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FFCP PHASE1:Mm9::chr1:75542632..75542670,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20536
|EntrezGene=20536
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9QL58,P16283,Q68EG4
|UniProt=E9QL58,P16283,Q68EG4
|association_with_transcript=-170bp_to_ENSMUST00000113545,ENSMUST00000124341,NM_009208,uc007bpv.2_5end
|association_with_transcript=-170bp_to_ENSMUST00000113545,ENSMUST00000124341,NM_009208,uc007bpv.2_5end
|cluster_id=chr1:75542632..75542670,+
|description=CAGE_peak_4_at_Slc4a3_5end
|description=CAGE_peak_4_at_Slc4a3_5end
|id=chr1:75542632..75542670,+
|id=chr1:75542632..75542670,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-07,23;CL:0000337,4.49e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.14e-14!71;UBERON:0003075!1.14e-14!71;UBERON:0007284!1.14e-14!71;UBERON:0004121!1.91e-12!102;UBERON:0000924!1.91e-12!102;UBERON:0006601!1.91e-12!102;UBERON:0000033!3.11e-10!63;UBERON:0001049!1.09e-09!52;UBERON:0005068!1.09e-09!52;UBERON:0006241!1.09e-09!52;UBERON:0007135!1.09e-09!52;UBERON:0001017!2.38e-09!73;UBERON:0005743!2.38e-09!73;UBERON:0003103!2.53e-09!43;UBERON:0000955!9.41e-09!50;UBERON:0006238!9.41e-09!50;UBERON:0000073!1.77e-08!75;UBERON:0001016!1.77e-08!75;UBERON:0002616!2.99e-08!49;UBERON:0000489!3.91e-07!21;UBERON:0003076!4.01e-07!12;UBERON:0003057!4.01e-07!12;UBERON:0003056!5.31e-07!49;UBERON:0000991!8.69e-07!18;UBERON:0005564!8.69e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.03e-18,92;UBERON:0003103,8.34e-12,43;UBERON:0000073,4.20e-09,54;UBERON:0002346,9.25e-09,64;UBERON:0003075,9.25e-09,64;UBERON:0007284,9.25e-09,64;UBERON:0003076,1.49e-08,12;UBERON:0003057,1.49e-08,12;UBERON:0001017,4.03e-08,73;UBERON:0001049,4.22e-08,52;UBERON:0005068,4.22e-08,52;UBERON:0006241,4.22e-08,52;UBERON:0007135,4.22e-08,52;UBERON:0000489,5.45e-08,21;UBERON:0002369,1.05e-07,7;UBERON:0006858,1.05e-07,7;UBERON:0001016,1.35e-07,75;UBERON:0000991,1.45e-07,18;UBERON:0005564,1.45e-07,18;UBERON:0007100,3.51e-07,18;UBERON:0000948,3.51e-07,18;UBERON:0005498,3.51e-07,18;UBERON:0004140,3.51e-07,18;UBERON:0009881,3.51e-07,18;UBERON:0004141,3.51e-07,18;UBERON:0003084,3.51e-07,18;UBERON:0007005,3.51e-07,18;UBERON:0004139,3.51e-07,18;UBERON:0004291,3.51e-07,18;UBERON:0004176,3.76e-07,17;UBERON:0009196,3.76e-07,17;UBERON:0009117,3.76e-07,17
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.881277725829041,0.304130793658544,0.550640256485045,1.56478268869608,0.65407546914134,0.659058548203415,1.74986909166855,0.419959264876088,0,0,0,0,0,0.286533439938757,0,1.82084814773638,2.11596391708813,2.53532561402472,0,0,0,0,0,1.19840044207362,1.15265491596466,0.207379224616955,0,0.210324961351382,4.57041575046086,4.63823935998388,0.122490799214954,0.479227355091182,0,2.20231761998777,4.85211884723713,3.37934373163736,3.03338461779446,1.18933936683133,1.04182674111352,3.07101298901519,3.37657566019008,4.73674568108111,4.71405736757868,4.55589378557129,2.05039390407831,0,0,5.50742528533188,0,0,0,0,0,0.421333260395256,0.681721290312231,1.03914401841148,1.06001872353102,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,25.383605780085,1.73485326766136,4.87144765299426,6.22661842591358,7.988299949289,8.46638691377075,11.1843266283411,0,0.144599356919912,0,0.485300549842228,0,0.484875253135222,0,5.5628351432194,6.70229461803056,0,0,0,0,4.6435098215495,2.74500361691176,1.63350657746724,2.60736480288415,2.04572365864264,4.57133698031032,4.54275536589721,0.611036183101898,0.124406970610093,0.252722758433675,4.62972082950243,0.520481771850815,0.459804208866946,0.720248519221397,1.05493372485001,2.78949646520444,2.3060469651273,1.68663104207512,8.53721123438752,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,1.79130840136644,0,0,0,0.414251545071004,1.87620847984877,1.44049649168812,3.07768156260773,4.13204886669548,2.93107514486019,4.41814495025775,3.48755421819505,5.60473643362414,3.62031669809657,3.77585167381919,3.56702762001765,4.38599962275997,3.07370161407471,3.35516046900929,1.05144974282064,0.92614151141356,0,0,0.426576501070468,0,0.38660238396628,0.605050573870028,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.379335801906163,1.48523066392647,1.1270773567308,1.62921062276251,3.87904974335251,2.73529697572242,2.33975187359752,3.54264355151045,1.56998727841375,3.82531208157582,0,0,0,0,0,0,0,0,0.486405680325106,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,4.0137647496948,5.50894926983355,0,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.876767573733936,0,5.14114106274891,7.66476460124651,1.95872164033981,1.14020871547503,0.494910368917606,0,0.242780636154981,0.906970670894253,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,1.45413491791002,1.06949213515416,0.948110273807448,1.05418608574999,0,1.70219802876894,0,0.258717367565509,0.214337035031592,0.532020700926821,0.535106452806212,1.48094118541909,0.304464949114599,0.23467170806371,0.42366414172764,0.661585194164886,0.16488625294148,0.322928853391811,0.422190474497091,0.119372344003136,0.492422699235184,0.291480836629851,3.52308073819968,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0.87345025498471,0.269728692769641,0.909188012978695,0.785267825952089,0.388844919875379,0,1.12738587736838,1.64468200648377,2.97825282822776,3.69457257853691,0.516639293910924,2.53434188236167,1.76035857968631,3.9061315453185,6.71099804324549,5.55643477899814,4.03242008761012,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0,2.31827512838629,0.375364950902364,0.183151624267265,0,3.51100472824754,2.82375921308533,1.38097570952153,1.71868654031819,1.71853182343688,0.685082519770642,0.755393897389701,2.02506750069542,0.900642406448441,0.906284817968409,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,1.33348036680969,2.26638562962784,1.28367683836726,1.01078884705519,0.50695859978048,1.50901073108861,0.842773567228942,0.640251524048693,1.66562859971278,2.38146845641537,1.50649623728312,1.35036454324594,2.47251540481984,1.61918812147837,0,0.70990322463735,0.715308569841963,0.872078499793971,0.752875043322645,0.846146078916765,0.548783918618318,1.31534855718921,1.49384525230448,1.12228454331548,0.474540072496697,0.788035859004508,0.818462086339379,0.77468420592983,1.15743966588685,1.74867404556562,1.63752125911786,0.214871054048298,1.91288332068843,0.882365676478062,0.927471342481686
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.881277725829041,0.304130793658544,0.550640256485045,1.56478268869608,0.65407546914134,0.659058548203415,1.74986909166855,0.419959264876088,0,0,0,0,0,0.286533439938757,0,1.82084814773638,2.11596391708813,2.53532561402472,0,0,0,0,0,1.19840044207362,1.15265491596466,0.207379224616955,0,0.210324961351382,4.57041575046086,4.63823935998388,0.122490799214954,0.479227355091182,0,2.20231761998777,4.85211884723713,3.37934373163736,3.03338461779446,1.18933936683133,1.04182674111352,3.07101298901519,3.37657566019008,4.73674568108111,4.71405736757868,4.55589378557129,2.05039390407831,0,0,5.50742528533188,0,0,0,0,0,0.421333260395256,0.681721290312231,1.03914401841148,1.06001872353102,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,25.383605780085,1.73485326766136,4.87144765299426,6.22661842591358,7.988299949289,8.46638691377075,11.1843266283411,0,0.144599356919912,0,0.485300549842228,0,0.484875253135222,0,5.5628351432194,6.70229461803056,0,0,0,0,4.6435098215495,2.74500361691176,1.63350657746724,2.60736480288415,2.04572365864264,4.57133698031032,4.54275536589721,0.611036183101898,0.124406970610093,0.252722758433675,4.62972082950243,0.520481771850815,0.459804208866946,0.720248519221397,1.05493372485001,2.78949646520444,2.3060469651273,1.68663104207512,8.53721123438752,0.215567992932842,0,0,0.219195732427575,0,0,0.411564272815887,1.79130840136644,0,0,0,0.414251545071004,1.87620847984877,1.44049649168812,3.07768156260773,4.13204886669548,2.93107514486019,4.41814495025775,3.48755421819505,5.60473643362414,3.62031669809657,3.77585167381919,3.56702762001765,4.38599962275997,3.07370161407471,3.35516046900929,1.05144974282064,0.92614151141356,0,0,0.426576501070468,0,0.38660238396628,0.605050573870028,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.379335801906163,1.48523066392647,1.1270773567308,1.62921062276251,3.87904974335251,2.73529697572242,2.33975187359752,3.54264355151045,1.56998727841375,3.82531208157582,0,0,0,0,0,0,0,0,0.486405680325106,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,4.0137647496948,5.50894926983355,0,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.876767573733936,0,5.14114106274891,7.66476460124651,1.95872164033981,1.14020871547503,0.494910368917606,0,0.242780636154981,0.906970670894253,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,1.45413491791002,1.06949213515416,0.948110273807448,1.05418608574999,0,1.70219802876894,0,0.258717367565509,0.214337035031592,0.532020700926821,0.535106452806212,1.48094118541909,0.304464949114599,0.23467170806371,0.42366414172764,0.661585194164886,0.16488625294148,0.322928853391811,0.422190474497091,0.119372344003136,0.492422699235184,0.291480836629851,3.52308073819968,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0.87345025498471,0.269728692769641,0.909188012978695,0.785267825952089,0.388844919875379,0,1.12738587736838,1.64468200648377,2.97825282822776,3.69457257853691,0.516639293910924,2.53434188236167,1.76035857968631,3.9061315453185,6.71099804324549,5.55643477899814,4.03242008761012,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0,0,2.31827512838629,0.375364950902364,0.183151624267265,0,3.51100472824754,2.82375921308533,1.38097570952153,1.71868654031819,1.71853182343688,0.685082519770642,0.755393897389701,2.02506750069542,0.900642406448441,0.906284817968409,0,0.103787347584177,0.399024873401031,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,1.33348036680969,2.26638562962784,1.28367683836726,1.01078884705519,0.50695859978048,1.50901073108861,0.842773567228942,0.640251524048693,1.66562859971278,2.38146845641537,1.50649623728312,1.35036454324594,2.47251540481984,1.61918812147837,0,0.70990322463735,0.715308569841963,0.872078499793971,0.752875043322645,0.846146078916765,0.548783918618318,1.31534855718921,1.49384525230448,1.12228454331548,0.474540072496697,0.788035859004508,0.818462086339379,0.77468420592983,1.15743966588685,1.74867404556562,1.63752125911786,0.214871054048298,1.91288332068843,0.882365676478062,0.927471342481686
|short_description=p4@Slc4a3
|short_description=p4@Slc4a3
}}
}}

Latest revision as of 15:36, 1 October 2015

Short description:p4@Slc4a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Slc4a3_5end
Coexpression cluster:NA
Association with transcript: -170bp_to_ENSMUST00000113545, ENSMUST00000124341, NM_009208, uc007bpv.2_5end
EntrezGene:Slc4a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Slc4a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D725.38
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I311.18
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D52.34
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.49e-0723
neuroblast (sensu Vertebrata)4.49e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.03e-1892
compound organ8.34e-1243
regional part of nervous system4.20e-0954
neurectoderm9.25e-0964
neural plate9.25e-0964
presumptive neural plate9.25e-0964
posterior neural tube1.49e-0812
chordal neural plate1.49e-0812
central nervous system4.03e-0873
neural tube4.22e-0852
neural rod4.22e-0852
future spinal cord4.22e-0852
neural keel4.22e-0852
cavitated compound organ5.45e-0821
adrenal gland1.05e-077
adrenal/interrenal gland1.05e-077
nervous system1.35e-0775
gonad1.45e-0718
gonad primordium1.45e-0718
primary circulatory organ3.51e-0718
heart3.51e-0718
primitive heart tube3.51e-0718
primary heart field3.51e-0718
anterior lateral plate mesoderm3.51e-0718
heart tube3.51e-0718
heart primordium3.51e-0718
cardiac mesoderm3.51e-0718
cardiogenic plate3.51e-0718
heart rudiment3.51e-0718
external genitalia3.76e-0717
indifferent external genitalia3.76e-0717
indifferent gonad3.76e-0717
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