935,8.63959083084396,12.8469197397615,12.0588712464154,5.1691439539089,7.97243560937789,5.32065574477847,2.26827116783938,12.1951780860418,1.90509202037889,5.53558308826113,0,1.1554064790051,1.66234645358492,2.24586291888606,193.780145031188,166.42442838357,79.0520853400435,218.233882059506,210.378009367201,151.964740498751,4.78407908307194,6.2853697356099,4.9557623083654,9.38869613217647,1.52617609466313,8.12838876117546,4.47188767870852,2.93971485413261,1.43752564364972,63.4218250898243,36.9934692425786,30.9206295211067,4.3734104126111,5.44413535883638,3.09403255366465,1.21389876515759,3.1739458756322,1.26766280701236,6.09920157724438,6.22506357277798,140.834305754539,160.19635073585,154.174184943304,35.9520132622086,26.8952813725088,2.28117147078651,3.24014251996058,1.47227472945967,4.85606673486466,5.96345060569357,2.08234358665422,1.72521847832825,3.67687514644008,1.10115880999389,1.14918604276669,0.614426133024974,1.31886287730194,1.55528994124096,1.04182674111352,3.35019598801657,1.12552522006336,0.916789486660861,2.35702868378934,2.56269025438385,2.79599168737951,2.49896437999507,1.88928900266964,36.5229255764114,19.7897491705719,1.3599426674155,1.07940638327563,7.14754059192436,2.68816132258401,4.21333260395256,2.38602451609281,7.01422212427746,6.36011234118612,1.97180787687353,5.13305909657271,2.54805239706646,0,4.97929394325792,6.08063677140237,5.05524445014783,3.19714863213368,29.7778566194247,20.1881309128162,5.55153045651635,7.91610243611567,9.22461989024234,12.9621470875255,11.8764594207062,11.1843266283411,12.8541383221874,11.423349196673,33.6152009740952,12.1325137460557,12.1462835153216,13.091631834651,3.72783522436244,5.27005434620785,4.39838084308256,8.17462576667492,71.2899990810226,73.1881331811957,59.8500769514135,4.19413790333504,6.40500843946077,7.28795242254614,5.56237824615285,5.11430914660661,6.02585329222724,6.48965052271031,9.980257657331,20.029522268225,18.4487613656583,8.83855794723191,1.56144531555244,1.83921683546778,2.52086981727489,2.86339153887859,4.150226448231,3.58718416797579,4.68508622798644,6.46758426847539,1.29340795759705,3.40390944302075,3.51902248327898,3.28793598641362,2.22437799380478,5.2237824978325,8.23128545631774,2.9855140022774,33.004019803722,45.8079274664193,49.7286123942287,2.69263504296152,3.04883877975425,2.52086886045421,4.7348947117042,4.13204886669548,3.5481435964097,3.25547522650571,4.29237442239391,7.58974725386602,8.3925523455875,8.20837320395476,10.9442892886905,11.5497990066013,9.66020507280623,10.1996878257883,3.78521907415429,3.2929475961371,5.28670052774077,2.11560453330835,5.33220626338085,2.78684006232526,3.8660238396628,2.8235693447268,4.00280478920767,4.56541502670142,7.59246498471219,7.90554982675252,8.29406189040889,9.94782360205754,9.55324026883689,9.88701349519644,4.75503709724327,4.77939055810481,4.93136542478012,3.42745537829186,4.50830942692322,3.86937522906097,4.84881217919064,8.90724912607046,8.09427675190493,3.69025369949005,4.39596437955849,5.92306386824642,10.9687472022245,2.8363667971736,2.55526693647164,3.59779379815766,4.05720242777006,5.06472035480075,7.89340140522401,6.32931502391783,15.0785760900783,6.04035109013779,17.2521847832825,14.1413560114031,12.1694692514679,6.31447194867779,5.38192240565737,10.1313139486307,21.8008764396594,3.60033682363921,3.7481944581666,5.09235257325564,5.39787571063555,7.70528784232352,12.1402256851867,16.9766273636285,14.817703545982,19.9318220683897,19.4534817762134,14.7476983244164,16.7504432409919,18.370430439852,64.8402520938871,41.3368319702219,15.2446924635901,9.3818493743609,3.69266356971921,3.16471553798949,6.72133276044369,8.83648245215305,1.26203287766503,3.12350995437311,2.15423397732799,1.43381278771531,3.34198011123591,2.83076530788832,3.23848561339915,2.92255857911312,0.790575555893047,6.10510501201433,9.509985708954,10.5058706163681,11.5649741141039,8.90838664051691,3.98235415019888,4.37005145078967,5.44182402536552,2.07465587731488,7.08724542913855,7.37844355065426,10.0787034335606,6.5436071305951,7.48644494607915,4.10847785316561,9.48767477174989,14.4389760547462,3.06395645178409,1.08036656418786,2.71653235943784,2.7863814554107,3.3694644392032,3.21063871683727,2.30368628842969,6.08929898229199,12.9069439435041,16.522901527378,11.9085334949679,8.40919890001548,7.42736362801165,4.58378229453985,5.49112782414428,5.58079059133208,6.99554007911642,5.19190845629427,22.7258271461144,13.6215332855727,15.5563402990558,12.6206866193143,12.9859516334974,18.7598102029349,129.353585225324,112.381016215897,124.518176397786,2.86401185404534,2.68885594543965,3.25311147402958,3.02414954301044,3.76358932826044,3.27543845619266,6.06889558731693,7.68677138245624,5.23511883968059,4.53652406521275,12.4267862617385,3.38215763210514,3.13984746692355,5.95650565645551,6.22243802700952,6.71631082084202,10.3063236549375,10.9142231940551,7.55185432094911,4.8235298435827,2.89900944991207,3.16833006883652,9.79634473947353,7.70355818102624,6.26536838705446,6.23619950293416,5.37080087002444,5.36439657909415,12.5003267500768,8.12292399460175,8.98601404538514,13.488604777935,11.5950112907367,14.6186821109629,11.6416328384799,12.1551978268832,5.44152920676507,1.33191572024439,2.78112955489375,1.51096154727671,11.5913756419314,23.2726269559466,9.34073283763052,9.00347192132076,17.5550236412377,4.51801474093653,6.90487854760765,2.29158205375759,7.56154002312225,8.90607275701835,3.7769694869485,8.77529250301348,5.40385443869065,6.34399372577886,6.21312374102184,0.62272408550506,3.99024873401031,2.73173769206615,4.132814190161,2.30574478890781,2.75765262675021,4.00044110042907,3.91466608753899,3.20919209591815,4.29585259998456,4.56262739802432,2.82939512079114,4.96299989590377,4.67383612555546,4.47996657853783,5.23923060411381,4.51948871184936,3.47236596834669,0.412085900803307,3.09117732282234,3.08582327146874,3.01708870470874,2.38436189947321,4.21504608233753,3.57615645578256,3.89227196301712,3.47563148458268,2.10455769150274,3.12349461845482,3.36685362994643,3.32178050747688,4.23569274214923,2.86461730218783,4.80304207676495,6.55882477335881,5.49583271463481,7.95367468714389,5.80151845930405,13.390183244819,13.4560765662904,9.27471342481686 | ||
|short_description=p1@Crlf2 | |||
}} | }} |
Latest revision as of 14:52, 1 October 2015
Short description: | p1@Crlf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Crlf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000044579, NM_001164735, NM_016715, uc008ypg.2, uc008yph.2, uc008ypi.2_5end |
EntrezGene: | Crlf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.51e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.51e-12 | 32 |
hematopoietic stem cell | 4.51e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.51e-12 | 32 |
connective tissue cell | 1.18e-10 | 46 |
mesenchymal cell | 1.18e-10 | 46 |
leukocyte | 2.94e-09 | 17 |
nongranular leukocyte | 2.94e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 4.79e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.27e-07 | 12 |
motile cell | 2.31e-07 | 54 |
lymphocyte | 4.03e-07 | 13 |
common lymphoid progenitor | 4.03e-07 | 13 |
T cell | 5.05e-07 | 11 |
pro-T cell | 5.05e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.67e-14 | 120 |
mesoderm-derived structure | 8.67e-14 | 120 |
presumptive mesoderm | 8.67e-14 | 120 |
hemolymphoid system | 1.05e-13 | 48 |
immune system | 1.05e-13 | 48 |
hematopoietic system | 8.25e-13 | 45 |
blood island | 8.25e-13 | 45 |
connective tissue | 1.18e-10 | 46 |
lateral plate mesoderm | 1.36e-10 | 87 |
bone element | 2.14e-09 | 22 |
skeletal element | 2.14e-09 | 22 |
skeletal system | 2.14e-09 | 22 |
bone marrow | 2.85e-09 | 16 |
musculoskeletal system | 7.81e-09 | 32 |
mixed endoderm/mesoderm-derived structure | 3.36e-07 | 35 |