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FFCP PHASE1:Mm9::chr3:136333182..136333193,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19055
|EntrezGene=19055
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P63328
|UniProt=P63328
|association_with_transcript=94bp_to_ENSMUST00000070198,ENSMUST00000124206_5end
|association_with_transcript=94bp_to_ENSMUST00000070198,ENSMUST00000124206_5end
|cluster_id=chr3:136333182..136333193,+
|description=CAGE_peak_9_at_Ppp3ca_5end
|description=CAGE_peak_9_at_Ppp3ca_5end
|id=chr3:136333182..136333193,+
|id=chr3:136333182..136333193,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.36e-11!52;UBERON:0005068!1.36e-11!52;UBERON:0006241!1.36e-11!52;UBERON:0007135!1.36e-11!52;UBERON:0000033!2.79e-11!63;UBERON:0002020!4.81e-10!34;UBERON:0002346!6.14e-10!71;UBERON:0003075!6.14e-10!71;UBERON:0007284!6.14e-10!71;UBERON:0003056!6.90e-10!49;UBERON:0000955!1.87e-09!50;UBERON:0006238!1.87e-09!50;UBERON:0002616!4.39e-09!49;UBERON:0003080!3.63e-08!40;UBERON:0002021!4.14e-08!10;UBERON:0000411!4.14e-08!10;UBERON:0001950!4.14e-08!10;UBERON:0000073!5.23e-08!75;UBERON:0001016!5.23e-08!75;UBERON:0001017!6.25e-08!73;UBERON:0005743!6.25e-08!73;UBERON:0002780!1.07e-07!39;UBERON:0001890!1.07e-07!39;UBERON:0006240!1.07e-07!39;UBERON:0002791!1.24e-07!29;UBERON:0003528!1.24e-07!29;UBERON:0001893!1.24e-07!29;UBERON:0004121!1.81e-07!102;UBERON:0000924!1.81e-07!102;UBERON:0006601!1.81e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.51e-24,54;UBERON:0001049,8.42e-24,52;UBERON:0005068,8.42e-24,52;UBERON:0006241,8.42e-24,52;UBERON:0007135,8.42e-24,52;UBERON:0002346,1.41e-21,64;UBERON:0003075,1.41e-21,64;UBERON:0007284,1.41e-21,64;UBERON:0002020,1.61e-21,34;UBERON:0000955,3.74e-18,47;UBERON:0006238,3.74e-18,47;UBERON:0001017,6.26e-18,73;UBERON:0010371,1.16e-17,73;UBERON:0002616,2.59e-17,46;UBERON:0001016,3.51e-17,75;UBERON:0002021,1.14e-16,10;UBERON:0000411,1.14e-16,10;UBERON:0001950,1.14e-16,10;UBERON:0003528,6.23e-16,29;UBERON:0002791,6.23e-16,29;UBERON:0001893,6.23e-16,29;UBERON:0003080,2.77e-14,40;UBERON:0004121,3.03e-14,95;UBERON:0000924,3.03e-14,95;UBERON:0006601,3.03e-14,95;UBERON:0003056,5.90e-14,49;UBERON:0002780,2.84e-13,39;UBERON:0001890,2.84e-13,39;UBERON:0006240,2.84e-13,39;UBERON:0010314,7.47e-13,92;UBERON:0002619,2.31e-12,17;UBERON:0000956,2.92e-11,21;UBERON:0001869,2.92e-11,21;UBERON:0000203,2.92e-11,21;UBERON:0003076,5.48e-11,12;UBERON:0003057,5.48e-11,12;UBERON:0002240,9.57e-09,6;UBERON:0005174,9.57e-09,6;UBERON:0001137,9.57e-09,6;UBERON:0001948,2.20e-07,5;UBERON:0002315,2.20e-07,5;UBERON:0000025,3.60e-07,114;UBERON:0004111,9.15e-07,122
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0,0.503637815735669,0.233612640595526,0.129123323441576,0.422366166455,0,0.171217968225505,0,0,0.174840804837995,0.333109761815663,0.607425802169478,0,2.05050407482854,1.50825876966313,1.69755860719212,1.36069264241712,0.695036658406197,0,0,0.45881856213434,0,0.86152399231815,0.430942465371778,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0.577703239502549,0,0.408338712524738,0,0,1.0470474879476,0.588231488031014,1.36609096991689,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0.139986421625363,0,1.67782606057736,0,0,1.28629718017973,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,3.14216082844184,3.53389665522582,0.244981598429908,0.0958454710182364,0.919218786610021,0,2.55374676170375,2.76491759861238,0.527545150920775,1.09785172322892,0.52091337055676,1.3959149950069,2.25105044012672,1.68078072554491,1.47314292736834,1.99320353118744,1.3047961207771,0.302904773332736,0.529000920747499,0.579728977403356,0.860423876981386,0,0,0,0,0.702222100658759,1.02258193546835,1.29893002301434,1.06001872353102,0.281686839553361,2.56652954828636,2.54805239706646,0,1.29894624606728,0.760079596425296,0,0.79928715803342,0.776813650941515,0.148442139064825,0,0,0,0,0.470354828542819,0,0.247194967734374,0.433798070759735,1.76922110389975,0.323533699894818,1.10420759230197,1.45462575940567,0,2.04946557908083,4.60782754989601,0,0.11981512450592,0,0.381210681219194,2.39665023047716,8.23501085073528,1.38219787324151,8.8650403298061,9.97290283588289,2.0778804455956,4.38051410282946,0.305518091550949,0.373220911830279,0.252722758433675,1.47309299120532,0.390361328888111,0.229902104433473,0.900310649026746,0.30140963567143,0.816437989815934,0.896796041993948,1.78033276663485,1.03481348295606,0,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0,0.205782136407943,0.199034266818493,0,1.28673953557358,0.284163499395593,0.207125772535502,0,0,0.710234206755631,0.393528463494808,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0.268412837520744,11.3556572224629,1.02904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.80673409849337,0.444756087689741,0.951128130562796,0.474529061544512,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.442830443938806,0,0,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,0,0,0.624075346229121,0.505157755894224,0.179397413521912,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.433947175744535,1.50791283939272,0,0.491764273019036,0.275936746304732,2.24770825982909,1.52375192569864,0.163934945376675,3.28212205365685,0.631016438832513,0,0.646270193198397,0,0.668396022247182,0,0,0.292255857911312,0,1.28528526568723,0,0,0.488660878060728,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,1.53717573971964,0.258428293168221,0,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.658196082408484,0.608929898229199,0.704015124191131,0,0.882113592219848,0.32977250588296,0.322928853391811,0.301564624640779,0.119372344003136,0.328281799490123,0.291480836629851,3.33765543618917,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.69975726161829,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.404593039154462,0.578574190077352,0.523511883968059,0,0.621339313086926,0.56369293868419,0.299033092087958,0,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.2604087696879,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0.192423683280659,0,0.906921534460845,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.857473516316263,2.00628841614145,5.0827665835536,6.90487854760765,4.01026859407578,5.15559547031063,10.9613203163303,15.107877947794,7.42524750254986,6.75481804836331,8.15656336171568,5.1776031175182,0.31136204275253,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.576226371643824,0.459483751644906,0,0.695305955669133,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.581385666529314,0,0.423073039458382,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0.467863216890817,0,0.765153328275374,0.882365676478062,0.695603506861264
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0,0.503637815735669,0.233612640595526,0.129123323441576,0.422366166455,0,0.171217968225505,0,0,0.174840804837995,0.333109761815663,0.607425802169478,0,2.05050407482854,1.50825876966313,1.69755860719212,1.36069264241712,0.695036658406197,0,0,0.45881856213434,0,0.86152399231815,0.430942465371778,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0.577703239502549,0,0.408338712524738,0,0,1.0470474879476,0.588231488031014,1.36609096991689,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0,0.139986421625363,0,1.67782606057736,0,0,1.28629718017973,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,3.14216082844184,3.53389665522582,0.244981598429908,0.0958454710182364,0.919218786610021,0,2.55374676170375,2.76491759861238,0.527545150920775,1.09785172322892,0.52091337055676,1.3959149950069,2.25105044012672,1.68078072554491,1.47314292736834,1.99320353118744,1.3047961207771,0.302904773332736,0.529000920747499,0.579728977403356,0.860423876981386,0,0,0,0,0.702222100658759,1.02258193546835,1.29893002301434,1.06001872353102,0.281686839553361,2.56652954828636,2.54805239706646,0,1.29894624606728,0.760079596425296,0,0.79928715803342,0.776813650941515,0.148442139064825,0,0,0,0,0.470354828542819,0,0.247194967734374,0.433798070759735,1.76922110389975,0.323533699894818,1.10420759230197,1.45462575940567,0,2.04946557908083,4.60782754989601,0,0.11981512450592,0,0.381210681219194,2.39665023047716,8.23501085073528,1.38219787324151,8.8650403298061,9.97290283588289,2.0778804455956,4.38051410282946,0.305518091550949,0.373220911830279,0.252722758433675,1.47309299120532,0.390361328888111,0.229902104433473,0.900310649026746,0.30140963567143,0.816437989815934,0.896796041993948,1.78033276663485,1.03481348295606,0,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0,0.205782136407943,0.199034266818493,0,1.28673953557358,0.284163499395593,0.207125772535502,0,0,0.710234206755631,0.393528463494808,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0.268412837520744,11.3556572224629,1.02904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.80673409849337,0.444756087689741,0.951128130562796,0.474529061544512,0.329397909448022,0.754005626400808,0.198956472041151,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0.571242563048644,0,0.407302655690628,0.193952487167626,0.210407459670956,0.126473074248515,0.442830443938806,0,0,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,0,0,0.624075346229121,0.505157755894224,0.179397413521912,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.433947175744535,1.50791283939272,0,0.491764273019036,0.275936746304732,2.24770825982909,1.52375192569864,0.163934945376675,3.28212205365685,0.631016438832513,0,0.646270193198397,0,0.668396022247182,0,0,0.292255857911312,0,1.28528526568723,0,0,0.488660878060728,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,1.53717573971964,0.258428293168221,0,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.658196082408484,0.608929898229199,0.704015124191131,0,0.882113592219848,0.32977250588296,0.322928853391811,0.301564624640779,0.119372344003136,0.328281799490123,0.291480836629851,3.33765543618917,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.69975726161829,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.209088296014469,0,0.404593039154462,0.578574190077352,0.523511883968059,0,0.621339313086926,0.56369293868419,0.299033092087958,0,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.2604087696879,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0.192423683280659,0,0.906921534460845,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.857473516316263,2.00628841614145,5.0827665835536,6.90487854760765,4.01026859407578,5.15559547031063,10.9613203163303,15.107877947794,7.42524750254986,6.75481804836331,8.15656336171568,5.1776031175182,0.31136204275253,0,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.576226371643824,0.459483751644906,0,0.695305955669133,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.581385666529314,0,0.423073039458382,0.548783918618318,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.197008964751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|short_description=p9@Ppp3ca
|short_description=p9@Ppp3ca
}}
}}

Latest revision as of 16:15, 1 October 2015

Short description:p9@Ppp3ca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Ppp3ca_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 94bp_to_ENSMUST00000070198, ENSMUST00000124206_5end
EntrezGene:Ppp3ca
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Ppp3ca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.51e-2454
neural tube8.42e-2452
neural rod8.42e-2452
future spinal cord8.42e-2452
neural keel8.42e-2452
neurectoderm1.41e-2164
neural plate1.41e-2164
presumptive neural plate1.41e-2164
gray matter1.61e-2134
brain3.74e-1847
future brain3.74e-1847
central nervous system6.26e-1873
ecto-epithelium1.16e-1773
regional part of brain2.59e-1746
nervous system3.51e-1775
occipital lobe1.14e-1610
visual cortex1.14e-1610
neocortex1.14e-1610
brain grey matter6.23e-1629
regional part of telencephalon6.23e-1629
telencephalon6.23e-1629
anterior neural tube2.77e-1440
ectoderm-derived structure3.03e-1495
ectoderm3.03e-1495
presumptive ectoderm3.03e-1495
pre-chordal neural plate5.90e-1449
regional part of forebrain2.84e-1339
forebrain2.84e-1339
future forebrain2.84e-1339
structure with developmental contribution from neural crest7.47e-1392
regional part of cerebral cortex2.31e-1217
cerebral cortex2.92e-1121
cerebral hemisphere2.92e-1121
pallium2.92e-1121
posterior neural tube5.48e-1112
chordal neural plate5.48e-1112
spinal cord9.57e-096
dorsal region element9.57e-096
dorsum9.57e-096
regional part of spinal cord2.20e-075
gray matter of spinal cord2.20e-075
tube3.60e-07114
anatomical conduit9.15e-07122
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