FFCP PHASE1:Mm9::chr5:114893964..114893987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77697 | |EntrezGene=77697 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENSMUST00000150519_5end | |association_with_transcript=3bp_to_ENSMUST00000150519_5end | ||
|cluster_id=chr5:114893964..114893987,- | |||
|description=CAGE_peak_3_at_Mmab_5end | |description=CAGE_peak_3_at_Mmab_5end | ||
|id=chr5:114893964..114893987,- | |id=chr5:114893964..114893987,- | ||
|ontology_enrichment_celltype=CL:0002319!4.74e-15!43;CL:0000221!7.28e-15!44;CL:0000133!7.28e-15!44;CL:0000055!2.06e-14!50;CL:0000393!4.18e-14!39;CL:0000211!4.18e-14!39;CL:0000540!5.17e-14!33;CL:0000047!5.17e-14!33;CL:0000031!5.17e-14!33;CL:0000404!5.17e-14!33;CL:0000117!8.17e-12!23;CL:0000337!8.17e-12!23 | |ontology_enrichment_celltype=CL:0002319!4.74e-15!43;CL:0000221!7.28e-15!44;CL:0000133!7.28e-15!44;CL:0000055!2.06e-14!50;CL:0000393!4.18e-14!39;CL:0000211!4.18e-14!39;CL:0000540!5.17e-14!33;CL:0000047!5.17e-14!33;CL:0000031!5.17e-14!33;CL:0000404!5.17e-14!33;CL:0000117!8.17e-12!23;CL:0000337!8.17e-12!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.17e-17,43;CL:0000221,6.83e-17,44;CL:0000133,6.83e-17,44;CL:0000540,7.90e-16,33;CL:0000047,7.90e-16,33;CL:0000031,7.90e-16,33;CL:0000404,7.90e-16,33;CL:0000393,2.88e-15,39;CL:0000211,2.88e-15,39;CL:0000117,1.43e-13,23;CL:0000337,1.43e-13,23;CL:0002321,3.95e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.35e-22!73;UBERON:0005743!6.35e-22!73;UBERON:0000073!1.82e-20!75;UBERON:0001016!1.82e-20!75;UBERON:0004121!1.26e-16!102;UBERON:0000924!1.26e-16!102;UBERON:0006601!1.26e-16!102;UBERON:0002346!1.69e-16!71;UBERON:0003075!1.69e-16!71;UBERON:0007284!1.69e-16!71;UBERON:0001049!5.37e-14!52;UBERON:0005068!5.37e-14!52;UBERON:0006241!5.37e-14!52;UBERON:0007135!5.37e-14!52;UBERON:0000033!1.08e-13!63;UBERON:0003056!3.08e-13!49;UBERON:0002616!2.15e-12!49;UBERON:0000955!2.37e-12!50;UBERON:0006238!2.37e-12!50;UBERON:0002020!5.23e-12!34;UBERON:0003080!9.41e-11!40;UBERON:0000153!1.91e-10!94;UBERON:0002780!2.50e-10!39;UBERON:0001890!2.50e-10!39;UBERON:0006240!2.50e-10!39;UBERON:0007811!3.75e-09!86;UBERON:0002791!5.85e-09!29;UBERON:0003528!5.85e-09!29;UBERON:0001893!5.85e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.49e-24,73;UBERON:0001016,1.10e-22,75;UBERON:0004121,6.73e-20,95;UBERON:0000924,6.73e-20,95;UBERON:0006601,6.73e-20,95;UBERON:0002346,7.44e-20,64;UBERON:0003075,7.44e-20,64;UBERON:0007284,7.44e-20,64;UBERON:0000073,3.76e-17,54;UBERON:0010371,6.77e-16,73;UBERON:0001049,2.34e-15,52;UBERON:0005068,2.34e-15,52;UBERON:0006241,2.34e-15,52;UBERON:0007135,2.34e-15,52;UBERON:0003056,2.44e-15,49;UBERON:0002020,5.01e-14,34;UBERON:0010314,5.39e-13,92;UBERON:0003080,1.56e-12,40;UBERON:0002780,5.28e-12,39;UBERON:0001890,5.28e-12,39;UBERON:0006240,5.28e-12,39;UBERON:0002616,1.81e-11,46;UBERON:0000955,6.05e-11,47;UBERON:0006238,6.05e-11,47;UBERON:0003528,3.17e-10,29;UBERON:0002791,3.17e-10,29;UBERON:0001893,3.17e-10,29;UBERON:0000956,7.47e-07,21;UBERON:0001869,7.47e-07,21;UBERON:0000203,7.47e-07,21 | |||
|phase1_expression=2.40223270657191,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0.255129870453209,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0.523523743973798,0,0,0,1.38486499773135,0.811015449756117,1.65192076945513,3.12956537739216,3.05235218932625,1.09843091367236,2.52758868796568,3.63964696225943,2.87505128729943,0,0,0,1.02903774414379,2.0057340795713,0.515672092277442,5.05791152148994,8.99284664762456,10.1413024560989,1.0165335962074,3.55717918444456,0.899899717281399,0,0,0.299600110518405,3.45796474789399,1.34796496001021,2.56511282830212,0.420649922702764,6.56997264128748,6.40518768759679,0.979926393719632,1.62937300731002,1.83843757322004,6.60695285996332,2.80912143787413,2.76491759861238,5.80299666012853,5.94669683415663,2.6045668527838,1.67509799400829,2.8138130501584,4.12555268997387,6.18720029494702,4.8406371471695,4.84638559145781,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.779358013808606,1.41335829804136,0.845060518660083,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,1.01104889002957,0.11418387971906,0,0.593768556259299,1.21439728736295,0.913396434936424,0.230615497256059,0.904335843315735,0.352766121407114,0.879666139307728,0.247194967734374,0.289198713839823,0,1.29413479957927,0.441683036920787,0.969750506270444,0,0.292780797011547,0.628340120440365,0,0.239630249011841,0.599902730993408,0.635351135365324,2.24685959107234,0,1.7591609295801,1.39059456153821,1.53429274398198,2.0778804455956,1.1356888414743,1.2220723662038,0,0,0.631325567659422,2.08192708740326,2.75882525320168,1.44049703844279,2.41127708537144,1.83698547708585,1.5373646434182,1.96773621575431,1.29351685369508,1.72454394346274,3.21480336285293,3.51902248327898,2.6303487891309,1.94633074457919,1.0447564995665,0.411564272815887,1.59227413454795,0.702213187313235,0.51469581422943,0.284163499395593,1.65700618028402,1.64168241986767,1.62055855314913,1.89395788468168,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.68231958851302,1.3377599609307,0,0.793351699990633,2.13288250535234,1.62565670302307,1.03093969057675,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.754005626400808,0.397912944082302,0.38992817423824,0,0.216138049874694,0,2.0863469104839,1.02823661348756,1.1270773567308,1.83286195060783,0.775809948670503,0.98190147846446,1.01178459398812,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.589676985339609,0.674586337154561,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.324270453550071,0,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0,0.184753190166605,1.13694847062291,2.77040459951444,3.05541154395339,1.87752198630802,1.67506257441816,1.19021820443007,0.975668239288994,0.945810864637146,1.32878813789265,0.478364305972461,0,0.690739927463582,0,0,0.54390568381871,0,0,0.80275294993896,0.820481806145422,1.80328439914343,0,1.89304931649754,1.95219372148319,1.93881057959519,1.19484398976276,1.33679204449436,0.849229592366497,2.42886421004937,1.75353514746787,1.18586333383957,0.963963949265421,0.283880170416537,2.49291845134157,1.95464351224291,0.824850614862677,0,0.971122544619926,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,1.08036656418786,1.4229455216103,1.28602221018955,1.41872186913819,1.07021290561242,1.64549020602121,1.2178597964584,0.704015124191131,0.21183207086382,0,0,0.645857706783622,0.361877549568935,0.596861720015682,0.164140899745061,0,1.48340241608408,0.341741761595705,1.23832120777933,1.11116716421827,0.941842285023455,0.136694227721025,0,0,0.279902904647316,0.552799895217695,0,1.89801596148681,1.01659733563424,0.972048067396211,0.627264888043406,0.87345025498471,1.07891477107857,0.41326727862668,0,0,0,0,2.54178128274764,1.48912641411388,0.972255941720238,1.42075805825504,2.02747350588934,0.704143431874524,1.5624526181274,0.943734099831398,0.241584120826006,0,0.316011120628178,1.82452693761148,1.43795340030758,0.77952493786677,0.537080087002444,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.914481679859998,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0,0.443971906748129,0.179427713218951,0.335769232728157,0,0,0.183151624267265,0.643105137237198,0.501572104035363,1.6942555278512,5.06357760157895,3.43737308063638,2.40594455281163,0.685082519770642,1.5107877947794,2.70009000092722,3.60256962579376,3.17199686288943,1.55328093525546,2.38710899443606,1.19707462020309,2.04880326904961,1.94485373654635,2.72497111416377,0.919217542250071,0.222246727801615,0.618105171716683,1.28367683836726,1.51618327058278,0.50695859978048,0.3772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|phase1_expression=2.40223270657191,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0.255129870453209,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0.523523743973798,0,0,0,1.38486499773135,0.811015449756117,1.65192076945513,3.12956537739216,3.05235218932625,1.09843091367236,2.52758868796568,3.63964696225943,2.87505128729943,0,0,0,1.02903774414379,2.0057340795713,0.515672092277442,5.05791152148994,8.99284664762456,10.1413024560989,1.0165335962074,3.55717918444456,0.899899717281399,0,0,0.299600110518405,3.45796474789399,1.34796496001021,2.56511282830212,0.420649922702764,6.56997264128748,6.40518768759679,0.979926393719632,1.62937300731002,1.83843757322004,6.60695285996332,2.80912143787413,2.76491759861238,5.80299666012853,5.94669683415663,2.6045668527838,1.67509799400829,2.8138130501584,4.12555268997387,6.18720029494702,4.8406371471695,4.84638559145781,0,0.302286240427142,0.289864488701678,0,0,0,0,0,0.561777680527007,1.02258193546835,0.779358013808606,1.41335829804136,0.845060518660083,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,1.01104889002957,0.11418387971906,0,0.593768556259299,1.21439728736295,0.913396434936424,0.230615497256059,0.904335843315735,0.352766121407114,0.879666139307728,0.247194967734374,0.289198713839823,0,1.29413479957927,0.441683036920787,0.969750506270444,0,0.292780797011547,0.628340120440365,0,0.239630249011841,0.599902730993408,0.635351135365324,2.24685959107234,0,1.7591609295801,1.39059456153821,1.53429274398198,2.0778804455956,1.1356888414743,1.2220723662038,0,0,0.631325567659422,2.08192708740326,2.75882525320168,1.44049703844279,2.41127708537144,1.83698547708585,1.5373646434182,1.96773621575431,1.29351685369508,1.72454394346274,3.21480336285293,3.51902248327898,2.6303487891309,1.94633074457919,1.0447564995665,0.411564272815887,1.59227413454795,0.702213187313235,0.51469581422943,0.284163499395593,1.65700618028402,1.64168241986767,1.62055855314913,1.89395788468168,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,1.68231958851302,1.3377599609307,0,0.793351699990633,2.13288250535234,1.62565670302307,1.03093969057675,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.754005626400808,0.397912944082302,0.38992817423824,0,0.216138049874694,0,2.0863469104839,1.02823661348756,1.1270773567308,1.83286195060783,0.775809948670503,0.98190147846446,1.01178459398812,0.738050739898011,0.31399745568275,0.123397163921801,0,0.500535317148282,0.589676985339609,0.674586337154561,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.324270453550071,0,0,0.372140947668503,0.624075346229121,0,0.358794827043824,0,0.184753190166605,1.13694847062291,2.77040459951444,3.05541154395339,1.87752198630802,1.67506257441816,1.19021820443007,0.975668239288994,0.945810864637146,1.32878813789265,0.478364305972461,0,0.690739927463582,0,0,0.54390568381871,0,0,0.80275294993896,0.820481806145422,1.80328439914343,0,1.89304931649754,1.95219372148319,1.93881057959519,1.19484398976276,1.33679204449436,0.849229592366497,2.42886421004937,1.75353514746787,1.18586333383957,0.963963949265421,0.283880170416537,2.49291845134157,1.95464351224291,0.824850614862677,0,0.971122544619926,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,1.08036656418786,1.4229455216103,1.28602221018955,1.41872186913819,1.07021290561242,1.64549020602121,1.2178597964584,0.704015124191131,0.21183207086382,0,0,0.645857706783622,0.361877549568935,0.596861720015682,0.164140899745061,0,1.48340241608408,0.341741761595705,1.23832120777933,1.11116716421827,0.941842285023455,0.136694227721025,0,0,0.279902904647316,0.552799895217695,0,1.89801596148681,1.01659733563424,0.972048067396211,0.627264888043406,0.87345025498471,1.07891477107857,0.41326727862668,0,0,0,0,2.54178128274764,1.48912641411388,0.972255941720238,1.42075805825504,2.02747350588934,0.704143431874524,1.5624526181274,0.943734099831398,0.241584120826006,0,0.316011120628178,1.82452693761148,1.43795340030758,0.77952493786677,0.537080087002444,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.914481679859998,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0,0.443971906748129,0.179427713218951,0.335769232728157,0,0,0.183151624267265,0.643105137237198,0.501572104035363,1.6942555278512,5.06357760157895,3.43737308063638,2.40594455281163,0.685082519770642,1.5107877947794,2.70009000092722,3.60256962579376,3.17199686288943,1.55328093525546,2.38710899443606,1.19707462020309,2.04880326904961,1.94485373654635,2.72497111416377,0.919217542250071,0.222246727801615,0.618105171716683,1.28367683836726,1.51618327058278,0.50695859978048,0.3772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| ||
|short_description=p3@Mmab | |short_description=p3@Mmab | ||
}} | }} |
Latest revision as of 16:35, 1 October 2015
Short description: | p3@Mmab |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mmab_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | 3bp_to_ENSMUST00000150519_5end |
EntrezGene: | Mmab |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.17e-17 | 43 |
ectodermal cell | 6.83e-17 | 44 |
neurectodermal cell | 6.83e-17 | 44 |
neuron | 7.90e-16 | 33 |
neuronal stem cell | 7.90e-16 | 33 |
neuroblast | 7.90e-16 | 33 |
electrically signaling cell | 7.90e-16 | 33 |
electrically responsive cell | 2.88e-15 | 39 |
electrically active cell | 2.88e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.43e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-13 | 23 |
embryonic cell | 3.95e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.49e-24 | 73 |
nervous system | 1.10e-22 | 75 |
ectoderm-derived structure | 6.73e-20 | 95 |
ectoderm | 6.73e-20 | 95 |
presumptive ectoderm | 6.73e-20 | 95 |
neurectoderm | 7.44e-20 | 64 |
neural plate | 7.44e-20 | 64 |
presumptive neural plate | 7.44e-20 | 64 |
regional part of nervous system | 3.76e-17 | 54 |
ecto-epithelium | 6.77e-16 | 73 |
neural tube | 2.34e-15 | 52 |
neural rod | 2.34e-15 | 52 |
future spinal cord | 2.34e-15 | 52 |
neural keel | 2.34e-15 | 52 |
pre-chordal neural plate | 2.44e-15 | 49 |
gray matter | 5.01e-14 | 34 |
structure with developmental contribution from neural crest | 5.39e-13 | 92 |
anterior neural tube | 1.56e-12 | 40 |
regional part of forebrain | 5.28e-12 | 39 |
forebrain | 5.28e-12 | 39 |
future forebrain | 5.28e-12 | 39 |
regional part of brain | 1.81e-11 | 46 |
brain | 6.05e-11 | 47 |
future brain | 6.05e-11 | 47 |
brain grey matter | 3.17e-10 | 29 |
regional part of telencephalon | 3.17e-10 | 29 |
telencephalon | 3.17e-10 | 29 |
cerebral cortex | 7.47e-07 | 21 |
cerebral hemisphere | 7.47e-07 | 21 |
pallium | 7.47e-07 | 21 |