FFCP PHASE1:Mm9::chr8:125778047..125778068,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:125778047..125778068,-
|short_description=p3@1300018I17Rik
|description=CAGE_peak_3_at_1300018I17Rik_5end
|association_with_transcript=0bp_to_ENSMUST000001...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72325 | |EntrezGene=72325 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=376 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000146136_5end | |||
|cluster_id=chr8:125778047..125778068,- | |||
|description=CAGE_peak_3_at_1300018I17Rik_5end | |||
|id=chr8:125778047..125778068,- | |||
|ontology_enrichment_celltype=CL:0000117!6.60e-12!23;CL:0000337!6.60e-12!23;CL:0000540!1.26e-09!33;CL:0000047!1.26e-09!33;CL:0000031!1.26e-09!33;CL:0000404!1.26e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-14,23;CL:0000337,5.05e-14,23;CL:0000540,2.05e-11,33;CL:0000047,2.05e-11,33;CL:0000031,2.05e-11,33;CL:0000404,2.05e-11,33;CL:0000393,6.79e-08,39;CL:0000211,6.79e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.07e-15!73;UBERON:0005743!3.07e-15!73;UBERON:0001049!3.15e-15!52;UBERON:0005068!3.15e-15!52;UBERON:0006241!3.15e-15!52;UBERON:0007135!3.15e-15!52;UBERON:0000073!2.75e-14!75;UBERON:0001016!2.75e-14!75;UBERON:0000955!3.32e-14!50;UBERON:0006238!3.32e-14!50;UBERON:0002616!1.12e-13!49;UBERON:0000033!1.41e-12!63;UBERON:0002346!1.55e-12!71;UBERON:0003075!1.55e-12!71;UBERON:0007284!1.55e-12!71;UBERON:0002020!8.88e-12!34;UBERON:0004121!6.02e-11!102;UBERON:0000924!6.02e-11!102;UBERON:0006601!6.02e-11!102;UBERON:0003080!6.26e-11!40;UBERON:0003056!8.06e-11!49;UBERON:0007811!1.43e-10!86;UBERON:0002780!1.86e-10!39;UBERON:0001890!1.86e-10!39;UBERON:0006240!1.86e-10!39;UBERON:0000153!5.12e-10!94;UBERON:0002791!1.73e-09!29;UBERON:0003528!1.73e-09!29;UBERON:0001893!1.73e-09!29;UBERON:0000956!9.07e-07!21;UBERON:0001869!9.07e-07!21;UBERON:0000203!9.07e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.35e-18,54;UBERON:0002346,6.68e-18,64;UBERON:0003075,6.68e-18,64;UBERON:0007284,6.68e-18,64;UBERON:0001017,8.79e-18,73;UBERON:0001049,3.46e-17,52;UBERON:0005068,3.46e-17,52;UBERON:0006241,3.46e-17,52;UBERON:0007135,3.46e-17,52;UBERON:0001016,1.15e-16,75;UBERON:0010371,1.38e-15,73;UBERON:0004121,4.04e-15,95;UBERON:0000924,4.04e-15,95;UBERON:0006601,4.04e-15,95;UBERON:0002020,1.24e-14,34;UBERON:0000955,2.48e-14,47;UBERON:0006238,2.48e-14,47;UBERON:0002616,1.00e-13,46;UBERON:0003056,2.11e-12,49;UBERON:0003080,2.23e-12,40;UBERON:0003528,7.67e-12,29;UBERON:0002791,7.67e-12,29;UBERON:0001893,7.67e-12,29;UBERON:0002780,8.15e-12,39;UBERON:0001890,8.15e-12,39;UBERON:0006240,8.15e-12,39;UBERON:0010314,4.87e-11,92;UBERON:0000956,1.54e-08,21;UBERON:0001869,1.54e-08,21;UBERON:0000203,1.54e-08,21 | |||
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| ||
|short_description=p3@1300018I17Rik | |||
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Latest revision as of 16:46, 1 October 2015
Short description: | p3@1300018I17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1300018I17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:376 |
Association with transcript: | 0bp_to_ENSMUST00000146136_5end |
EntrezGene: | 1300018I17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.05e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-14 | 23 |
neuron | 2.05e-11 | 33 |
neuronal stem cell | 2.05e-11 | 33 |
neuroblast | 2.05e-11 | 33 |
electrically signaling cell | 2.05e-11 | 33 |
electrically responsive cell | 6.79e-08 | 39 |
electrically active cell | 6.79e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.35e-18 | 54 |
neurectoderm | 6.68e-18 | 64 |
neural plate | 6.68e-18 | 64 |
presumptive neural plate | 6.68e-18 | 64 |
central nervous system | 8.79e-18 | 73 |
neural tube | 3.46e-17 | 52 |
neural rod | 3.46e-17 | 52 |
future spinal cord | 3.46e-17 | 52 |
neural keel | 3.46e-17 | 52 |
nervous system | 1.15e-16 | 75 |
ecto-epithelium | 1.38e-15 | 73 |
ectoderm-derived structure | 4.04e-15 | 95 |
ectoderm | 4.04e-15 | 95 |
presumptive ectoderm | 4.04e-15 | 95 |
gray matter | 1.24e-14 | 34 |
brain | 2.48e-14 | 47 |
future brain | 2.48e-14 | 47 |
regional part of brain | 1.00e-13 | 46 |
pre-chordal neural plate | 2.11e-12 | 49 |
anterior neural tube | 2.23e-12 | 40 |
brain grey matter | 7.67e-12 | 29 |
regional part of telencephalon | 7.67e-12 | 29 |
telencephalon | 7.67e-12 | 29 |
regional part of forebrain | 8.15e-12 | 39 |
forebrain | 8.15e-12 | 39 |
future forebrain | 8.15e-12 | 39 |
structure with developmental contribution from neural crest | 4.87e-11 | 92 |
cerebral cortex | 1.54e-08 | 21 |
cerebral hemisphere | 1.54e-08 | 21 |
pallium | 1.54e-08 | 21 |