FFCP PHASE1:Mm9::chrX:148235706..148235746,+: Difference between revisions
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{{FFCP|EntrezGene=59026|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-110bp_to_ENSMUST00000152757_5end|description=CAGE_peak_4_at_Huwe1_5end|id=chrX:148235706..148235746,+|ontology_enrichment_celltype=CL:0000540!9.99e-13!33;CL:0000047!9.99e-13!33;CL:0000031!9.99e-13!33;CL:0000404!9.99e-13!33;CL:0000393!1.96e-11!39;CL:0000211!1.96e-11!39;CL:0000117!2.35e-09!23;CL:0000337!2.35e-09!23|ontology_enrichment_celltype_v019_2=CL:0000540,9.29e-13,33;CL:0000047,9.29e-13,33;CL:0000031,9.29e-13,33;CL:0000404,9.29e-13,33;CL:0000393,1.84e-11,39;CL:0000211,1.84e-11,39;CL:0000117,2.24e-09,23;CL:0000337,2.24e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.52e-18!73;UBERON:0005743!4.52e-18!73;UBERON:0004121!1.34e-17!102;UBERON:0000924!1.34e-17!102;UBERON:0006601!1.34e-17!102;UBERON:0000073!2.63e-17!75;UBERON:0001016!2.63e-17!75;UBERON:0002346!6.09e-17!71;UBERON:0003075!6.09e-17!71;UBERON:0007284!6.09e-17!71;UBERON:0000033!6.81e-16!63;UBERON:0001049!1.21e-13!52;UBERON:0005068!1.21e-13!52;UBERON:0006241!1.21e-13!52;UBERON:0007135!1.21e-13!52;UBERON:0000955!1.31e-13!50;UBERON:0006238!1.31e-13!50;UBERON:0003056!1.47e-13!49;UBERON:0002616!3.57e-13!49;UBERON:0002020!2.22e-11!34;UBERON:0003080!2.66e-11!40;UBERON:0002780!1.03e-10!39;UBERON:0001890!1.03e-10!39;UBERON:0006240!1.03e-10!39;UBERON:0002791!8.53e-10!29;UBERON:0003528!8.53e-10!29;UBERON:0001893!8.53e-10!29;UBERON:0000153!1.23e-08!94;UBERON:0000956!9.90e-08!21;UBERON:0001869!9.90e-08!21;UBERON:0000203!9.90e-08!21;UBERON:0007811!1.30e-07!86;UBERON:0002021!6.14e-07!10;UBERON:0000411!6.14e-07!10;UBERON:0001950!6.14e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.56e-18,73;UBERON:0004121,1.36e-17,95;UBERON:0000924,1.36e-17,95;UBERON:0006601,1.36e-17,95;UBERON:0001016,2.14e-17,75;UBERON:0002346,3.65e-17,64;UBERON:0003075,3.65e-17,64;UBERON:0007284,3.65e-17,64;UBERON:0010371,4.35e-16,73;UBERON:0000073,8.49e-15,54;UBERON:0003056,1.35e-13,49;UBERON:0001049,1.43e-13,52;UBERON:0005068,1.43e-13,52;UBERON:0006241,1.43e-13,52;UBERON:0007135,1.43e-13,52;UBERON:0010314,1.54e-13,92;UBERON:0000955,8.77e-12,47;UBERON:0006238,8.77e-12,47;UBERON:0002020,2.08e-11,34;UBERON:0002616,2.32e-11,46;UBERON:0003080,2.50e-11,40;UBERON:0002780,9.73e-11,39;UBERON:0001890,9.73e-11,39;UBERON:0006240,9.73e-11,39;UBERON:0003528,8.09e-10,29;UBERON:0002791,8.09e-10,29;UBERON:0001893,8.09e-10,29;UBERON:0000956,9.51e-08,21;UBERON:0001869,9.51e-08,21;UBERON:0000203,9.51e-08,21;UBERON:0002021,5.92e-07,10;UBERON:0000411,5.92e-07,10;UBERON:0001950,5.92e-07,10;UBERON:0000922,5.97e-07,320|phase1_expression=5.60520964866779,1.39590163055744,0,3.0246421130683,0.500895729946347,2.51818907867835,2.33612640595526,0.903863264091034,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.961624426608971,0.333109761815663,1.61980213911861,1.39912375625629,0.630924330716475,0.959801035240171,1.27316895539409,3.74190476664707,2.87943758482567,3.39559725880616,1.27993938234725,1.14704640533585,1.72269589234506,0.430761996159075,1.07735616342945,0.950117097281869,0.756090389279792,0.443461021310609,1.27006134691926,0,0,1.73310971850765,1.82858109894342,1.83752420636132,0,0,0,0,0,0,4.53228544712078,4.25783111121961,2.75320128242522,0.782391344348039,0.65407546914134,1.5378032791413,1.1665793944457,1.1198913730029,0,0.335565212115473,0.725362142011344,0,3.34437266846731,3.15186783932632,2.57836046138721,7.48570905180512,14.2827564403449,10.1413024560989,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0,1.92109152660777,5.91030790158323,4.72520784160917,5.46844899513593,4.28476476605705,4.19650227808066,7.34944795289724,6.90087391331302,4.5960939330501,14.3150645299205,9.19348834213351,12.595735727012,6.72620067423989,6.86157327018072,3.12548022334056,6.97957497503452,9.00420176050688,8.09830713217094,7.95497180778903,10.3931326983345,9.69277118291563,0.530083353332288,4.30757892608677,2.89864488701678,3.44169550792555,0,3.2382191498269,7.79731700937203,2.68816132258401,2.38755514223978,4.94247935476367,2.85764605063156,4.94675404314476,5.91542363062058,3.84979432242953,12.7402619853323,14.2213340630666,0.216491041011214,1.77351905832569,2.52762222507392,1.94112595522402,2.58937883647172,3.26572705942614,3.46970653532272,3.04465478312141,4.15107895060905,4.37095657602605,3.76283862834255,4.52399728786832,0.247194967734374,1.3013942122792,0.884610551949874,2.58826959915855,2.87093973998512,4.84875253135222,3.72783522436244,6.73395833126558,6.28340120440365,2.29911349687732,2.75574786363617,0.599902730993408,3.04968544975355,11.833460512981,7.77751024791665,3.76963056338593,9.90798625095976,12.2743419518559,4.98691306942944,9.89671704713322,3.7680564624617,2.61254638281195,4.54900965180614,2.10441855886474,9.23855145035196,5.9774547152703,7.74267158163002,8.13806016312861,6.80364991513279,7.81493693737584,8.15205003669641,3.10444044886819,5.82033580918674,6.99692496620931,6.51019159406611,2.41115305670332,6.11703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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59026 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-110bp_to_ENSMUST00000152757_5end | |||
|cluster_id=chrX:148235706..148235746,+ | |||
|description=CAGE_peak_4_at_Huwe1_5end | |||
|id=chrX:148235706..148235746,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.99e-13!33;CL:0000047!9.99e-13!33;CL:0000031!9.99e-13!33;CL:0000404!9.99e-13!33;CL:0000393!1.96e-11!39;CL:0000211!1.96e-11!39;CL:0000117!2.35e-09!23;CL:0000337!2.35e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.29e-13,33;CL:0000047,9.29e-13,33;CL:0000031,9.29e-13,33;CL:0000404,9.29e-13,33;CL:0000393,1.84e-11,39;CL:0000211,1.84e-11,39;CL:0000117,2.24e-09,23;CL:0000337,2.24e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.52e-18!73;UBERON:0005743!4.52e-18!73;UBERON:0004121!1.34e-17!102;UBERON:0000924!1.34e-17!102;UBERON:0006601!1.34e-17!102;UBERON:0000073!2.63e-17!75;UBERON:0001016!2.63e-17!75;UBERON:0002346!6.09e-17!71;UBERON:0003075!6.09e-17!71;UBERON:0007284!6.09e-17!71;UBERON:0000033!6.81e-16!63;UBERON:0001049!1.21e-13!52;UBERON:0005068!1.21e-13!52;UBERON:0006241!1.21e-13!52;UBERON:0007135!1.21e-13!52;UBERON:0000955!1.31e-13!50;UBERON:0006238!1.31e-13!50;UBERON:0003056!1.47e-13!49;UBERON:0002616!3.57e-13!49;UBERON:0002020!2.22e-11!34;UBERON:0003080!2.66e-11!40;UBERON:0002780!1.03e-10!39;UBERON:0001890!1.03e-10!39;UBERON:0006240!1.03e-10!39;UBERON:0002791!8.53e-10!29;UBERON:0003528!8.53e-10!29;UBERON:0001893!8.53e-10!29;UBERON:0000153!1.23e-08!94;UBERON:0000956!9.90e-08!21;UBERON:0001869!9.90e-08!21;UBERON:0000203!9.90e-08!21;UBERON:0007811!1.30e-07!86;UBERON:0002021!6.14e-07!10;UBERON:0000411!6.14e-07!10;UBERON:0001950!6.14e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.56e-18,73;UBERON:0004121,1.36e-17,95;UBERON:0000924,1.36e-17,95;UBERON:0006601,1.36e-17,95;UBERON:0001016,2.14e-17,75;UBERON:0002346,3.65e-17,64;UBERON:0003075,3.65e-17,64;UBERON:0007284,3.65e-17,64;UBERON:0010371,4.35e-16,73;UBERON:0000073,8.49e-15,54;UBERON:0003056,1.35e-13,49;UBERON:0001049,1.43e-13,52;UBERON:0005068,1.43e-13,52;UBERON:0006241,1.43e-13,52;UBERON:0007135,1.43e-13,52;UBERON:0010314,1.54e-13,92;UBERON:0000955,8.77e-12,47;UBERON:0006238,8.77e-12,47;UBERON:0002020,2.08e-11,34;UBERON:0002616,2.32e-11,46;UBERON:0003080,2.50e-11,40;UBERON:0002780,9.73e-11,39;UBERON:0001890,9.73e-11,39;UBERON:0006240,9.73e-11,39;UBERON:0003528,8.09e-10,29;UBERON:0002791,8.09e-10,29;UBERON:0001893,8.09e-10,29;UBERON:0000956,9.51e-08,21;UBERON:0001869,9.51e-08,21;UBERON:0000203,9.51e-08,21;UBERON:0002021,5.92e-07,10;UBERON:0000411,5.92e-07,10;UBERON:0001950,5.92e-07,10;UBERON:0000922,5.97e-07,320 | |||
|phase1_expression=5.60520964866779,1.39590163055744,0,3.0246421130683,0.500895729946347,2.51818907867835,2.33612640595526,0.903863264091034,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.961624426608971,0.333109761815663,1.61980213911861,1.39912375625629,0.630924330716475,0.959801035240171,1.27316895539409,3.74190476664707,2.87943758482567,3.39559725880616,1.27993938234725,1.14704640533585,1.72269589234506,0.430761996159075,1.07735616342945,0.950117097281869,0.756090389279792,0.443461021310609,1.27006134691926,0,0,1.73310971850765,1.82858109894342,1.83752420636132,0,0,0,0,0,0,4.53228544712078,4.25783111121961,2.75320128242522,0.782391344348039,0.65407546914134,1.5378032791413,1.1665793944457,1.1198913730029,0,0.335565212115473,0.725362142011344,0,3.34437266846731,3.15186783932632,2.57836046138721,7.48570905180512,14.2827564403449,10.1413024560989,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0,1.92109152660777,5.91030790158323,4.72520784160917,5.46844899513593,4.28476476605705,4.19650227808066,7.34944795289724,6.90087391331302,4.5960939330501,14.3150645299205,9.19348834213351,12.595735727012,6.72620067423989,6.86157327018072,3.12548022334056,6.97957497503452,9.00420176050688,8.09830713217094,7.95497180778903,10.3931326983345,9.69277118291563,0.530083353332288,4.30757892608677,2.89864488701678,3.44169550792555,0,3.2382191498269,7.79731700937203,2.68816132258401,2.38755514223978,4.94247935476367,2.85764605063156,4.94675404314476,5.91542363062058,3.84979432242953,12.7402619853323,14.2213340630666,0.216491041011214,1.77351905832569,2.52762222507392,1.94112595522402,2.58937883647172,3.26572705942614,3.46970653532272,3.04465478312141,4.15107895060905,4.37095657602605,3.76283862834255,4.52399728786832,0.247194967734374,1.3013942122792,0.884610551949874,2.58826959915855,2.87093973998512,4.84875253135222,3.72783522436244,6.73395833126558,6.28340120440365,2.29911349687732,2.75574786363617,0.599902730993408,3.04968544975355,11.833460512981,7.77751024791665,3.76963056338593,9.90798625095976,12.2743419518559,4.98691306942944,9.89671704713322,3.7680564624617,2.61254638281195,4.54900965180614,2.10441855886474,9.23855145035196,5.9774547152703,7.74267158163002,8.13806016312861,6.80364991513279,7.81493693737584,8.15205003669641,3.10444044886819,5.82033580918674,6.99692496620931,6.51019159406611,2.41115305670332,6.11703948296315,4.52727816478817,4.93877127379064,7.76233640592123,0,1.80143534980301,1.98914449576915,3.93538967817454,3.04883877975425,3.24111710629827,2.60419209143731,3.54175617145327,3.08534225774756,5.34828072925938,2.41446061259657,2.45207218971056,4.27855609775049,3.11918181750281,2.83740833410495,1.75439984910399,0.878200461164203,2.28150911892632,9.2527577368216,6.5858951922742,0.660837565967596,1.58670339998127,7.67837701926842,6.0381534683714,4.25262622362908,4.43703754171354,3.11329261382818,2.66315876557583,1.89811624617805,1.64698954724011,0.754005626400808,3.18330355265841,3.11942539390592,4.49409704327111,2.80979464837102,0.995706366271836,4.93136542478012,7.88314737007129,10.1436962105772,5.49858585182348,4.26695471768777,4.34842083319975,3.98390183882821,3.24742325555125,2.66897837330337,2.96153193412321,2.37162101669719,2.66952169145751,2.94838492669805,2.24862112384854,1.21716072833102,2.65294875727659,1.01850340712568,0.575392274901621,1.13494658742525,1.92192989231657,5.75072826109418,3.34926852901653,2.80833905803104,3.53610429125956,6.09951205974501,3.85954817090694,0.554259570499814,9.28507917675375,6.84452901056509,8.31750920298422,4.22442446919304,4.18765643604539,3.09456733151818,2.53673742215138,1.7339865851681,2.21464689648775,4.30527875375215,1.63863314715738,2.76295970985433,1.15719246865209,4.52373851817817,1.63171705145613,3.93411418415229,1.65562047782839,9.63303539926752,12.7760738385501,1.14754461763673,1.00988370881749,8.83423014365519,5.46614242015294,6.67812532971677,8.84184552424442,7.35235624471901,7.07691326972081,4.04810701674894,6.13737301613755,9.09161889277004,7.71171159412337,4.5420827266646,5.34196811001766,2.44330439030364,4.94910368917606,0,4.61283208694465,3.02323556964751,2.45186603682668,2.65771703592696,3.07435147943927,2.32585463851399,1.09060118843252,2.49548164869305,1.26414703174326,1.05418608574999,1.03135543248187,2.38307724027652,10.443543453816,6.20921682157222,5.5727629108214,6.56158864476412,4.10248280484762,3.9491764944509,1.522324745573,2.3467170806371,1.48282449604674,2.20528398054962,3.13283880588812,2.42196640043858,3.19658502119226,2.74556391207214,3.93938159388147,0.874442509889552,10.0129663085675,2.05045056957423,4.54051109519089,2.96311243791539,2.0720530270516,2.05041341581538,1.37266903923914,4.24946074984638,3.91864066506242,2.9021994498929,0.954670618015114,5.06137589729817,5.28630614529807,4.32021363287205,3.3454127362315,3.05707589244649,2.83215127408124,2.14898984885873,2.09404753587224,1.03691978633434,3.10669656543463,0.56369293868419,5.83114529571517,3.30916980914195,5.05573089694524,4.262274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| |||
|short_description=p4@Huwe1 | |||
}} |
Latest revision as of 16:41, 1 October 2015
Short description: | p4@Huwe1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Huwe1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -110bp_to_ENSMUST00000152757_5end |
EntrezGene: | Huwe1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.29e-13 | 33 |
neuronal stem cell | 9.29e-13 | 33 |
neuroblast | 9.29e-13 | 33 |
electrically signaling cell | 9.29e-13 | 33 |
electrically responsive cell | 1.84e-11 | 39 |
electrically active cell | 1.84e-11 | 39 |
CNS neuron (sensu Vertebrata) | 2.24e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.56e-18 | 73 |
ectoderm-derived structure | 1.36e-17 | 95 |
ectoderm | 1.36e-17 | 95 |
presumptive ectoderm | 1.36e-17 | 95 |
nervous system | 2.14e-17 | 75 |
neurectoderm | 3.65e-17 | 64 |
neural plate | 3.65e-17 | 64 |
presumptive neural plate | 3.65e-17 | 64 |
ecto-epithelium | 4.35e-16 | 73 |
regional part of nervous system | 8.49e-15 | 54 |
pre-chordal neural plate | 1.35e-13 | 49 |
neural tube | 1.43e-13 | 52 |
neural rod | 1.43e-13 | 52 |
future spinal cord | 1.43e-13 | 52 |
neural keel | 1.43e-13 | 52 |
structure with developmental contribution from neural crest | 1.54e-13 | 92 |
brain | 8.77e-12 | 47 |
future brain | 8.77e-12 | 47 |
gray matter | 2.08e-11 | 34 |
regional part of brain | 2.32e-11 | 46 |
anterior neural tube | 2.50e-11 | 40 |
regional part of forebrain | 9.73e-11 | 39 |
forebrain | 9.73e-11 | 39 |
future forebrain | 9.73e-11 | 39 |
brain grey matter | 8.09e-10 | 29 |
regional part of telencephalon | 8.09e-10 | 29 |
telencephalon | 8.09e-10 | 29 |
cerebral cortex | 9.51e-08 | 21 |
cerebral hemisphere | 9.51e-08 | 21 |
pallium | 9.51e-08 | 21 |
occipital lobe | 5.92e-07 | 10 |
visual cortex | 5.92e-07 | 10 |
neocortex | 5.92e-07 | 10 |
embryo | 5.97e-07 | 320 |