FFCP PHASE1:Mm9::chr18:69681020..69681032,+: Difference between revisions
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{{FFCP|EntrezGene=21413|HGNC=|MCL_coexpression_id=731|UniProt=|association_with_transcript=-159bp_to_ENSMUST00000125154_5end|description=CAGE_peak_23_at_Tcf4_5end|id=chr18:69681020..69681032,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.75e-17!21;UBERON:0001869!1.75e-17!21;UBERON:0000203!1.75e-17!21;UBERON:0002791!5.12e-14!29;UBERON:0003528!5.12e-14!29;UBERON:0001893!5.12e-14!29;UBERON:0002619!1.23e-13!17;UBERON:0002020!1.08e-11!34;UBERON:0003080!1.60e-11!40;UBERON:0002780!2.65e-11!39;UBERON:0001890!2.65e-11!39;UBERON:0006240!2.65e-11!39;UBERON:0002021!2.42e-10!10;UBERON:0000411!2.42e-10!10;UBERON:0001950!2.42e-10!10;UBERON:0003056!4.44e-10!49;UBERON:0000955!8.25e-10!50;UBERON:0006238!8.25e-10!50;UBERON:0001049!1.54e-09!52;UBERON:0005068!1.54e-09!52;UBERON:0006241!1.54e-09!52;UBERON:0007135!1.54e-09!52;UBERON:0002616!3.33e-09!49;UBERON:0000033!9.30e-09!63;UBERON:0002346!8.36e-07!71;UBERON:0003075!8.36e-07!71;UBERON:0007284!8.36e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.12e-44,21;UBERON:0001869,1.12e-44,21;UBERON:0000203,1.12e-44,21;UBERON:0002021,2.67e-32,10;UBERON:0000411,2.67e-32,10;UBERON:0001950,2.67e-32,10;UBERON:0002619,8.78e-32,17;UBERON:0003528,2.01e-31,29;UBERON:0002791,2.01e-31,29;UBERON:0001893,2.01e-31,29;UBERON:0002020,2.66e-26,34;UBERON:0000955,9.60e-23,47;UBERON:0006238,9.60e-23,47;UBERON:0002780,1.72e-22,39;UBERON:0001890,1.72e-22,39;UBERON:0006240,1.72e-22,39;UBERON:0003080,7.65e-22,40;UBERON:0002616,7.81e-21,46;UBERON:0001049,5.17e-18,52;UBERON:0005068,5.17e-18,52;UBERON:0006241,5.17e-18,52;UBERON:0007135,5.17e-18,52;UBERON:0000073,3.27e-17,54;UBERON:0003056,3.37e-17,49;UBERON:0002346,5.89e-14,64;UBERON:0003075,5.89e-14,64;UBERON:0007284,5.89e-14,64;UBERON:0001017,2.69e-13,73;UBERON:0001016,7.69e-13,75;UBERON:0010371,8.69e-12,73;UBERON:0004121,2.46e-09,95;UBERON:0000924,2.46e-09,95;UBERON:0006601,2.46e-09,95;UBERON:0010314,1.33e-08,92|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.75748946187577,0.777719596297134,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0.768436610643109,8.8136170462206,6.21027316325777,7.57169860864975,0,0,0.367472397644862,0.575072826109418,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,1.56441888173049,3.06858548796397,0.20778804455956,0.324482526135515,0.305518091550949,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0.351902248327898,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,6.30869845692382,10.8049842998249,0,0,0,0,0,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,3.22227665555024,3.43737308063638,3.43706364687375,1.37016503954128,3.0215755895588,1.35004500046361,4.05289082901798,2.26571204492102,2.07104124700728,0,0,0,0.729320151204882,0.209613162627982,0.735374033800057,0,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.561849044819294,0.576226371643824,0.689225627467359,1.42888107384922,0.811190281613988,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,1.31753132581463,1.09998990259179,1.46342378298218,1.8414879800649,0.950628796921032,0.561142271657738,1.06771516311757,0.591026894253381,1.22769312950907,0.929621047115796,0.964533054905707,0.749431733813838,0.467863216890817,0.429742108096597,0,0.220591419119515,0|short_description=p23@Tcf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21413 | |||
|HGNC= | |||
|MCL_coexpression_id=731 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-159bp_to_ENSMUST00000125154_5end | |||
|cluster_id=chr18:69681020..69681032,+ | |||
|description=CAGE_peak_23_at_Tcf4_5end | |||
|id=chr18:69681020..69681032,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.75e-17!21;UBERON:0001869!1.75e-17!21;UBERON:0000203!1.75e-17!21;UBERON:0002791!5.12e-14!29;UBERON:0003528!5.12e-14!29;UBERON:0001893!5.12e-14!29;UBERON:0002619!1.23e-13!17;UBERON:0002020!1.08e-11!34;UBERON:0003080!1.60e-11!40;UBERON:0002780!2.65e-11!39;UBERON:0001890!2.65e-11!39;UBERON:0006240!2.65e-11!39;UBERON:0002021!2.42e-10!10;UBERON:0000411!2.42e-10!10;UBERON:0001950!2.42e-10!10;UBERON:0003056!4.44e-10!49;UBERON:0000955!8.25e-10!50;UBERON:0006238!8.25e-10!50;UBERON:0001049!1.54e-09!52;UBERON:0005068!1.54e-09!52;UBERON:0006241!1.54e-09!52;UBERON:0007135!1.54e-09!52;UBERON:0002616!3.33e-09!49;UBERON:0000033!9.30e-09!63;UBERON:0002346!8.36e-07!71;UBERON:0003075!8.36e-07!71;UBERON:0007284!8.36e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.12e-44,21;UBERON:0001869,1.12e-44,21;UBERON:0000203,1.12e-44,21;UBERON:0002021,2.67e-32,10;UBERON:0000411,2.67e-32,10;UBERON:0001950,2.67e-32,10;UBERON:0002619,8.78e-32,17;UBERON:0003528,2.01e-31,29;UBERON:0002791,2.01e-31,29;UBERON:0001893,2.01e-31,29;UBERON:0002020,2.66e-26,34;UBERON:0000955,9.60e-23,47;UBERON:0006238,9.60e-23,47;UBERON:0002780,1.72e-22,39;UBERON:0001890,1.72e-22,39;UBERON:0006240,1.72e-22,39;UBERON:0003080,7.65e-22,40;UBERON:0002616,7.81e-21,46;UBERON:0001049,5.17e-18,52;UBERON:0005068,5.17e-18,52;UBERON:0006241,5.17e-18,52;UBERON:0007135,5.17e-18,52;UBERON:0000073,3.27e-17,54;UBERON:0003056,3.37e-17,49;UBERON:0002346,5.89e-14,64;UBERON:0003075,5.89e-14,64;UBERON:0007284,5.89e-14,64;UBERON:0001017,2.69e-13,73;UBERON:0001016,7.69e-13,75;UBERON:0010371,8.69e-12,73;UBERON:0004121,2.46e-09,95;UBERON:0000924,2.46e-09,95;UBERON:0006601,2.46e-09,95;UBERON:0010314,1.33e-08,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.75748946187577,0.777719596297134,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0.768436610643109,8.8136170462206,6.21027316325777,7.57169860864975,0,0,0.367472397644862,0.575072826109418,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0.427115042397309,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,1.56441888173049,3.06858548796397,0.20778804455956,0.324482526135515,0.305518091550949,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0.351902248327898,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,6.30869845692382,10.8049842998249,0,0,0,0,0,0,0,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,3.22227665555024,3.43737308063638,3.43706364687375,1.37016503954128,3.0215755895588,1.35004500046361,4.05289082901798,2.26571204492102,2.07104124700728,0,0,0,0.729320151204882,0.209613162627982,0.735374033800057,0,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,0.561849044819294,0.576226371643824,0.689225627467359,1.42888107384922,0.811190281613988,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,1.31753132581463,1.09998990259179,1.46342378298218,1.8414879800649,0.950628796921032,0.561142271657738,1.06771516311757,0.591026894253381,1.22769312950907,0.929621047115796,0.964533054905707,0.749431733813838,0.467863216890817,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p23@Tcf4 | |||
}} |
Latest revision as of 16:42, 1 October 2015
Short description: | p23@Tcf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Tcf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:731 |
Association with transcript: | -159bp_to_ENSMUST00000125154_5end |
EntrezGene: | Tcf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.12e-44 | 21 |
cerebral hemisphere | 1.12e-44 | 21 |
pallium | 1.12e-44 | 21 |
occipital lobe | 2.67e-32 | 10 |
visual cortex | 2.67e-32 | 10 |
neocortex | 2.67e-32 | 10 |
regional part of cerebral cortex | 8.78e-32 | 17 |
brain grey matter | 2.01e-31 | 29 |
regional part of telencephalon | 2.01e-31 | 29 |
telencephalon | 2.01e-31 | 29 |
gray matter | 2.66e-26 | 34 |
brain | 9.60e-23 | 47 |
future brain | 9.60e-23 | 47 |
regional part of forebrain | 1.72e-22 | 39 |
forebrain | 1.72e-22 | 39 |
future forebrain | 1.72e-22 | 39 |
anterior neural tube | 7.65e-22 | 40 |
regional part of brain | 7.81e-21 | 46 |
neural tube | 5.17e-18 | 52 |
neural rod | 5.17e-18 | 52 |
future spinal cord | 5.17e-18 | 52 |
neural keel | 5.17e-18 | 52 |
regional part of nervous system | 3.27e-17 | 54 |
pre-chordal neural plate | 3.37e-17 | 49 |
neurectoderm | 5.89e-14 | 64 |
neural plate | 5.89e-14 | 64 |
presumptive neural plate | 5.89e-14 | 64 |
central nervous system | 2.69e-13 | 73 |
nervous system | 7.69e-13 | 75 |
ecto-epithelium | 8.69e-12 | 73 |
ectoderm-derived structure | 2.46e-09 | 95 |
ectoderm | 2.46e-09 | 95 |
presumptive ectoderm | 2.46e-09 | 95 |
structure with developmental contribution from neural crest | 1.33e-08 | 92 |