FFCP PHASE1:Mm9::chr5:112658087..112658107,-: Difference between revisions
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{{FFCP|EntrezGene=330166|HGNC=|MCL_coexpression_id=979|UniProt=|association_with_transcript=-119bp_to_ENSMUST00000146058,NR_003718,NR_033657,uc008ysk.2,uc008ysl.2,uc008ysm.2,uc008ysn.2,uc008yso.2,uc008ysp.2,uc008ysq.2,uc008ysr.2,uc008yss.2,uc012ebf.1_5end|description=CAGE_peak_5_at_Miat_5end|id=chr5:112658087..112658107,-|ontology_enrichment_celltype=CL:0000540!1.19e-23!33;CL:0000047!1.19e-23!33;CL:0000031!1.19e-23!33;CL:0000404!1.19e-23!33;CL:0002319!4.91e-18!43;CL:0000393!5.25e-18!39;CL:0000211!5.25e-18!39;CL:0000221!2.54e-17!44;CL:0000133!2.54e-17!44;CL:0000117!1.39e-14!23;CL:0000337!1.39e-14!23;CL:0000055!1.10e-13!50;CL:0000107!7.19e-10!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.06e-23,9;CL:0000540,4.00e-21,33;CL:0000047,4.00e-21,33;CL:0000031,4.00e-21,33;CL:0000404,4.00e-21,33;CL:0000393,3.12e-17,39;CL:0000211,3.12e-17,39;CL:0002319,3.04e-15,43;CL:0000221,8.39e-15,44;CL:0000133,8.39e-15,44;CL:0000120,5.29e-08,3;CL:0002610,6.26e-08,3;CL:0002321,8.30e-08,70;CL:0000117,7.45e-07,23;CL:0000337,7.45e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.26e-29!73;UBERON:0005743!2.26e-29!73;UBERON:0000073!6.84e-29!75;UBERON:0001016!6.84e-29!75;UBERON:0004121!1.62e-26!102;UBERON:0000924!1.62e-26!102;UBERON:0006601!1.62e-26!102;UBERON:0002346!8.85e-22!71;UBERON:0003075!8.85e-22!71;UBERON:0007284!8.85e-22!71;UBERON:0000033!1.03e-19!63;UBERON:0003056!1.99e-18!49;UBERON:0001049!8.46e-17!52;UBERON:0005068!8.46e-17!52;UBERON:0006241!8.46e-17!52;UBERON:0007135!8.46e-17!52;UBERON:0000955!2.60e-16!50;UBERON:0006238!2.60e-16!50;UBERON:0002616!6.37e-16!49;UBERON:0003080!7.65e-14!40;UBERON:0002020!9.94e-14!34;UBERON:0002780!4.88e-13!39;UBERON:0001890!4.88e-13!39;UBERON:0006240!4.88e-13!39;UBERON:0000153!1.30e-11!94;UBERON:0002791!2.83e-11!29;UBERON:0003528!2.83e-11!29;UBERON:0001893!2.83e-11!29;UBERON:0007811!3.71e-11!86;UBERON:0002410!7.19e-10!9;UBERON:0000010!1.62e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.15e-26,95;UBERON:0000924,1.15e-26,95;UBERON:0006601,1.15e-26,95;UBERON:0002410,2.06e-23,9;UBERON:0001017,3.97e-21,73;UBERON:0001016,2.11e-20,75;UBERON:0000010,7.83e-19,11;UBERON:0002346,1.02e-15,64;UBERON:0003075,1.02e-15,64;UBERON:0007284,1.02e-15,64;UBERON:0003056,4.43e-14,49;UBERON:0000970,4.92e-14,9;UBERON:0000019,4.92e-14,9;UBERON:0000047,4.92e-14,9;UBERON:0010312,4.92e-14,9;UBERON:0004088,4.92e-14,9;UBERON:0002104,4.92e-14,9;UBERON:0001456,4.92e-14,9;UBERON:0003072,4.92e-14,9;UBERON:0004128,4.92e-14,9;UBERON:0003071,4.92e-14,9;UBERON:0010371,3.85e-13,73;UBERON:0001444,2.77e-11,11;UBERON:0000020,2.98e-10,12;UBERON:0001032,2.98e-10,12;UBERON:0004456,2.98e-10,12;UBERON:0000033,2.22e-09,13;UBERON:0005085,2.22e-09,13;UBERON:0010314,2.28e-09,92;UBERON:0000013,4.27e-09,3;UBERON:0000011,7.80e-09,3;UBERON:0010313,1.11e-08,3;UBERON:0002342,1.11e-08,3;UBERON:0002005,1.11e-08,3;UBERON:0005428,1.11e-08,3;UBERON:0005062,1.11e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0000073,7.85e-08,54|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.945041568321835,0,0.571301968807607,0.662605622854841,0.489963196859816,0.862609239164127,0.919218786610021,2.20231761998777,1.27687338085188,1.0752457327937,0.659431438650969,1.00636407962651,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,0.294628585473668,0.569486723196412,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,2.09706895166752,0.457500602818626,1.00523481690292,0.695297280769106,2.30143911597297,1.24672826735736,1.29793010454206,0,0,0,0,1.17108398666433,2.06911893990126,2.34080768746954,2.71268672104287,4.62648194229029,3.33095672740609,1.68663104207512,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.823236899034275,0,0,0.853153002140936,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0,0,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,1.57754109708128,1.56175497718655,4.52389135238878,1.43381278771531,3.34198011123591,2.54768877709949,2.02405350837447,3.79932615284705,3.16230222357219,0.321321316421807,0,0,0,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.428674070063185,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,0,0.68741272937475,1.37016503954128,0,0,1.35096360967266,0.906284817968409,0.51776031175182,0.415149390336707,0.798049746802062,0.512200817262403,0,0,0,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0,0.37456602987953,0.256100609619477,0.287177344778066,0,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0,0.561142271657738,0.593175090620871,0.689531376628944,0,0.154936841185966,0.385813221962283,0.999242311751784,0,0,0.382576664137687,0.220591419119515,0|short_description=p5@Miat}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330166 | |||
|HGNC= | |||
|MCL_coexpression_id=979 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-119bp_to_ENSMUST00000146058,NR_003718,NR_033657,uc008ysk.2,uc008ysl.2,uc008ysm.2,uc008ysn.2,uc008yso.2,uc008ysp.2,uc008ysq.2,uc008ysr.2,uc008yss.2,uc012ebf.1_5end | |||
|cluster_id=chr5:112658087..112658107,- | |||
|description=CAGE_peak_5_at_Miat_5end | |||
|id=chr5:112658087..112658107,- | |||
|ontology_enrichment_celltype=CL:0000540!1.19e-23!33;CL:0000047!1.19e-23!33;CL:0000031!1.19e-23!33;CL:0000404!1.19e-23!33;CL:0002319!4.91e-18!43;CL:0000393!5.25e-18!39;CL:0000211!5.25e-18!39;CL:0000221!2.54e-17!44;CL:0000133!2.54e-17!44;CL:0000117!1.39e-14!23;CL:0000337!1.39e-14!23;CL:0000055!1.10e-13!50;CL:0000107!7.19e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.06e-23,9;CL:0000540,4.00e-21,33;CL:0000047,4.00e-21,33;CL:0000031,4.00e-21,33;CL:0000404,4.00e-21,33;CL:0000393,3.12e-17,39;CL:0000211,3.12e-17,39;CL:0002319,3.04e-15,43;CL:0000221,8.39e-15,44;CL:0000133,8.39e-15,44;CL:0000120,5.29e-08,3;CL:0002610,6.26e-08,3;CL:0002321,8.30e-08,70;CL:0000117,7.45e-07,23;CL:0000337,7.45e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-29!73;UBERON:0005743!2.26e-29!73;UBERON:0000073!6.84e-29!75;UBERON:0001016!6.84e-29!75;UBERON:0004121!1.62e-26!102;UBERON:0000924!1.62e-26!102;UBERON:0006601!1.62e-26!102;UBERON:0002346!8.85e-22!71;UBERON:0003075!8.85e-22!71;UBERON:0007284!8.85e-22!71;UBERON:0000033!1.03e-19!63;UBERON:0003056!1.99e-18!49;UBERON:0001049!8.46e-17!52;UBERON:0005068!8.46e-17!52;UBERON:0006241!8.46e-17!52;UBERON:0007135!8.46e-17!52;UBERON:0000955!2.60e-16!50;UBERON:0006238!2.60e-16!50;UBERON:0002616!6.37e-16!49;UBERON:0003080!7.65e-14!40;UBERON:0002020!9.94e-14!34;UBERON:0002780!4.88e-13!39;UBERON:0001890!4.88e-13!39;UBERON:0006240!4.88e-13!39;UBERON:0000153!1.30e-11!94;UBERON:0002791!2.83e-11!29;UBERON:0003528!2.83e-11!29;UBERON:0001893!2.83e-11!29;UBERON:0007811!3.71e-11!86;UBERON:0002410!7.19e-10!9;UBERON:0000010!1.62e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.15e-26,95;UBERON:0000924,1.15e-26,95;UBERON:0006601,1.15e-26,95;UBERON:0002410,2.06e-23,9;UBERON:0001017,3.97e-21,73;UBERON:0001016,2.11e-20,75;UBERON:0000010,7.83e-19,11;UBERON:0002346,1.02e-15,64;UBERON:0003075,1.02e-15,64;UBERON:0007284,1.02e-15,64;UBERON:0003056,4.43e-14,49;UBERON:0000970,4.92e-14,9;UBERON:0000019,4.92e-14,9;UBERON:0000047,4.92e-14,9;UBERON:0010312,4.92e-14,9;UBERON:0004088,4.92e-14,9;UBERON:0002104,4.92e-14,9;UBERON:0001456,4.92e-14,9;UBERON:0003072,4.92e-14,9;UBERON:0004128,4.92e-14,9;UBERON:0003071,4.92e-14,9;UBERON:0010371,3.85e-13,73;UBERON:0001444,2.77e-11,11;UBERON:0000020,2.98e-10,12;UBERON:0001032,2.98e-10,12;UBERON:0004456,2.98e-10,12;UBERON:0000033,2.22e-09,13;UBERON:0005085,2.22e-09,13;UBERON:0010314,2.28e-09,92;UBERON:0000013,4.27e-09,3;UBERON:0000011,7.80e-09,3;UBERON:0010313,1.11e-08,3;UBERON:0002342,1.11e-08,3;UBERON:0002005,1.11e-08,3;UBERON:0005428,1.11e-08,3;UBERON:0005062,1.11e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0000073,7.85e-08,54 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.945041568321835,0,0.571301968807607,0.662605622854841,0.489963196859816,0.862609239164127,0.919218786610021,2.20231761998777,1.27687338085188,1.0752457327937,0.659431438650969,1.00636407962651,1.04182674111352,0.837548997004143,0.56276261003168,0.916789486660861,0.294628585473668,0.569486723196412,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,2.09706895166752,0.457500602818626,1.00523481690292,0.695297280769106,2.30143911597297,1.24672826735736,1.29793010454206,0,0,0,0,1.17108398666433,2.06911893990126,2.34080768746954,2.71268672104287,4.62648194229029,3.33095672740609,1.68663104207512,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.823236899034275,0,0,0.853153002140936,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0,0,0.397912944082302,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.820481806145422,0,0,1.57754109708128,1.56175497718655,4.52389135238878,1.43381278771531,3.34198011123591,2.54768877709949,2.02405350837447,3.79932615284705,3.16230222357219,0.321321316421807,0,0,0,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0,0.900305470156551,0.776152102696527,0.428674070063185,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,0,0.68741272937475,1.37016503954128,0,0,1.35096360967266,0.906284817968409,0.51776031175182,0.415149390336707,0.798049746802062,0.512200817262403,0,0,0,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0,0.37456602987953,0.256100609619477,0.287177344778066,0,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0,0.561142271657738,0.593175090620871,0.689531376628944,0,0.154936841185966,0.385813221962283,0.999242311751784,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p5@Miat | |||
}} |
Latest revision as of 15:33, 1 October 2015
Short description: | p5@Miat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Miat_5end |
Coexpression cluster: | MCL_coexpression_mm9:979 |
Association with transcript: | -119bp_to_ENSMUST00000146058, NR_003718, NR_033657, uc008ysk.2, uc008ysl.2, uc008ysm.2, uc008ysn.2, uc008yso.2, uc008ysp.2, uc008ysq.2, uc008ysr.2, uc008yss.2, uc012ebf.1_5end |
EntrezGene: | Miat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.06e-23 | 9 |
neuron | 4.00e-21 | 33 |
neuronal stem cell | 4.00e-21 | 33 |
neuroblast | 4.00e-21 | 33 |
electrically signaling cell | 4.00e-21 | 33 |
electrically responsive cell | 3.12e-17 | 39 |
electrically active cell | 3.12e-17 | 39 |
neural cell | 3.04e-15 | 43 |
ectodermal cell | 8.39e-15 | 44 |
neurectodermal cell | 8.39e-15 | 44 |
granule cell | 5.29e-08 | 3 |
raphe nuclei neuron | 6.26e-08 | 3 |
embryonic cell | 8.30e-08 | 70 |
CNS neuron (sensu Vertebrata) | 7.45e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.45e-07 | 23 |