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FFCP PHASE1:Mm9::chr5:114893964..114893987,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77697
|EntrezGene=77697
|HGNC=
|HGNC=
|MCL_coexpression_id=398
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=3bp_to_ENSMUST00000150519_5end
|association_with_transcript=3bp_to_ENSMUST00000150519_5end
|cluster_id=chr5:114893964..114893987,-
|description=CAGE_peak_3_at_Mmab_5end
|description=CAGE_peak_3_at_Mmab_5end
|id=chr5:114893964..114893987,-
|id=chr5:114893964..114893987,-
|ontology_enrichment_celltype=CL:0002319!4.74e-15!43;CL:0000221!7.28e-15!44;CL:0000133!7.28e-15!44;CL:0000055!2.06e-14!50;CL:0000393!4.18e-14!39;CL:0000211!4.18e-14!39;CL:0000540!5.17e-14!33;CL:0000047!5.17e-14!33;CL:0000031!5.17e-14!33;CL:0000404!5.17e-14!33;CL:0000117!8.17e-12!23;CL:0000337!8.17e-12!23
|ontology_enrichment_celltype_v019_2=CL:0002319,1.17e-17,43;CL:0000221,6.83e-17,44;CL:0000133,6.83e-17,44;CL:0000540,7.90e-16,33;CL:0000047,7.90e-16,33;CL:0000031,7.90e-16,33;CL:0000404,7.90e-16,33;CL:0000393,2.88e-15,39;CL:0000211,2.88e-15,39;CL:0000117,1.43e-13,23;CL:0000337,1.43e-13,23;CL:0002321,3.95e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.35e-22!73;UBERON:0005743!6.35e-22!73;UBERON:0000073!1.82e-20!75;UBERON:0001016!1.82e-20!75;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0002346!1.69e-16!71;UBERON:0003075!1.69e-16!71;UBERON:0007284!1.69e-16!71;UBERON:0001049!5.37e-14!52;UBERON:0005068!5.37e-14!52;UBERON:0006241!5.37e-14!52;UBERON:0007135!5.37e-14!52;UBERON:0000033!1.08e-13!63;UBERON:0003056!3.08e-13!49;UBERON:0002616!2.15e-12!49;UBERON:0000955!2.37e-12!50;UBERON:0006238!2.37e-12!50;UBERON:0002020!5.23e-12!34;UBERON:0003080!9.41e-11!40;UBERON:0000153!1.91e-10!94;UBERON:0002780!2.50e-10!39;UBERON:0001890!2.50e-10!39;UBERON:0006240!2.50e-10!39;UBERON:0007811!3.75e-09!86;UBERON:0002791!5.85e-09!29;UBERON:0003528!5.85e-09!29;UBERON:0001893!5.85e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.49e-24,73;UBERON:0001016,1.10e-22,75;UBERON:0004121,6.73e-20,95;UBERON:0000924,6.73e-20,95;UBERON:0006601,6.73e-20,95;UBERON:0002346,7.44e-20,64;UBERON:0003075,7.44e-20,64;UBERON:0007284,7.44e-20,64;UBERON:0000073,3.76e-17,54;UBERON:0010371,6.77e-16,73;UBERON:0001049,2.34e-15,52;UBERON:0005068,2.34e-15,52;UBERON:0006241,2.34e-15,52;UBERON:0007135,2.34e-15,52;UBERON:0003056,2.44e-15,49;UBERON:0002020,5.01e-14,34;UBERON:0010314,5.39e-13,92;UBERON:0003080,1.56e-12,40;UBERON:0002780,5.28e-12,39;UBERON:0001890,5.28e-12,39;UBERON:0006240,5.28e-12,39;UBERON:0002616,1.81e-11,46;UBERON:0000955,6.05e-11,47;UBERON:0006238,6.05e-11,47;UBERON:0003528,3.17e-10,29;UBERON:0002791,3.17e-10,29;UBERON:0001893,3.17e-10,29;UBERON:0000956,7.47e-07,21;UBERON:0001869,7.47e-07,21;UBERON:0000203,7.47e-07,21
|phase1_expression=2.40223270657191,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0.255129870453209,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0.523523743973798,0,0,0,1.38486499773135,0.811015449756117,1.65192076945513,3.12956537739216,3.05235218932625,1.09843091367236,2.52758868796568,3.63964696225943,2.87505128729943,0,0,0,1.02903774414379,2.0057340795713,0.515672092277442,5.05791152148994,8.99284664762456,10.1413024560989,1.0165335962074,3.55717918444456,0.899899717281399,0,0,0.299600110518405,3.45796474789399,1.34796496001021,2.56511282830212,0.420649922702764,6.56997264128748,6.40518768759679,0.979926393719632,1.62937300731002,1.83843757322004,6.60695285996332,2.80912143787413,2.76491759861238,5.80299666012853,5.94669683415663,2.6045668527838,1.67509799400829,2.8138130501584,4.12555268997387,6.18720029494702,4.8406371471695,4.84638559145781,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.779358013808606,1.41335829804136,0.845060518660083,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,1.01104889002957,0.11418387971906,0,0.593768556259299,1.21439728736295,0.913396434936424,0.230615497256059,0.904335843315735,0.352766121407114,0.879666139307728,0.247194967734374,0.289198713839823,0,1.29413479957927,0.441683036920787,0.969750506270444,0,0.292780797011547,0.628340120440365,0,0.239630249011841,0.599902730993408,0.635351135365324,2.24685959107234,0,1.7591609295801,1.39059456153821,1.53429274398198,2.0778804455956,1.1356888414743,1.2220723662038,0,0,0.631325567659422,2.08192708740326,2.75882525320168,1.44049703844279,2.41127708537144,1.83698547708585,1.5373646434182,1.96773621575431,1.29351685369508,1.72454394346274,3.21480336285293,3.51902248327898,2.6303487891309,1.94633074457919,1.0447564995665,0.411564272815887,1.59227413454795,0.702213187313235,0.51469581422943,0.284163499395593,1.65700618028402,1.64168241986767,1.62055855314913,1.89395788468168,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.68231958851302,1.3377599609307,0,0.793351699990633,2.13288250535234,1.62565670302307,1.03093969057675,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.754005626400808,0.397912944082302,0.38992817423824,0,0.216138049874694,0,2.0863469104839,1.02823661348756,1.1270773567308,1.83286195060783,0.775809948670503,0.98190147846446,1.01178459398812,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.589676985339609,0.674586337154561,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.324270453550071,0,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0,0.184753190166605,1.13694847062291,2.77040459951444,3.05541154395339,1.87752198630802,1.67506257441816,1.19021820443007,0.975668239288994,0.945810864637146,1.32878813789265,0.478364305972461,0,0.690739927463582,0,0,0.54390568381871,0,0,0.80275294993896,0.820481806145422,1.80328439914343,0,1.89304931649754,1.95219372148319,1.93881057959519,1.19484398976276,1.33679204449436,0.849229592366497,2.42886421004937,1.75353514746787,1.18586333383957,0.963963949265421,0.283880170416537,2.49291845134157,1.95464351224291,0.824850614862677,0,0.971122544619926,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,1.08036656418786,1.4229455216103,1.28602221018955,1.41872186913819,1.07021290561242,1.64549020602121,1.2178597964584,0.704015124191131,0.21183207086382,0,0,0.645857706783622,0.361877549568935,0.596861720015682,0.164140899745061,0,1.48340241608408,0.341741761595705,1.23832120777933,1.11116716421827,0.941842285023455,0.136694227721025,0,0,0.279902904647316,0.552799895217695,0,1.89801596148681,1.01659733563424,0.972048067396211,0.627264888043406,0.87345025498471,1.07891477107857,0.41326727862668,0,0,0,0,2.54178128274764,1.48912641411388,0.972255941720238,1.42075805825504,2.02747350588934,0.704143431874524,1.5624526181274,0.943734099831398,0.241584120826006,0,0.316011120628178,1.82452693761148,1.43795340030758,0.77952493786677,0.537080087002444,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.914481679859998,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0,0.443971906748129,0.179427713218951,0.335769232728157,0,0,0.183151624267265,0.643105137237198,0.501572104035363,1.6942555278512,5.06357760157895,3.43737308063638,2.40594455281163,0.685082519770642,1.5107877947794,2.70009000092722,3.60256962579376,3.17199686288943,1.55328093525546,2.38710899443606,1.19707462020309,2.04880326904961,1.94485373654635,2.72497111416377,0.919217542250071,0.222246727801615,0.618105171716683,1.28367683836726,1.51618327058278,0.50695859978048,0.3772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|phase1_expression=2.40223270657191,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0.255129870453209,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0.523523743973798,0,0,0,1.38486499773135,0.811015449756117,1.65192076945513,3.12956537739216,3.05235218932625,1.09843091367236,2.52758868796568,3.63964696225943,2.87505128729943,0,0,0,1.02903774414379,2.0057340795713,0.515672092277442,5.05791152148994,8.99284664762456,10.1413024560989,1.0165335962074,3.55717918444456,0.899899717281399,0,0,0.299600110518405,3.45796474789399,1.34796496001021,2.56511282830212,0.420649922702764,6.56997264128748,6.40518768759679,0.979926393719632,1.62937300731002,1.83843757322004,6.60695285996332,2.80912143787413,2.76491759861238,5.80299666012853,5.94669683415663,2.6045668527838,1.67509799400829,2.8138130501584,4.12555268997387,6.18720029494702,4.8406371471695,4.84638559145781,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.779358013808606,1.41335829804136,0.845060518660083,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,1.01104889002957,0.11418387971906,0,0.593768556259299,1.21439728736295,0.913396434936424,0.230615497256059,0.904335843315735,0.352766121407114,0.879666139307728,0.247194967734374,0.289198713839823,0,1.29413479957927,0.441683036920787,0.969750506270444,0,0.292780797011547,0.628340120440365,0,0.239630249011841,0.599902730993408,0.635351135365324,2.24685959107234,0,1.7591609295801,1.39059456153821,1.53429274398198,2.0778804455956,1.1356888414743,1.2220723662038,0,0,0.631325567659422,2.08192708740326,2.75882525320168,1.44049703844279,2.41127708537144,1.83698547708585,1.5373646434182,1.96773621575431,1.29351685369508,1.72454394346274,3.21480336285293,3.51902248327898,2.6303487891309,1.94633074457919,1.0447564995665,0.411564272815887,1.59227413454795,0.702213187313235,0.51469581422943,0.284163499395593,1.65700618028402,1.64168241986767,1.62055855314913,1.89395788468168,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.68231958851302,1.3377599609307,0,0.793351699990633,2.13288250535234,1.62565670302307,1.03093969057675,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.754005626400808,0.397912944082302,0.38992817423824,0,0.216138049874694,0,2.0863469104839,1.02823661348756,1.1270773567308,1.83286195060783,0.775809948670503,0.98190147846446,1.01178459398812,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.589676985339609,0.674586337154561,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.324270453550071,0,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0,0.184753190166605,1.13694847062291,2.77040459951444,3.05541154395339,1.87752198630802,1.67506257441816,1.19021820443007,0.975668239288994,0.945810864637146,1.32878813789265,0.478364305972461,0,0.690739927463582,0,0,0.54390568381871,0,0,0.80275294993896,0.820481806145422,1.80328439914343,0,1.89304931649754,1.95219372148319,1.93881057959519,1.19484398976276,1.33679204449436,0.849229592366497,2.42886421004937,1.75353514746787,1.18586333383957,0.963963949265421,0.283880170416537,2.49291845134157,1.95464351224291,0.824850614862677,0,0.971122544619926,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,1.08036656418786,1.4229455216103,1.28602221018955,1.41872186913819,1.07021290561242,1.64549020602121,1.2178597964584,0.704015124191131,0.21183207086382,0,0,0.645857706783622,0.361877549568935,0.596861720015682,0.164140899745061,0,1.48340241608408,0.341741761595705,1.23832120777933,1.11116716421827,0.941842285023455,0.136694227721025,0,0,0.279902904647316,0.552799895217695,0,1.89801596148681,1.01659733563424,0.972048067396211,0.627264888043406,0.87345025498471,1.07891477107857,0.41326727862668,0,0,0,0,2.54178128274764,1.48912641411388,0.972255941720238,1.42075805825504,2.02747350588934,0.704143431874524,1.5624526181274,0.943734099831398,0.241584120826006,0,0.316011120628178,1.82452693761148,1.43795340030758,0.77952493786677,0.537080087002444,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.914481679859998,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0,0.443971906748129,0.179427713218951,0.335769232728157,0,0,0.183151624267265,0.643105137237198,0.501572104035363,1.6942555278512,5.06357760157895,3.43737308063638,2.40594455281163,0.685082519770642,1.5107877947794,2.70009000092722,3.60256962579376,3.17199686288943,1.55328093525546,2.38710899443606,1.19707462020309,2.04880326904961,1.94485373654635,2.72497111416377,0.919217542250071,0.222246727801615,0.618105171716683,1.28367683836726,1.51618327058278,0.50695859978048,0.3772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|short_description=p3@Mmab
|short_description=p3@Mmab
}}
}}

Latest revision as of 16:35, 1 October 2015

Short description:p3@Mmab
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mmab_5end
Coexpression cluster:MCL_coexpression_mm9:398
Association with transcript: 3bp_to_ENSMUST00000150519_5end
EntrezGene:Mmab
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mmab

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.17e-1743
ectodermal cell6.83e-1744
neurectodermal cell6.83e-1744
neuron7.90e-1633
neuronal stem cell7.90e-1633
neuroblast7.90e-1633
electrically signaling cell7.90e-1633
electrically responsive cell2.88e-1539
electrically active cell2.88e-1539
CNS neuron (sensu Vertebrata)1.43e-1323
neuroblast (sensu Vertebrata)1.43e-1323
embryonic cell3.95e-1070

Uber anatomy
Ontology termp-valuen
central nervous system5.49e-2473
nervous system1.10e-2275
ectoderm-derived structure6.73e-2095
ectoderm6.73e-2095
presumptive ectoderm6.73e-2095
neurectoderm7.44e-2064
neural plate7.44e-2064
presumptive neural plate7.44e-2064
regional part of nervous system3.76e-1754
ecto-epithelium6.77e-1673
neural tube2.34e-1552
neural rod2.34e-1552
future spinal cord2.34e-1552
neural keel2.34e-1552
pre-chordal neural plate2.44e-1549
gray matter5.01e-1434
structure with developmental contribution from neural crest5.39e-1392
anterior neural tube1.56e-1240
regional part of forebrain5.28e-1239
forebrain5.28e-1239
future forebrain5.28e-1239
regional part of brain1.81e-1146
brain6.05e-1147
future brain6.05e-1147
brain grey matter3.17e-1029
regional part of telencephalon3.17e-1029
telencephalon3.17e-1029
cerebral cortex7.47e-0721
cerebral hemisphere7.47e-0721
pallium7.47e-0721
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