FFCP PHASE1:Mm9::chr13:44936106..44936121,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:44936106..44936121,+
|short_description=p13@Jarid2
|description=CAGE_peak_13_at_Jarid2_5end
|association_with_transcript=-23bp_to_uc007qgv.1_5end
|Entrez...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16468 | |EntrezGene=16468 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1346 | |||
|TSSclassifier=NA | |||
|UniProt=Q62315 | |UniProt=Q62315 | ||
|association_with_transcript=-23bp_to_uc007qgv.1_5end | |||
|cluster_id=chr13:44936106..44936121,+ | |||
|description=CAGE_peak_13_at_Jarid2_5end | |||
|id=chr13:44936106..44936121,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.04e-24!33;CL:0000047!3.04e-24!33;CL:0000031!3.04e-24!33;CL:0000404!3.04e-24!33;CL:0000393!1.82e-18!39;CL:0000211!1.82e-18!39;CL:0000221!1.45e-17!44;CL:0000133!1.45e-17!44;CL:0000117!1.94e-17!23;CL:0000337!1.94e-17!23;CL:0002319!2.30e-17!43;CL:0000055!3.94e-13!50;CL:0000107!5.37e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-35,33;CL:0000047,2.05e-35,33;CL:0000031,2.05e-35,33;CL:0000404,2.05e-35,33;CL:0000393,4.10e-29,39;CL:0000211,4.10e-29,39;CL:0002319,6.86e-26,43;CL:0000221,3.55e-25,44;CL:0000133,3.55e-25,44;CL:0000117,2.11e-24,23;CL:0000337,2.11e-24,23;CL:0002321,8.79e-14,70;CL:0000107,4.81e-13,9;CL:0002609,7.98e-10,6;CL:0000723,2.33e-09,91;CL:0000048,2.33e-09,91;CL:0002613,8.57e-09,3;CL:0000034,1.87e-08,97;CL:0002608,3.76e-08,3;CL:0002612,6.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.45e-34!73;UBERON:0005743!3.45e-34!73;UBERON:0000073!1.32e-33!75;UBERON:0001016!1.32e-33!75;UBERON:0004121!7.31e-31!102;UBERON:0000924!7.31e-31!102;UBERON:0006601!7.31e-31!102;UBERON:0002346!4.43e-30!71;UBERON:0003075!4.43e-30!71;UBERON:0007284!4.43e-30!71;UBERON:0001049!4.69e-25!52;UBERON:0005068!4.69e-25!52;UBERON:0006241!4.69e-25!52;UBERON:0007135!4.69e-25!52;UBERON:0000033!1.95e-23!63;UBERON:0000955!3.16e-22!50;UBERON:0006238!3.16e-22!50;UBERON:0002616!2.58e-21!49;UBERON:0003056!7.49e-21!49;UBERON:0002020!2.53e-18!34;UBERON:0003080!6.01e-18!40;UBERON:0002780!3.89e-17!39;UBERON:0001890!3.89e-17!39;UBERON:0006240!3.89e-17!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0007811!1.46e-13!86;UBERON:0000153!5.75e-11!94;UBERON:0002410!5.37e-09!9;UBERON:0000956!6.48e-09!21;UBERON:0001869!6.48e-09!21;UBERON:0000203!6.48e-09!21;UBERON:0000010!8.90e-08!11;UBERON:0003076!1.04e-07!12;UBERON:0003057!1.04e-07!12;UBERON:0002420!2.62e-07!8;UBERON:0007245!2.62e-07!8;UBERON:0010009!2.62e-07!8;UBERON:0010011!2.62e-07!8;UBERON:0000454!2.62e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.30e-37,73;UBERON:0001016,1.23e-35,75;UBERON:0004121,1.25e-26,95;UBERON:0000924,1.25e-26,95;UBERON:0006601,1.25e-26,95;UBERON:0000073,5.28e-22,54;UBERON:0001049,8.51e-21,52;UBERON:0005068,8.51e-21,52;UBERON:0006241,8.51e-21,52;UBERON:0007135,8.51e-21,52;UBERON:0002346,2.51e-19,64;UBERON:0003075,2.51e-19,64;UBERON:0007284,2.51e-19,64;UBERON:0002020,6.42e-19,34;UBERON:0010371,3.27e-16,73;UBERON:0000955,9.85e-16,47;UBERON:0006238,9.85e-16,47;UBERON:0002616,2.71e-14,46;UBERON:0003528,2.03e-13,29;UBERON:0002791,2.03e-13,29;UBERON:0001893,2.03e-13,29;UBERON:0002410,4.81e-13,9;UBERON:0003080,7.19e-12,40;UBERON:0010314,1.20e-11,92;UBERON:0003076,7.94e-11,12;UBERON:0003057,7.94e-11,12;UBERON:0002780,1.26e-10,39;UBERON:0001890,1.26e-10,39;UBERON:0006240,1.26e-10,39;UBERON:0000010,1.80e-10,11;UBERON:0002240,1.67e-09,6;UBERON:0005174,1.67e-09,6;UBERON:0001137,1.67e-09,6;UBERON:0000956,2.12e-09,21;UBERON:0001869,2.12e-09,21;UBERON:0000203,2.12e-09,21;UBERON:0011216,2.79e-09,194;UBERON:0003056,4.98e-09,49;UBERON:0000369,1.29e-08,5;UBERON:0002435,1.29e-08,5;UBERON:0000204,1.29e-08,5;UBERON:0010082,1.29e-08,5;UBERON:0000013,1.52e-08,3;UBERON:0002257,6.88e-08,3;UBERON:0001948,1.21e-07,5;UBERON:0002315,1.21e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,0.633831403506179,0,0,0,0,0,0,0,1.45165457231869,0.675029691658453,1.47227472945967,0.571301968807607,1.10434270475807,1.5923803897944,3.35459148563827,1.83843757322004,0,2.042997409363,1.99688493233117,3.42904348098504,4.20843160571084,2.08365348222704,0.837548997004143,0.56276261003168,0.61119299110724,1.17851434189467,1.70846016958924,4.47358669980721,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,1.64769703345305,0.915001205637253,1.63350657746724,1.73824320192276,1.79000820131231,1.45451631191692,0.973447578406546,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.640568601424249,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0.928946687441754,0.38660238396628,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0.94652465824877,1.56175497718655,2.80050417052639,0.955875191810208,1.55959071857676,2.26461224631066,2.02405350837447,2.92255857911312,2.76701444562566,2.24924921495265,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.643011105094777,0.354680467284547,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,1.37016503954128,2.2661816921691,0,1.80128481289688,0.453142408984205,0.51776031175182,1.3492355185943,0,0.853668028770671,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.640251524048693,0.402048282689293,0,0.347652977834566,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0.859484216193193,0.765153328275374,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,0.633831403506179,0,0,0,0,0,0,0,1.45165457231869,0.675029691658453,1.47227472945967,0.571301968807607,1.10434270475807,1.5923803897944,3.35459148563827,1.83843757322004,0,2.042997409363,1.99688493233117,3.42904348098504,4.20843160571084,2.08365348222704,0.837548997004143,0.56276261003168,0.61119299110724,1.17851434189467,1.70846016958924,4.47358669980721,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,1.64769703345305,0.915001205637253,1.63350657746724,1.73824320192276,1.79000820131231,1.45451631191692,0.973447578406546,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.640568601424249,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0.928946687441754,0.38660238396628,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.17211686592203,0,0,0.94652465824877,1.56175497718655,2.80050417052639,0.955875191810208,1.55959071857676,2.26461224631066,2.02405350837447,2.92255857911312,2.76701444562566,2.24924921495265,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.258717367565509,0.643011105094777,0.354680467284547,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.343706364687375,1.37016503954128,2.2661816921691,0,1.80128481289688,0.453142408984205,0.51776031175182,1.3492355185943,0,0.853668028770671,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.640251524048693,0.402048282689293,0,0.347652977834566,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0.859484216193193,0.765153328275374,0.220591419119515,0 | ||
|short_description=p13@Jarid2 | |||
}} | }} |
Latest revision as of 15:44, 1 October 2015
Short description: | p13@Jarid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Jarid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1346 |
Association with transcript: | -23bp_to_uc007qgv.1_5end |
EntrezGene: | Jarid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.05e-35 | 33 |
neuronal stem cell | 2.05e-35 | 33 |
neuroblast | 2.05e-35 | 33 |
electrically signaling cell | 2.05e-35 | 33 |
electrically responsive cell | 4.10e-29 | 39 |
electrically active cell | 4.10e-29 | 39 |
neural cell | 6.86e-26 | 43 |
ectodermal cell | 3.55e-25 | 44 |
neurectodermal cell | 3.55e-25 | 44 |
CNS neuron (sensu Vertebrata) | 2.11e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-24 | 23 |
embryonic cell | 8.79e-14 | 70 |
autonomic neuron | 4.81e-13 | 9 |
neuron of cerebral cortex | 7.98e-10 | 6 |
somatic stem cell | 2.33e-09 | 91 |
multi fate stem cell | 2.33e-09 | 91 |
striatum neuron | 8.57e-09 | 3 |
stem cell | 1.87e-08 | 97 |
hippocampal neuron | 3.76e-08 | 3 |
neuron of the ventral spinal cord | 6.88e-08 | 3 |