FFCP PHASE1:Mm9::chr8:125091921..125091960,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:125091921..125091960,+ to FFCP PHASE1:Mm9::chr8:125091921..125091960,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67177 | |EntrezGene=67177 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=151 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009nte.1_5end | |||
|cluster_id=chr8:125091921..125091960,+ | |||
|description=CAGE_peak_1_at_Cdt1_5end | |||
|id=chr8:125091921..125091960,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.56e-11!32;CL:0002032!1.56e-11!32;CL:0000037!1.56e-11!32;CL:0000566!1.56e-11!32;CL:0000837!1.56e-11!32;CL:0002031!2.30e-08!25;CL:0000049!3.02e-08!19;CL:0002320!3.36e-07!46;CL:0000134!3.36e-07!46;CL:0000763!9.34e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.55e-11,32;CL:0002032,1.55e-11,32;CL:0000037,1.55e-11,32;CL:0000837,1.55e-11,32;CL:0002031,2.30e-08,25;CL:0000049,3.02e-08,19;CL:0002320,3.29e-07,46;CL:0000134,3.29e-07,46;CL:0000763,9.33e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-14!45;UBERON:0003061!2.29e-14!45;UBERON:0002193!2.89e-14!48;UBERON:0002405!3.57e-12!70;UBERON:0004177!2.56e-09!29;UBERON:0003081!6.91e-08!88;UBERON:0005057!2.48e-07!51;UBERON:0002384!3.36e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.28e-14,45;UBERON:0003061,2.28e-14,45;UBERON:0002193,2.88e-14,48;UBERON:0002405,2.88e-14,48;UBERON:0004177,2.56e-09,29;UBERON:0005057,2.56e-09,29;UBERON:0003081,1.07e-07,87;UBERON:0002384,3.29e-07,46 | |||
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|phase1_expression=5.44506080156299,15.7038933437712,11.8299802241279,9.0739263392049,8.01433167914156,21.9921846204576,23.8284893407436,21.4344716913017,91.3718806764317,97.8389720025933,21.5734639964136,29.1966101922931,22.5984963509192,28.4990511885932,103.264026162855,83.4198101646083,147.607556285039,33.2812584452941,27.0115434203305,50.0779789121676,5.01755411891312,40.3121261875594,30.2991755401165,22.5589316138703,19.7291981717766,13.2073351746455,10.3382879078178,18.9614684763582,21.2826229791139,17.6421090831952,18.181901873735,135.261533446901,134.699188481021,95.0890086092632,44.7720010614476,51.6989747064911,53.6965406970031,12.1374172913703,17.9707129240474,15.1821885752402,7.64700934440319,8.19654581950135,13.1087795318411,6.29484089877886,4.76471576731718,4.03802854755699,15.6478268869608,16.3518867285335,6.81027166476863,4.47188767870852,8.25919887589639,10.062679505548,97.6494767256026,64.5572306390096,69.57141642249,4.88792928468299,7.16333599846892,1.54701627683233,7.28339259094552,6.34789175126439,10.1413024560989,9.4876468979357,14.2287167377782,39.1456377017409,56.3653826663175,46.8916875864426,28.16241038873,19.9793518767208,16.1755795201225,13.095576018174,15.984697062705,5.71301968807607,6.18431914664518,21.435889862617,20.4150853268843,18.3843757322004,0,0.893811366596314,0.614426133024974,4.87979264601717,3.38504281328916,4.68822033501084,0.558365998002762,1.68828783009504,1.06958773443767,6.48182888042069,4.55589378557129,4.10078780815661,13.5549886066399,16.92802946392,5.50742528533188,1.72084775396277,4.75979933595425,0.539703191637817,1.29955283489534,2.24013443548668,17.6959969366007,27.0984212899112,25.9786004602869,24.7337702157238,10.140726223921,8.98285341900225,10.1922095882658,7.11066703153331,27.4943622084242,26.0960661439352,30.8369911459018,13.9304333257253,31.3314839213078,4.60170631100957,41.8099637506387,29.8376168745898,23.753396217374,16.1273225391306,15.7568867561844,11.4356598110005,7.91023896749996,2.89198713839823,58.3842964286917,25.7209291416381,55.6520626520192,47.0328995541165,3.72783522436244,0.878342391034642,3.77004072264219,21.4583926375217,84.110217403156,46.7924130174858,76.3692064709119,1.04853447583376,0,4.52355667606312,0.347648640384553,0.255715457330331,0.83115217823824,0.648965052271031,28.3113431503879,31.9725914467939,0.758168275301024,0.631325567659422,39.1662533317738,29.8872735763515,36.0124259610698,27.4282768461001,34.0862860748153,21.5231050078548,19.3962569838639,1.29351685369508,63.3769899222556,41.6033376369202,32.5509579703305,33.7561427938465,27.5266776733342,25.4224081561182,18.108828003899,34.8309966932363,51.2615626738661,44.0064921166163,58.2535173760965,42.6679091423134,29.315757497637,31.1507366327556,41.1935839918266,29.1211062986158,23.7571353846563,19.5328513590343,20.3887785063711,8.17357396570186,22.5446994381468,6.895033491322,2.43206428637567,1.46199987425332,4.17145219052996,2.28150911892632,1.05144974282064,3.49875682089567,13.8775888853195,22.4782981664013,44.1506678607934,40.8736542474372,40.5932503164594,31.0592627919947,26.9077433052293,22.2563982551694,24.6755112003146,20.5873693405014,16.0854533632172,19.4977342600328,19.8863368861503,17.9763881730844,18.8040103390984,20.1132685986911,50.8309974554259,33.70331121987,30.4310886317317,23.0126000465205,20.5589636397683,17.393683332799,14.6076400757034,5.90440591918409,6.75094529717912,6.16985819609003,2.96452627087149,112.620446358363,95.9207896152431,108.158676057115,113.195947734785,94.5414466229474,56.5269390954752,58.4023159025146,56.0987884641622,40.9096505650241,17.2521847832825,26.0498663367952,20.9065240986756,22.7320990152401,13.9929982547091,6.27176577772377,6.46636165583116,39.0352308247199,41.7190339691586,37.5136639563166,28.6322102911973,18.5931945760415,12.8543566078447,4.87834119644497,12.2955412402829,12.1805579306826,7.49437412690189,3.93271955317771,6.73471429276993,4.48412081602686,30.1582567878545,27.1952841909355,18.1952781017043,9.3818493743609,0.80275294993896,0.820481806145422,24.9181116972547,3.02965112645248,39.7540356464483,40.996068151147,43.7309497397582,42.0585084396492,24.7306528231457,20.6645867475848,48.5772842009873,33.9016795177122,27.2748566783101,1.28528526568723,8.23252494207958,29.9150214160989,28.0165570088151,6.10389454998381,2.65490276679926,45.8855402332915,39.9067095193471,24.8958705277786,31.0066987524811,17.8312385807478,12.9214146584111,21.4484900391728,26.7373033788541,11.6933600436252,10.5418608574999,10.3135543248187,1.70219802876894,32.5910580196672,28.7176277997715,17.7899739076222,19.3300854670078,16.2315624017884,12.176627524557,14.6143175575008,40.1288620788945,9.95610733059955,2.20528398054962,13.6855589941428,18.2454802166373,17.8526257787341,12.4147237763262,8.69946768648825,20.6951394007194,0.741701208042039,98.9342399819567,49.9456220470998,55.1879691561741,125.26502390812,111.132407137193,95.4004982271199,40.7948231985253,40.4459697215372,43.3947917745891,6.68269432610579,52.9862789248402,36.59750408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| ||
|short_description=p1@Cdt1 | |||
}} | }} |
Latest revision as of 16:20, 1 October 2015
Short description: | p1@Cdt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:151 |
Association with transcript: | 0bp_to_uc009nte.1_5end |
EntrezGene: | Cdt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.55e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.55e-11 | 32 |
hematopoietic stem cell | 1.55e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.55e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 2.30e-08 | 25 |
common myeloid progenitor | 3.02e-08 | 19 |
connective tissue cell | 3.29e-07 | 46 |
mesenchymal cell | 3.29e-07 | 46 |
myeloid cell | 9.33e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.28e-14 | 45 |
blood island | 2.28e-14 | 45 |
hemolymphoid system | 2.88e-14 | 48 |
immune system | 2.88e-14 | 48 |
hemopoietic organ | 2.56e-09 | 29 |
immune organ | 2.56e-09 | 29 |
lateral plate mesoderm | 1.07e-07 | 87 |
connective tissue | 3.29e-07 | 46 |