FFCP PHASE1:Mm9::chrX:151650987..151650999,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20229 | |EntrezGene=20229 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P48026 | |UniProt=P48026 | ||
|association_with_transcript=0bp_to_ENSMUST00000026318,ENSMUST00000152463_5end | |association_with_transcript=0bp_to_ENSMUST00000026318,ENSMUST00000152463_5end | ||
|cluster_id=chrX:151650987..151650999,- | |||
|description=CAGE_peak_4_at_Sat1_5end | |description=CAGE_peak_4_at_Sat1_5end | ||
|id=chrX:151650987..151650999,- | |id=chrX:151650987..151650999,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.18e-07,23;CL:0000337,2.18e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.85e-09!63;UBERON:0001017!8.98e-09!73;UBERON:0005743!8.98e-09!73;UBERON:0002346!9.16e-09!71;UBERON:0003075!9.16e-09!71;UBERON:0007284!9.16e-09!71;UBERON:0004121!3.30e-08!102;UBERON:0000924!3.30e-08!102;UBERON:0006601!3.30e-08!102;UBERON:0001049!3.50e-08!52;UBERON:0005068!3.50e-08!52;UBERON:0006241!3.50e-08!52;UBERON:0007135!3.50e-08!52;UBERON:0000073!5.73e-08!75;UBERON:0001016!5.73e-08!75;UBERON:0000955!2.35e-07!50;UBERON:0006238!2.35e-07!50;UBERON:0002616!3.31e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.70e-10,95;UBERON:0000924,7.70e-10,95;UBERON:0006601,7.70e-10,95;UBERON:0002346,9.32e-10,64;UBERON:0003075,9.32e-10,64;UBERON:0007284,9.32e-10,64;UBERON:0001017,1.27e-09,73;UBERON:0010371,1.85e-09,73;UBERON:0000073,4.71e-09,54;UBERON:0001016,6.68e-09,75;UBERON:0001049,1.34e-08,52;UBERON:0005068,1.34e-08,52;UBERON:0006241,1.34e-08,52;UBERON:0007135,1.34e-08,52;UBERON:0010314,7.65e-08,92;UBERON:0000955,5.60e-07,47;UBERON:0006238,5.60e-07,47;UBERON:0002616,8.32e-07,46 | |||
|phase1_expression=2.08193501236232,1.04692622291808,0.909998478779072,0,0,1.34303417529512,1.63528848416868,0.387369970324729,0.422366166455,0.468129052643987,1.02730780935303,0.478632953972018,0.513602189793617,1.13646523144697,0,0.404950534779652,0.699561878128147,0.788655413395594,1.64537320326887,0.42438965179803,0.425216450755349,0.794327609607082,0.522399578277871,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,0.950117097281869,0.252030129759931,1.55211357458713,1.27006134691926,0,0,0,0.831173226792462,0.816677425049476,7.53356935326434,4.6880120671428,11.5175223674236,14.7057872007754,12.9778642142105,14.0798002379035,1.76255545165808,2.23029248682932,1.10128051297009,2.34717403304412,1.52617609466313,0.439372365468944,1.1665793944457,1.67983705950435,2.87505128729943,1.67782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,1.03134418455488,1.41621522601718,2.11596391708813,0,0.677689064138264,3.55717918444456,0.449949858640699,0,0,0.299600110518405,0.768436610643109,1.03689612308478,1.21505344498522,1.47227472945967,3.71346279724945,2.20868540951614,1.46988959057945,1.62937300731002,0,1.10115880999389,2.17068474744819,1.38245879930619,1.97829431595291,3.56801810049398,3.64639359389732,2.23346399201105,3.37657566019008,1.68078072554491,0.589257170947335,2.13557521198654,2.60959224155421,0.075726193333184,0.604572480854284,1.44932244350839,0,0,0,0,0.448026887097336,0.280888840263504,1.36344258062446,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.445326417194474,1.38788261412909,0,1.15307748628029,1.05505848386836,1.17588707135705,0.753999547978053,1.48316980640624,0.289198713839823,0,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,1.46390398505774,1.46612694769419,0.510914110417183,1.91704199209472,3.59941638596045,2.54140454146129,1.9472783122627,0.457500602818626,0.879580464790051,0.521472960576829,1.02286182932132,0.83115217823824,1.1356888414743,0.712875546952214,0.497627882440372,0.252722758433675,0.841767423545896,0.780722657776222,2.5289231487682,1.44049703844279,1.80845781402858,1.97305847538851,2.3060469651273,1.49922759295566,1.55222022443409,1.07783996466421,0.945530400839096,0.703804496655795,1.09597866213787,1.39023624612799,1.39300866608867,0.823128545631774,1.19420560091096,7.02213187313235,3.08817488537658,2.27330799516474,0.207125772535502,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,1.69693824176116,1.62773761325285,2.41446061259657,1.86824547787471,0.822799249567402,1.97000956894914,1.05389452409612,0.730999937126662,0.878200461164203,0.402619256281115,1.05144974282064,0.514523061896422,0,0.528901133327089,0.853153002140936,0.232236671860439,0.515469845288373,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,0.58489226135736,0.898819408654221,1.08069024937347,1.1948476395262,1.70701110857774,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,1.26244475802573,1.70738650235495,0.590440591918409,0.784993639206874,0.863780147452604,0.592905254174298,0.500535317148282,0.196558995113203,0,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.624075346229121,0,0.717589654087649,0.964887042726734,0.739012760666419,0.947457058852424,0.325929952884052,0.678980343100753,1.87752198630802,0.335012514883631,0.714130922658041,1.17080188714679,1.7339865851681,2.21464689648775,1.59454768657487,1.14704320301017,0.863424909329478,1.15719246865209,1.50791283939272,1.08781136763742,0,1.65562047782839,2.40825884981688,1.75817529888305,0.327869890753351,1.00988370881749,0.94652465824877,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,1.28528526568723,0.709700426041343,1.06839362200353,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.09060118843252,1.78248689192361,1.26414703174326,0,1.03135543248187,2.04263763452273,0.900305470156551,1.68166288917581,0.857348140126369,0.886701168211368,1.24858172321449,2.79733335023606,2.74018454203139,0.704015124191131,3.1774810629573,1.10264199027481,0.32977250588296,0.807322133479528,1.14594557363496,0.835606408021955,1.14898629821543,0.291480836629851,1.48340241608408,0.683483523191411,1.23832120777933,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,1.5298058699447,2.23922323717853,2.48759952847963,0,0.790839983952838,1.01659733563424,0.86404272657441,0.836353184057875,0.87345025498471,0.674321731924103,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0.747582730219894,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,1.64300134104056,1.3020438484395,1.46803082195995,0.966336483304024,0.288030006257865,0.632022241256357,1.62180172232131,0.924398614483445,0.649604114888975,0.716106782669926,1.39076948346885,0.240390899039938,0.738447635872886,1.51449674922221,1.447929326445,1.61321896218945,0.877120926657772,1.05833025804362,1.28564592399726,0.453460767230423,0.665957860122194,0.269141569828427,0.839423081820392,0.579568782096571,0.750729901804728,0.549454872801795,0.428736758158132,2.50786052017682,2.25900737046827,2.30162618253588,0.572895513439397,1.03111909406213,2.05524755931193,0,2.70009000092722,2.70192721934532,0.906284817968409,1.55328093525546,0.62272408550506,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,1.33348036680969,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,1.591905626988,0.640251524048693,0.861532034334199,0.952587382566147,0.463537303779422,1.15745532278223,0,0.588795680537589,1.02860775715625,0.887379030796687,1.66905332963125,0.872078499793971,0.752875043322645,1.18460451048347,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.985044823755635,1.63692417267876,1.08455788830176,0.385813221962283,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.661774257358546,0.695603506861264 | |phase1_expression=2.08193501236232,1.04692622291808,0.909998478779072,0,0,1.34303417529512,1.63528848416868,0.387369970324729,0.422366166455,0.468129052643987,1.02730780935303,0.478632953972018,0.513602189793617,1.13646523144697,0,0.404950534779652,0.699561878128147,0.788655413395594,1.64537320326887,0.42438965179803,0.425216450755349,0.794327609607082,0.522399578277871,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,1.07735616342945,0.950117097281869,0.252030129759931,1.55211357458713,1.27006134691926,0,0,0,0.831173226792462,0.816677425049476,7.53356935326434,4.6880120671428,11.5175223674236,14.7057872007754,12.9778642142105,14.0798002379035,1.76255545165808,2.23029248682932,1.10128051297009,2.34717403304412,1.52617609466313,0.439372365468944,1.1665793944457,1.67983705950435,2.87505128729943,1.67782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.85960031981627,1.03134418455488,1.41621522601718,2.11596391708813,0,0.677689064138264,3.55717918444456,0.449949858640699,0,0,0.299600110518405,0.768436610643109,1.03689612308478,1.21505344498522,1.47227472945967,3.71346279724945,2.20868540951614,1.46988959057945,1.62937300731002,0,1.10115880999389,2.17068474744819,1.38245879930619,1.97829431595291,3.56801810049398,3.64639359389732,2.23346399201105,3.37657566019008,1.68078072554491,0.589257170947335,2.13557521198654,2.60959224155421,0.075726193333184,0.604572480854284,1.44932244350839,0,0,0,0,0.448026887097336,0.280888840263504,1.36344258062446,0.519572009205738,0.70667914902068,1.40843419776681,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.445326417194474,1.38788261412909,0,1.15307748628029,1.05505848386836,1.17588707135705,0.753999547978053,1.48316980640624,0.289198713839823,0,0.161766849947409,0.883366073841574,0.969750506270444,1.86391761218122,1.46390398505774,1.46612694769419,0.510914110417183,1.91704199209472,3.59941638596045,2.54140454146129,1.9472783122627,0.457500602818626,0.879580464790051,0.521472960576829,1.02286182932132,0.83115217823824,1.1356888414743,0.712875546952214,0.497627882440372,0.252722758433675,0.841767423545896,0.780722657776222,2.5289231487682,1.44049703844279,1.80845781402858,1.97305847538851,2.3060469651273,1.49922759295566,1.55222022443409,1.07783996466421,0.945530400839096,0.703804496655795,1.09597866213787,1.39023624612799,1.39300866608867,0.823128545631774,1.19420560091096,7.02213187313235,3.08817488537658,2.27330799516474,0.207125772535502,0.469052119962192,0.720248245844059,0.473489471170421,0.590292695242212,1.69693824176116,1.62773761325285,2.41446061259657,1.86824547787471,0.822799249567402,1.97000956894914,1.05389452409612,0.730999937126662,0.878200461164203,0.402619256281115,1.05144974282064,0.514523061896422,0,0.528901133327089,0.853153002140936,0.232236671860439,0.515469845288373,1.21010114774006,0.889512175379481,1.52180500890047,0.474529061544512,0.823494773620054,0.754005626400808,1.39269530428806,0.58489226135736,0.898819408654221,1.08069024937347,1.1948476395262,1.70701110857774,0.228497025219458,1.1270773567308,1.01825663922657,1.16371492300575,1.26244475802573,1.70738650235495,0.590440591918409,0.784993639206874,0.863780147452604,0.592905254174298,0.500535317148282,0.196558995113203,0,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0.624075346229121,0,0.717589654087649,0.964887042726734,0.739012760666419,0.947457058852424,0.325929952884052,0.678980343100753,1.87752198630802,0.335012514883631,0.714130922658041,1.17080188714679,1.7339865851681,2.21464689648775,1.59454768657487,1.14704320301017,0.863424909329478,1.15719246865209,1.50791283939272,1.08781136763742,0,1.65562047782839,2.40825884981688,1.75817529888305,0.327869890753351,1.00988370881749,0.94652465824877,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,1.28528526568723,0.709700426041343,1.06839362200353,1.46598263418218,0.494910368917606,0,0.242780636154981,0.604647113929502,1.50884063804718,1.18120757152309,0.922305443831782,1.03371317267288,1.09060118843252,1.78248689192361,1.26414703174326,0,1.03135543248187,2.04263763452273,0.900305470156551,1.68166288917581,0.857348140126369,0.886701168211368,1.24858172321449,2.79733335023606,2.74018454203139,0.704015124191131,3.1774810629573,1.10264199027481,0.32977250588296,0.807322133479528,1.14594557363496,0.835606408021955,1.14898629821543,0.291480836629851,1.48340241608408,0.683483523191411,1.23832120777933,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,1.5298058699447,2.23922323717853,2.48759952847963,0,0.790839983952838,1.01659733563424,0.86404272657441,0.836353184057875,0.87345025498471,0.674321731924103,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0.747582730219894,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,1.64300134104056,1.3020438484395,1.46803082195995,0.966336483304024,0.288030006257865,0.632022241256357,1.62180172232131,0.924398614483445,0.649604114888975,0.716106782669926,1.39076948346885,0.240390899039938,0.738447635872886,1.51449674922221,1.447929326445,1.61321896218945,0.877120926657772,1.05833025804362,1.28564592399726,0.453460767230423,0.665957860122194,0.269141569828427,0.839423081820392,0.579568782096571,0.750729901804728,0.549454872801795,0.428736758158132,2.50786052017682,2.25900737046827,2.30162618253588,0.572895513439397,1.03111909406213,2.05524755931193,0,2.70009000092722,2.70192721934532,0.906284817968409,1.55328093525546,0.62272408550506,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,1.33348036680969,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.32038438970253,1.591905626988,0.640251524048693,0.861532034334199,0.952587382566147,0.463537303779422,1.15745532278223,0,0.588795680537589,1.02860775715625,0.887379030796687,1.66905332963125,0.872078499793971,0.752875043322645,1.18460451048347,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.237270036248348,0.985044823755635,1.63692417267876,1.08455788830176,0.385813221962283,0.999242311751784,0.233931608445408,0.859484216193193,0.956441660344217,0.661774257358546,0.695603506861264 | ||
|short_description=p4@Sat1 | |short_description=p4@Sat1 | ||
}} | }} |
Latest revision as of 17:04, 1 October 2015
Short description: | p4@Sat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000026318, ENSMUST00000152463_5end |
EntrezGene: | Sat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.18e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.18e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.70e-10 | 95 |
ectoderm | 7.70e-10 | 95 |
presumptive ectoderm | 7.70e-10 | 95 |
neurectoderm | 9.32e-10 | 64 |
neural plate | 9.32e-10 | 64 |
presumptive neural plate | 9.32e-10 | 64 |
central nervous system | 1.27e-09 | 73 |
ecto-epithelium | 1.85e-09 | 73 |
regional part of nervous system | 4.71e-09 | 54 |
nervous system | 6.68e-09 | 75 |
neural tube | 1.34e-08 | 52 |
neural rod | 1.34e-08 | 52 |
future spinal cord | 1.34e-08 | 52 |
neural keel | 1.34e-08 | 52 |
structure with developmental contribution from neural crest | 7.65e-08 | 92 |
brain | 5.60e-07 | 47 |
future brain | 5.60e-07 | 47 |
regional part of brain | 8.32e-07 | 46 |