FFCP PHASE1:Mm9::chr16:16359109..16359133,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:16359109..16359133,- to FFCP PHASE1:Mm9::chr16:16359109..16359133,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74006 | |EntrezGene=74006 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1M6,E9PUD2 | |UniProt=Q8K1M6,E9PUD2 | ||
|association_with_transcript=0bp_to_ENSMUST00000023477,ENSMUST00000047122,ENSMUST00000096229,ENSMUST00000115749,NM_001025947,NM_152816,uc007yil.1,uc007yim.1,uc007yin.1,uc007yio.1_5end | |||
|cluster_id=chr16:16359109..16359133,- | |||
|description=CAGE_peak_3_at_Dnm1l_5end | |||
|id=chr16:16359109..16359133,- | |||
|ontology_enrichment_celltype=CL:0000117!7.88e-07!23;CL:0000337!7.88e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.51e-08,23;CL:0000337,8.51e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.19e-14!63;UBERON:0001049!2.08e-13!52;UBERON:0005068!2.08e-13!52;UBERON:0006241!2.08e-13!52;UBERON:0007135!2.08e-13!52;UBERON:0000955!6.76e-13!50;UBERON:0006238!6.76e-13!50;UBERON:0002616!2.23e-12!49;UBERON:0002346!2.82e-11!71;UBERON:0003075!2.82e-11!71;UBERON:0007284!2.82e-11!71;UBERON:0003056!5.83e-11!49;UBERON:0002020!1.58e-10!34;UBERON:0000073!3.64e-10!75;UBERON:0001016!3.64e-10!75;UBERON:0001017!4.11e-10!73;UBERON:0005743!4.11e-10!73;UBERON:0003080!7.26e-10!40;UBERON:0002780!2.57e-09!39;UBERON:0001890!2.57e-09!39;UBERON:0006240!2.57e-09!39;UBERON:0004121!5.89e-09!102;UBERON:0000924!5.89e-09!102;UBERON:0006601!5.89e-09!102;UBERON:0007811!8.63e-09!86;UBERON:0002791!2.74e-08!29;UBERON:0003528!2.74e-08!29;UBERON:0001893!2.74e-08!29;UBERON:0000153!2.82e-08!94;UBERON:0002021!7.34e-07!10;UBERON:0000411!7.34e-07!10;UBERON:0001950!7.34e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.74e-16,92;UBERON:0000073,6.50e-16,54;UBERON:0001049,2.03e-14,52;UBERON:0005068,2.03e-14,52;UBERON:0006241,2.03e-14,52;UBERON:0007135,2.03e-14,52;UBERON:0002346,9.01e-14,64;UBERON:0003075,9.01e-14,64;UBERON:0007284,9.01e-14,64;UBERON:0001017,2.93e-12,73;UBERON:0001016,5.99e-12,75;UBERON:0010371,7.45e-12,73;UBERON:0000955,8.47e-12,47;UBERON:0006238,8.47e-12,47;UBERON:0002020,1.27e-11,34;UBERON:0003056,2.28e-11,49;UBERON:0002616,3.07e-11,46;UBERON:0004121,4.37e-11,95;UBERON:0000924,4.37e-11,95;UBERON:0006601,4.37e-11,95;UBERON:0003080,2.42e-10,40;UBERON:0002780,9.96e-10,39;UBERON:0001890,9.96e-10,39;UBERON:0006240,9.96e-10,39;UBERON:0003528,4.62e-09,29;UBERON:0002791,4.62e-09,29;UBERON:0001893,4.62e-09,29;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10;UBERON:0000025,5.25e-07,114 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.513653904676515,0.159544317990673,0,0.0874204024189974,0,0,0,0.315462165358238,0.411343300817216,0.42438965179803,12.7564935226605,0.992909512008853,1.04479915655574,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,1.0470474879476,0.588231488031014,0,0,0.251793635951155,0.506884656097573,0,0.782391344348039,0,0.659058548203415,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.85960031981627,0.515672092277442,2.22548106945558,3.1739458756322,3.80298842103708,0,0.889294796111139,0,0,0,0.299600110518405,0,1.14058573539325,0.405017814995072,0.630974884054146,2.28520787523043,3.09215957332259,1.34739879136449,1.24599112323707,0,15.4162233399144,8.93811366596314,9.5236050618871,2.2420668914133,3.20206752608434,2.6045668527838,8.09630697104005,5.6276261003168,6.26472815884921,7.66034322231536,6.69146899755784,3.16879057903011,1.4387976733305,0.982430281388212,0.869593466105033,0,0,0,0.649776417447669,0,2.24711072210803,0.511290967734173,0.259786004602869,0.35333957451034,1.83096445709685,0,2.54805239706646,0,0.216491041011214,0.506719730950197,0.505524445014783,3.88225191044804,1.55362730188303,0.890652834388949,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,1.52865319276416,0.753999547978053,0.247194967734374,0.578397427679647,0.884610551949874,1.94120219936891,0.883366073841574,0,0,2.63502717310392,3.35114730901528,0,0.838705871541442,0,1.27070227073065,8.08869452786043,5.49000723382352,4.27224797183739,5.38855392596057,8.69432554923124,8.3115217823824,8.27430441645564,1.42575109390443,0.373220911830279,3.79084137650512,0.631325567659422,1.43132487258974,0.459804208866946,3.06105620669094,2.10986744970001,2.99360596265843,3.71529788826064,1.96773621575431,1.55222022443409,1.07783996466421,0.945530400839096,0.879755620819744,0.43839146485515,1.39023624612799,0.696504333044333,0.61734640922383,1.19420560091096,1.40442637462647,0.51469581422943,0.284163499395593,2.69263504296152,2.11073453982987,1.98068267607116,2.13070262026689,3.34499193970586,3.85667782218446,3.48800917125612,2.41446061259657,4.08678698285093,2.30383789878873,1.64167464079095,2.51313309592153,2.19299981137998,3.51280184465681,1.74468344388483,4.41608891984667,4.93942139420565,0.330418782983798,0.264450566663544,0.639864751605702,0.928946687441754,1.15980715189884,1.21010114774006,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0.779856348476481,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,1.25673363870702,1.1270773567308,1.01825663922657,2.52138233317913,1.75339549725796,1.20149420536089,1.18088118383682,0.941992367048249,0.246794327843601,0,1.00107063429656,0.196558995113203,0.224862112384854,0.202860121388503,1.4470629585145,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,1.10851914099963,1.13694847062291,1.30371981153621,1.86719594352707,1.40814148973101,0.837531287209079,0.714130922658041,0.585400943573396,1.41871629695572,1.10732344824387,1.11618338060241,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,1.65562047782839,7.06422595946285,7.03270119553219,0.327869890753351,1.51482556322624,0,0.390438744296638,0.646270193198397,0,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,5.46246237917072,0.283880170416537,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,1.209294227859,0.565815239267694,0.295301892880773,1.22974059177571,1.03371317267288,2.18120237686503,1.06949213515416,0.316036757935816,1.05418608574999,0,2.04263763452273,2.52085531643834,0.517434735131018,1.50035924522115,1.06404140185364,1.42695054081656,1.15184314421485,0.913394847343798,1.17335854031855,0.847328283455281,0.661585194164886,0.8244312647074,0.484393280087717,0.663442174209714,1.3130957840345,0.492422699235184,0.874442509889552,6.67531087237835,0.683483523191411,1.03193433981611,0.740778109478847,0.941842285023455,1.0935538217682,0,0.849892149969277,0.979660166265606,0.690999869022119,0.954670618015114,1.10717597753397,1.42323626988794,0.86404272657441,0.418176592028937,0.436725127492355,1.34864346384821,0.909188012978695,1.30877970992015,1.03691978633434,0.621339313086926,88.4997913734179,1.04661582230785,0.330916980914195,0.388902376688095,0.774958940866387,1.18269287843545,1.05621514781179,1.69265700297135,1.99232754408851,9.18019659138823,41.4763209011326,0.316011120628178,1.82452693761148,0.821687657318618,0.77952493786677,1.43221356533985,1.78813219303138,1.32214994471966,0.738447635872886,0.706765149637033,0.990688486514998,0.907435666231565,1.26695244961678,0.673482891482306,1.16876902181569,1.36038230169127,0.887943813496259,0.62799699626633,1.17519231454855,0.772758376128762,0.563047426353546,1.28206136987086,0.428736758158132,0.501572104035363,3.95326289831947,4.14292712856459,7.44764167471216,6.35856774671644,6.85082519770642,6.0431511791176,7.42524750254986,6.30449684513909,3.62513927187364,3.62432218226274,1.97195960409936,0.798049746802062,1.36586884603307,1.70174701947806,1.67690530102386,2.02227859295016,2.66696073361938,2.88449080134452,2.24643446714271,1.51618327058278,2.78827229879264,2.07488975524684,2.24739617927718,2.04880487695582,2.5845961030026,2.85776214769844,2.89710814862139,3.08654752741928,0.412085900803307,1.76638704161277,2.05721551431249,1.95223386775271,1.66905332963125,1.88950341622027,2.07040636913727,2.28459441307527,2.37806364734604,2.10455769150274,1.49384525230448,1.12228454331548,2.37270036248348,1.97008964751127,1.63692417267876,2.47898945897546,1.73615949883027,1.74867404556562,1.87145286756327,2.36358159453128,2.29545998482612,1.10295709559758,1.62307484934295 | |phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.513653904676515,0.159544317990673,0,0.0874204024189974,0,0,0,0.315462165358238,0.411343300817216,0.42438965179803,12.7564935226605,0.992909512008853,1.04479915655574,0,0.22940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,1.0470474879476,0.588231488031014,0,0,0.251793635951155,0.506884656097573,0,0.782391344348039,0,0.659058548203415,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.85960031981627,0.515672092277442,2.22548106945558,3.1739458756322,3.80298842103708,0,0.889294796111139,0,0,0,0.299600110518405,0,1.14058573539325,0.405017814995072,0.630974884054146,2.28520787523043,3.09215957332259,1.34739879136449,1.24599112323707,0,15.4162233399144,8.93811366596314,9.5236050618871,2.2420668914133,3.20206752608434,2.6045668527838,8.09630697104005,5.6276261003168,6.26472815884921,7.66034322231536,6.69146899755784,3.16879057903011,1.4387976733305,0.982430281388212,0.869593466105033,0,0,0,0.649776417447669,0,2.24711072210803,0.511290967734173,0.259786004602869,0.35333957451034,1.83096445709685,0,2.54805239706646,0,0.216491041011214,0.506719730950197,0.505524445014783,3.88225191044804,1.55362730188303,0.890652834388949,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,1.52865319276416,0.753999547978053,0.247194967734374,0.578397427679647,0.884610551949874,1.94120219936891,0.883366073841574,0,0,2.63502717310392,3.35114730901528,0,0.838705871541442,0,1.27070227073065,8.08869452786043,5.49000723382352,4.27224797183739,5.38855392596057,8.69432554923124,8.3115217823824,8.27430441645564,1.42575109390443,0.373220911830279,3.79084137650512,0.631325567659422,1.43132487258974,0.459804208866946,3.06105620669094,2.10986744970001,2.99360596265843,3.71529788826064,1.96773621575431,1.55222022443409,1.07783996466421,0.945530400839096,0.879755620819744,0.43839146485515,1.39023624612799,0.696504333044333,0.61734640922383,1.19420560091096,1.40442637462647,0.51469581422943,0.284163499395593,2.69263504296152,2.11073453982987,1.98068267607116,2.13070262026689,3.34499193970586,3.85667782218446,3.48800917125612,2.41446061259657,4.08678698285093,2.30383789878873,1.64167464079095,2.51313309592153,2.19299981137998,3.51280184465681,1.74468344388483,4.41608891984667,4.93942139420565,0.330418782983798,0.264450566663544,0.639864751605702,0.928946687441754,1.15980715189884,1.21010114774006,0.444756087689741,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0.779856348476481,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,1.25673363870702,1.1270773567308,1.01825663922657,2.52138233317913,1.75339549725796,1.20149420536089,1.18088118383682,0.941992367048249,0.246794327843601,0,1.00107063429656,0.196558995113203,0.224862112384854,0.202860121388503,1.4470629585145,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,1.10851914099963,1.13694847062291,1.30371981153621,1.86719594352707,1.40814148973101,0.837531287209079,0.714130922658041,0.585400943573396,1.41871629695572,1.10732344824387,1.11618338060241,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,1.65562047782839,7.06422595946285,7.03270119553219,0.327869890753351,1.51482556322624,0,0.390438744296638,0.646270193198397,0,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,5.46246237917072,0.283880170416537,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,1.209294227859,0.565815239267694,0.295301892880773,1.22974059177571,1.03371317267288,2.18120237686503,1.06949213515416,0.316036757935816,1.05418608574999,0,2.04263763452273,2.52085531643834,0.517434735131018,1.50035924522115,1.06404140185364,1.42695054081656,1.15184314421485,0.913394847343798,1.17335854031855,0.847328283455281,0.661585194164886,0.8244312647074,0.484393280087717,0.663442174209714,1.3130957840345,0.492422699235184,0.874442509889552,6.67531087237835,0.683483523191411,1.03193433981611,0.740778109478847,0.941842285023455,1.0935538217682,0,0.849892149969277,0.979660166265606,0.690999869022119,0.954670618015114,1.10717597753397,1.42323626988794,0.86404272657441,0.418176592028937,0.436725127492355,1.34864346384821,0.909188012978695,1.30877970992015,1.03691978633434,0.621339313086926,88.4997913734179,1.04661582230785,0.330916980914195,0.388902376688095,0.774958940866387,1.18269287843545,1.05621514781179,1.69265700297135,1.99232754408851,9.18019659138823,41.4763209011326,0.316011120628178,1.82452693761148,0.821687657318618,0.77952493786677,1.43221356533985,1.78813219303138,1.32214994471966,0.738447635872886,0.706765149637033,0.990688486514998,0.907435666231565,1.26695244961678,0.673482891482306,1.16876902181569,1.36038230169127,0.887943813496259,0.62799699626633,1.17519231454855,0.772758376128762,0.563047426353546,1.28206136987086,0.428736758158132,0.501572104035363,3.95326289831947,4.14292712856459,7.44764167471216,6.35856774671644,6.85082519770642,6.0431511791176,7.42524750254986,6.30449684513909,3.62513927187364,3.62432218226274,1.97195960409936,0.798049746802062,1.36586884603307,1.70174701947806,1.67690530102386,2.02227859295016,2.66696073361938,2.88449080134452,2.24643446714271,1.51618327058278,2.78827229879264,2.07488975524684,2.24739617927718,2.04880487695582,2.5845961030026,2.85776214769844,2.89710814862139,3.08654752741928,0.412085900803307,1.76638704161277,2.05721551431249,1.95223386775271,1.66905332963125,1.88950341622027,2.07040636913727,2.28459441307527,2.37806364734604,2.10455769150274,1.49384525230448,1.12228454331548,2.37270036248348,1.97008964751127,1.63692417267876,2.47898945897546,1.73615949883027,1.74867404556562,1.87145286756327,2.36358159453128,2.29545998482612,1.10295709559758,1.62307484934295 | ||
|short_description=p3@Dnm1l | |||
}} | }} |
Latest revision as of 16:08, 1 October 2015
Short description: | p3@Dnm1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dnm1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000023477, ENSMUST00000047122, ENSMUST00000096229, ENSMUST00000115749, NM_001025947, NM_152816, uc007yil.1, uc007yim.1, uc007yin.1, uc007yio.1_5end |
EntrezGene: | Dnm1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.51e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.51e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.74e-16 | 92 |
regional part of nervous system | 6.50e-16 | 54 |
neural tube | 2.03e-14 | 52 |
neural rod | 2.03e-14 | 52 |
future spinal cord | 2.03e-14 | 52 |
neural keel | 2.03e-14 | 52 |
neurectoderm | 9.01e-14 | 64 |
neural plate | 9.01e-14 | 64 |
presumptive neural plate | 9.01e-14 | 64 |
central nervous system | 2.93e-12 | 73 |
nervous system | 5.99e-12 | 75 |
ecto-epithelium | 7.45e-12 | 73 |
brain | 8.47e-12 | 47 |
future brain | 8.47e-12 | 47 |
gray matter | 1.27e-11 | 34 |
pre-chordal neural plate | 2.28e-11 | 49 |
regional part of brain | 3.07e-11 | 46 |
ectoderm-derived structure | 4.37e-11 | 95 |
ectoderm | 4.37e-11 | 95 |
presumptive ectoderm | 4.37e-11 | 95 |
anterior neural tube | 2.42e-10 | 40 |
regional part of forebrain | 9.96e-10 | 39 |
forebrain | 9.96e-10 | 39 |
future forebrain | 9.96e-10 | 39 |
brain grey matter | 4.62e-09 | 29 |
regional part of telencephalon | 4.62e-09 | 29 |
telencephalon | 4.62e-09 | 29 |
occipital lobe | 1.10e-07 | 10 |
visual cortex | 1.10e-07 | 10 |
neocortex | 1.10e-07 | 10 |
tube | 5.25e-07 | 114 |