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FFCP PHASE1:Mm9::chr18:74023269..74023302,+: Difference between revisions

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{{FFCP|EntrezGene=71263|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=0bp_to_ENSMUST00000139821_5end|description=CAGE_peak_2_at_Mro_5end|id=chr18:74023269..74023302,+|ontology_enrichment_celltype=CL:0000221!3.95e-09!44;CL:0000133!3.95e-09!44;CL:0002319!7.00e-09!43|ontology_enrichment_celltype_v019_2=CL:0000221,1.50e-07,44;CL:0000133,1.50e-07,44;CL:0002319,2.91e-07,43;CL:0002453,5.00e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.40e-23!73;UBERON:0005743!3.40e-23!73;UBERON:0000073!7.73e-22!75;UBERON:0001016!7.73e-22!75;UBERON:0001049!3.39e-18!52;UBERON:0005068!3.39e-18!52;UBERON:0006241!3.39e-18!52;UBERON:0007135!3.39e-18!52;UBERON:0000955!7.31e-17!50;UBERON:0006238!7.31e-17!50;UBERON:0002616!3.74e-16!49;UBERON:0004121!4.78e-15!102;UBERON:0000924!4.78e-15!102;UBERON:0006601!4.78e-15!102;UBERON:0002346!7.04e-14!71;UBERON:0003075!7.04e-14!71;UBERON:0007284!7.04e-14!71;UBERON:0000160!9.95e-14!43;UBERON:0000033!1.07e-13!63;UBERON:0002020!3.33e-12!34;UBERON:0003080!2.71e-11!40;UBERON:0002780!1.13e-10!39;UBERON:0001890!1.13e-10!39;UBERON:0006240!1.13e-10!39;UBERON:0002791!2.55e-09!29;UBERON:0003528!2.55e-09!29;UBERON:0001893!2.55e-09!29;UBERON:0003056!4.56e-09!49;UBERON:0005409!4.82e-09!59;UBERON:0003076!2.67e-08!12;UBERON:0003057!2.67e-08!12;UBERON:0002619!4.79e-07!17;UBERON:0000956!9.12e-07!21;UBERON:0001869!9.12e-07!21;UBERON:0000203!9.12e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.25e-23,73;UBERON:0001016,7.02e-22,75;UBERON:0000073,9.29e-20,54;UBERON:0001049,2.08e-18,52;UBERON:0005068,2.08e-18,52;UBERON:0006241,2.08e-18,52;UBERON:0007135,2.08e-18,52;UBERON:0002346,7.23e-15,64;UBERON:0003075,7.23e-15,64;UBERON:0007284,7.23e-15,64;UBERON:0000955,9.73e-15,47;UBERON:0006238,9.73e-15,47;UBERON:0004121,1.47e-14,95;UBERON:0000924,1.47e-14,95;UBERON:0006601,1.47e-14,95;UBERON:0002616,6.34e-14,46;UBERON:0010371,2.08e-12,73;UBERON:0000160,2.15e-12,31;UBERON:0002020,1.24e-11,34;UBERON:0003076,2.33e-10,12;UBERON:0003057,2.33e-10,12;UBERON:0003080,3.39e-10,40;UBERON:0002780,1.73e-09,39;UBERON:0001890,1.73e-09,39;UBERON:0006240,1.73e-09,39;UBERON:0011216,1.64e-08,194;UBERON:0003528,3.04e-08,29;UBERON:0002791,3.04e-08,29;UBERON:0001893,3.04e-08,29;UBERON:0002021,4.83e-07,10;UBERON:0000411,4.83e-07,10;UBERON:0001950,4.83e-07,10;UBERON:0003056,5.85e-07,49;UBERON:0002619,8.15e-07,17|phase1_expression=2.08193501236232,5.93258192986914,3.63999391511629,3.0246421130683,6.51164448930251,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,2.71987118748791,1.83527424853736,5.16808767703518,1.7230479846363,2.37018355954478,7.03086651988583,7.56090389279792,1.10865255327652,0,0,0,2.3108129580102,2.99222361645286,2.04169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,3.9119567217402,8.72100625521786,5.27246838562732,3.11087838518853,8.9591309840232,8.62515386189829,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,1.69422266034566,2.66788438833342,0,0,0,9.28760342607055,13.831858991576,0.414758449233911,0.405017814995072,0.420649922702764,11.7116903605559,12.8103753751936,0.734944795289724,0.766763768145891,0.919218786610021,8.8092704799511,6.63974158042976,7.0659005297872,1.31886287730194,0.914876436024097,1.04182674111352,6.42120897703176,8.4414391504752,9.16789486660861,12.6690291753677,8.82704420954438,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,0.91347103775248,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0,0.117588707135705,0.125666591329675,1.23597483867187,0,0.884610551949874,0,0,1.45462575940567,0,5.5628351432194,7.54008144528438,6.13096932500619,0,0,0,12.2828324311955,6.8625090422794,4.14659361972453,8.16974304903699,6.64860189058859,10.8049783170971,9.5722345209977,1.01839363850316,0.746441823660558,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0,0.204109497453984,0.640568601424249,0.562210347358373,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0,7.36014819974445,6.17427674275707,4.62586296177317,3.96675849995316,1.70630600428187,1.39342003116263,1.41754207454303,2.62188582010345,3.33567065767305,3.04361001780095,4.74529061544512,6.25856027951241,3.2673577144035,5.76973768919337,3.50935356814416,4.49409704327111,4.97117514711797,4.58024928485045,0.189667900953082,0.685491075658373,0,1.4255592949172,0.775809948670503,0.841629838683823,2.08680572510049,5.01874503130647,2.98297582898612,1.72756029490521,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,9.9541365792431,7.501547941901,0.163934945376675,0.252470927204373,1.89304931649754,1.95219372148319,2.15423397732799,0.477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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71263
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000139821_5end
|cluster_id=chr18:74023269..74023302,+
|description=CAGE_peak_2_at_Mro_5end
|id=chr18:74023269..74023302,+
|ontology_enrichment_celltype=CL:0000221!3.95e-09!44;CL:0000133!3.95e-09!44;CL:0002319!7.00e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000221,1.50e-07,44;CL:0000133,1.50e-07,44;CL:0002319,2.91e-07,43;CL:0002453,5.00e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.40e-23!73;UBERON:0005743!3.40e-23!73;UBERON:0000073!7.73e-22!75;UBERON:0001016!7.73e-22!75;UBERON:0001049!3.39e-18!52;UBERON:0005068!3.39e-18!52;UBERON:0006241!3.39e-18!52;UBERON:0007135!3.39e-18!52;UBERON:0000955!7.31e-17!50;UBERON:0006238!7.31e-17!50;UBERON:0002616!3.74e-16!49;UBERON:0004121!4.78e-15!102;UBERON:0000924!4.78e-15!102;UBERON:0006601!4.78e-15!102;UBERON:0002346!7.04e-14!71;UBERON:0003075!7.04e-14!71;UBERON:0007284!7.04e-14!71;UBERON:0000160!9.95e-14!43;UBERON:0000033!1.07e-13!63;UBERON:0002020!3.33e-12!34;UBERON:0003080!2.71e-11!40;UBERON:0002780!1.13e-10!39;UBERON:0001890!1.13e-10!39;UBERON:0006240!1.13e-10!39;UBERON:0002791!2.55e-09!29;UBERON:0003528!2.55e-09!29;UBERON:0001893!2.55e-09!29;UBERON:0003056!4.56e-09!49;UBERON:0005409!4.82e-09!59;UBERON:0003076!2.67e-08!12;UBERON:0003057!2.67e-08!12;UBERON:0002619!4.79e-07!17;UBERON:0000956!9.12e-07!21;UBERON:0001869!9.12e-07!21;UBERON:0000203!9.12e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.25e-23,73;UBERON:0001016,7.02e-22,75;UBERON:0000073,9.29e-20,54;UBERON:0001049,2.08e-18,52;UBERON:0005068,2.08e-18,52;UBERON:0006241,2.08e-18,52;UBERON:0007135,2.08e-18,52;UBERON:0002346,7.23e-15,64;UBERON:0003075,7.23e-15,64;UBERON:0007284,7.23e-15,64;UBERON:0000955,9.73e-15,47;UBERON:0006238,9.73e-15,47;UBERON:0004121,1.47e-14,95;UBERON:0000924,1.47e-14,95;UBERON:0006601,1.47e-14,95;UBERON:0002616,6.34e-14,46;UBERON:0010371,2.08e-12,73;UBERON:0000160,2.15e-12,31;UBERON:0002020,1.24e-11,34;UBERON:0003076,2.33e-10,12;UBERON:0003057,2.33e-10,12;UBERON:0003080,3.39e-10,40;UBERON:0002780,1.73e-09,39;UBERON:0001890,1.73e-09,39;UBERON:0006240,1.73e-09,39;UBERON:0011216,1.64e-08,194;UBERON:0003528,3.04e-08,29;UBERON:0002791,3.04e-08,29;UBERON:0001893,3.04e-08,29;UBERON:0002021,4.83e-07,10;UBERON:0000411,4.83e-07,10;UBERON:0001950,4.83e-07,10;UBERON:0003056,5.85e-07,49;UBERON:0002619,8.15e-07,17
|phase1_expression=2.08193501236232,5.93258192986914,3.63999391511629,3.0246421130683,6.51164448930251,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,2.71987118748791,1.83527424853736,5.16808767703518,1.7230479846363,2.37018355954478,7.03086651988583,7.56090389279792,1.10865255327652,0,0,0,2.3108129580102,2.99222361645286,2.04169356262369,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,3.9119567217402,8.72100625521786,5.27246838562732,3.11087838518853,8.9591309840232,8.62515386189829,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,1.69422266034566,2.66788438833342,0,0,0,9.28760342607055,13.831858991576,0.414758449233911,0.405017814995072,0.420649922702764,11.7116903605559,12.8103753751936,0.734944795289724,0.766763768145891,0.919218786610021,8.8092704799511,6.63974158042976,7.0659005297872,1.31886287730194,0.914876436024097,1.04182674111352,6.42120897703176,8.4414391504752,9.16789486660861,12.6690291753677,8.82704420954438,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,0.91347103775248,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0,0.117588707135705,0.125666591329675,1.23597483867187,0,0.884610551949874,0,0,1.45462575940567,0,5.5628351432194,7.54008144528438,6.13096932500619,0,0,0,12.2828324311955,6.8625090422794,4.14659361972453,8.16974304903699,6.64860189058859,10.8049783170971,9.5722345209977,1.01839363850316,0.746441823660558,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0,0.204109497453984,0.640568601424249,0.562210347358373,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0,7.36014819974445,6.17427674275707,4.62586296177317,3.96675849995316,1.70630600428187,1.39342003116263,1.41754207454303,2.62188582010345,3.33567065767305,3.04361001780095,4.74529061544512,6.25856027951241,3.2673577144035,5.76973768919337,3.50935356814416,4.49409704327111,4.97117514711797,4.58024928485045,0.189667900953082,0.685491075658373,0,1.4255592949172,0.775809948670503,0.841629838683823,2.08680572510049,5.01874503130647,2.98297582898612,1.72756029490521,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,9.9541365792431,7.501547941901,0.163934945376675,0.252470927204373,1.89304931649754,1.95219372148319,2.15423397732799,0.477937595905104,0.222798674082394,0.566153061577665,1.21443210502468,0.292255857911312,0.790575555893047,14.4594592389813,2.98074178937364,0.712262414669021,0.325773918707152,0.989820737835213,9.2921596837974,0.485561272309963,0.302323556964751,2.45186603682668,3.83892460745005,3.99665692327106,1.55056975900933,2.90826983582004,1.78248689192361,8.53299246426703,8.4334886859999,11.3449097573006,0,0.540183282093931,2.71653235943784,2.14337035031592,2.12808280370728,1.96205699362278,1.31639216481697,0.913394847343798,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.596861720015682,0.164140899745061,3.78925087618806,9.45669040253599,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.949007980743406,0.406638934253697,0.540026704109006,0.418176592028937,0.87345025498471,0.134864346384821,0.165306911450672,0.523511883968059,2.85152941241944,0,0,0.299033092087958,0.165458490457098,1.94451188344048,0.774958940866387,1.01373675294467,1.99507305697782,1.5624526181274,1.8874681996628,0,0,0,0,0.308132871494482,0.25984164595559,1.07416017400489,0.39736270956253,0.360586348559907,0.295379054349154,0.201932899896295,0.304827226619999,0,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,1.50471631210609,7.90652579663893,5.52390283808612,7.44764167471216,7.73339320546594,2.74033007908257,4.5323633843382,4.72515750162264,4.5032120322422,4.98456649882625,3.10656187051092,0.518936737920883,1.59609949360412,0.170733605754134,0.972426868273176,1.04806581313991,0.183843508450014,1.11123363900808,0.824140228955577,0,1.01078884705519,0.760437899670719,0.943131706930381,0.561849044819294,1.60062881012173,0.861532034334199,0.952587382566147,1.15884325944855,0.77163688185482,0.824171801606613,1.32479028120958,0.342869252385415,0.70990322463735,0.715308569841963,1.30811774969096,1.2234219453993,1.26921911837515,0.548783918618318,1.8414879800649,1.22223702461276,0.561142271657738,0.474540072496697,1.37906275325789,0.409231043169689,1.23949472948773,0.771626443924566,0.499621155875892,0.701794825336225,0.859484216193193,0.191288332068843,1.32354851471709,0.231867835620421
|short_description=p2@Mro
}}

Latest revision as of 17:14, 1 October 2015

Short description:p2@Mro
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mro_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: 0bp_to_ENSMUST00000139821_5end
EntrezGene:Mro
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mro

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B97.03
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.28
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G16.17
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.50e-0744
neurectodermal cell1.50e-0744
neural cell2.91e-0743
oligodendrocyte precursor cell5.00e-078

Uber anatomy
Ontology termp-valuen
central nervous system4.25e-2373
nervous system7.02e-2275
regional part of nervous system9.29e-2054
neural tube2.08e-1852
neural rod2.08e-1852
future spinal cord2.08e-1852
neural keel2.08e-1852
neurectoderm7.23e-1564
neural plate7.23e-1564
presumptive neural plate7.23e-1564
brain9.73e-1547
future brain9.73e-1547
ectoderm-derived structure1.47e-1495
ectoderm1.47e-1495
presumptive ectoderm1.47e-1495
regional part of brain6.34e-1446
ecto-epithelium2.08e-1273
intestine2.15e-1231
gray matter1.24e-1134
posterior neural tube2.33e-1012
chordal neural plate2.33e-1012
anterior neural tube3.39e-1040
regional part of forebrain1.73e-0939
forebrain1.73e-0939
future forebrain1.73e-0939
organ system subdivision1.64e-08194
brain grey matter3.04e-0829
regional part of telencephalon3.04e-0829
telencephalon3.04e-0829
occipital lobe4.83e-0710
visual cortex4.83e-0710
neocortex4.83e-0710
pre-chordal neural plate5.85e-0749
regional part of cerebral cortex8.15e-0717
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