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FFCP PHASE1:Mm9::chr5:115879594..115879622,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:115879594..115879622,+
|DHSsupport=NA
|short_description=p2@Msi1
|DPIdataset=NA
|description=CAGE_peak_2_at_Msi1_5end
|association_with_transcript=0bp_to_ENSMUST00000150779_5end
|EntrezGene=17690
|EntrezGene=17690
|HGNC=
|HGNC=
|MCL_coexpression_id=100
|TSSclassifier=NA
|UniProt=Q61474
|UniProt=Q61474
|association_with_transcript=0bp_to_ENSMUST00000150779_5end
|cluster_id=chr5:115879594..115879622,+
|description=CAGE_peak_2_at_Msi1_5end
|id=chr5:115879594..115879622,+
|ontology_enrichment_celltype=CL:0000221!9.55e-18!44;CL:0000133!9.55e-18!44;CL:0002319!2.07e-17!43;CL:0000540!2.43e-15!33;CL:0000047!2.43e-15!33;CL:0000031!2.43e-15!33;CL:0000404!2.43e-15!33;CL:0000117!1.88e-14!23;CL:0000337!1.88e-14!23;CL:0000055!3.25e-13!50;CL:0000393!1.17e-11!39;CL:0000211!1.17e-11!39;CL:0002321!1.61e-07!70;CL:0000220!1.61e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000221,1.67e-23,44;CL:0000133,1.67e-23,44;CL:0002319,6.24e-23,43;CL:0000117,9.02e-23,23;CL:0000337,9.02e-23,23;CL:0000540,1.29e-20,33;CL:0000047,1.29e-20,33;CL:0000031,1.29e-20,33;CL:0000404,1.29e-20,33;CL:0000393,5.17e-16,39;CL:0000211,5.17e-16,39;CL:0002321,2.82e-12,70;CL:0002609,5.92e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.77e-23!73;UBERON:0005743!7.77e-23!73;UBERON:0004121!1.01e-22!102;UBERON:0000924!1.01e-22!102;UBERON:0006601!1.01e-22!102;UBERON:0000073!1.46e-22!75;UBERON:0001016!1.46e-22!75;UBERON:0002346!3.16e-19!71;UBERON:0003075!3.16e-19!71;UBERON:0007284!3.16e-19!71;UBERON:0000033!2.35e-17!63;UBERON:0001049!2.42e-16!52;UBERON:0005068!2.42e-16!52;UBERON:0006241!2.42e-16!52;UBERON:0007135!2.42e-16!52;UBERON:0003056!3.37e-15!49;UBERON:0000955!1.14e-14!50;UBERON:0006238!1.14e-14!50;UBERON:0002616!2.02e-14!49;UBERON:0003080!7.33e-12!40;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0002020!5.66e-10!34;UBERON:0000153!5.22e-08!94;UBERON:0007811!9.98e-08!86;UBERON:0002791!1.80e-07!29;UBERON:0003528!1.80e-07!29;UBERON:0001893!1.80e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.19e-25,73;UBERON:0001016,1.51e-24,75;UBERON:0004121,6.72e-24,95;UBERON:0000924,6.72e-24,95;UBERON:0006601,6.72e-24,95;UBERON:0002346,3.87e-21,64;UBERON:0003075,3.87e-21,64;UBERON:0007284,3.87e-21,64;UBERON:0000073,5.78e-20,54;UBERON:0010371,7.29e-19,73;UBERON:0001049,1.46e-18,52;UBERON:0005068,1.46e-18,52;UBERON:0006241,1.46e-18,52;UBERON:0007135,1.46e-18,52;UBERON:0003056,1.81e-17,49;UBERON:0003080,1.75e-14,40;UBERON:0002616,7.77e-14,46;UBERON:0002780,9.09e-14,39;UBERON:0001890,9.09e-14,39;UBERON:0006240,9.09e-14,39;UBERON:0000955,2.41e-13,47;UBERON:0006238,2.41e-13,47;UBERON:0002020,7.92e-13,34;UBERON:0010314,3.45e-12,92;UBERON:0003528,7.09e-09,29;UBERON:0002791,7.09e-09,29;UBERON:0001893,7.09e-09,29;UBERON:0001954,8.68e-09,7;UBERON:0003022,8.68e-09,7;UBERON:0002421,8.68e-09,7;UBERON:0000349,8.68e-09,7;UBERON:0002600,8.68e-09,7;UBERON:0000007,2.32e-08,8;UBERON:0003296,2.32e-08,8;UBERON:0010133,2.32e-08,8
|phase1_expression=1.44133962394315,0,0,0,0,1.84667199103079,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,1.07735616342945,0,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,6.1047043786525,3.29529274101708,2.13872888981712,1.39986421625363,0,0,0,0,0,0.573066879877513,0,10.7227724255587,5.81890077199236,8.23980824558033,0.677689064138264,0,0,0,0,3.29560121570245,4.2264013585371,18.0419925416751,14.5806413398226,14.5124223332454,2.57085885963423,1.32521124570968,12.6165523191403,14.3768206527355,10.1114066527102,1.10115880999389,1.65993539510744,1.84327839907492,9.62769900430415,10.5210790142771,8.33461392890816,2.23346399201105,0.56276261003168,1.83357897332172,3.53554302568401,3.55929201997757,7.08317894136142,0.151452386666368,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0.628332956648377,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,5.52879149296603,0.521472960576829,0.511430914660661,0.83115217823824,0.486723789203273,0.509196819251581,0.373220911830279,0,0.420883711772948,1.82168620147785,0.919608417733892,1.98068342785884,0.90422890701429,3.40182495756639,1.66547836370305,2.34254311399322,2.06962696591213,0.862271971731369,1.51284864134255,1.05570674498369,1.7535658594206,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,1.68231958851302,6.27718135513635,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.667134131534611,0.380451252225118,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.758671603812327,0.571242563048644,2.25415471346161,0,0.969762435838129,0.771494018793504,0.189709611372772,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,1.62964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.551873492609465,1.44495530989013,0.703270119553219,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,2.00518806674155,1.41538265394416,0.404810701674894,1.75353514746787,0.395287777946524,0.963963949265421,0.283880170416537,0.534196811001766,0.977321756121456,0.494910368917606,0,0.728341908464944,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,1.06949213515416,0,0,0,3.74483566329167,1.62054984628179,2.06973894052407,2.35770738534752,4.07882537377229,1.78368817602071,1.64549020602121,2.43571959291679,0,0,0,0,0.322928853391811,0.542816324353403,0.716234064018819,0.656563598980245,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.790839983952838,1.42323626988794,0.540026704109006,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,0,0.747582730219894,0.827292452285488,1.36115831840833,1.29159823477731,0.844780627453891,1.29092962510329,3.25510962109875,2.41176492179135,1.44950472495604,0.288030006257865,0,0.810900861160657,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0.549454872801795,0.643105137237198,0,0.564751842617067,0,0.572895513439397,1.20297227640581,0,0,0,0.45032120322422,0.906284817968409,0.51776031175182,2.28332164685189,2.39414924040619,1.87806966329548,0.729320151204882,1.25767897576789,1.10306105070008,1.55572709461131,0.824140228955577,1.28367683836726,1.26348605881899,0.760437899670719,0.754505365544305,1.31098110457835,1.08842759088278,1.66562859971278,0.952587382566147,1.85414921511769,0.964546102318525,1.23625770240992,0.147198920134397,0.342869252385415,0.532427418478012,1.1921809497366,0.436039249896986,0.470546902076653,0.423073039458382,0.914639864363863,0,0.814824683075171,1.68342681497322,0.830445126869219,0.689531376628944,1.63692417267876,1.54936841185966,0.964533054905707,2.24829520144151,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0
|phase1_expression=1.44133962394315,0,0,0,0,1.84667199103079,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,1.07735616342945,0,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,6.1047043786525,3.29529274101708,2.13872888981712,1.39986421625363,0,0,0,0,0,0.573066879877513,0,10.7227724255587,5.81890077199236,8.23980824558033,0.677689064138264,0,0,0,0,3.29560121570245,4.2264013585371,18.0419925416751,14.5806413398226,14.5124223332454,2.57085885963423,1.32521124570968,12.6165523191403,14.3768206527355,10.1114066527102,1.10115880999389,1.65993539510744,1.84327839907492,9.62769900430415,10.5210790142771,8.33461392890816,2.23346399201105,0.56276261003168,1.83357897332172,3.53554302568401,3.55929201997757,7.08317894136142,0.151452386666368,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0.628332956648377,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,5.52879149296603,0.521472960576829,0.511430914660661,0.83115217823824,0.486723789203273,0.509196819251581,0.373220911830279,0,0.420883711772948,1.82168620147785,0.919608417733892,1.98068342785884,0.90422890701429,3.40182495756639,1.66547836370305,2.34254311399322,2.06962696591213,0.862271971731369,1.51284864134255,1.05570674498369,1.7535658594206,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,1.68231958851302,6.27718135513635,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.667134131534611,0.380451252225118,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.758671603812327,0.571242563048644,2.25415471346161,0,0.969762435838129,0.771494018793504,0.189709611372772,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,1.62964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.551873492609465,1.44495530989013,0.703270119553219,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,2.00518806674155,1.41538265394416,0.404810701674894,1.75353514746787,0.395287777946524,0.963963949265421,0.283880170416537,0.534196811001766,0.977321756121456,0.494910368917606,0,0.728341908464944,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,1.06949213515416,0,0,0,3.74483566329167,1.62054984628179,2.06973894052407,2.35770738534752,4.07882537377229,1.78368817602071,1.64549020602121,2.43571959291679,0,0,0,0,0.322928853391811,0.542816324353403,0.716234064018819,0.656563598980245,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.790839983952838,1.42323626988794,0.540026704109006,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0,0,0,0,0.747582730219894,0.827292452285488,1.36115831840833,1.29159823477731,0.844780627453891,1.29092962510329,3.25510962109875,2.41176492179135,1.44950472495604,0.288030006257865,0,0.810900861160657,0.308132871494482,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0.549454872801795,0.643105137237198,0,0.564751842617067,0,0.572895513439397,1.20297227640581,0,0,0,0.45032120322422,0.906284817968409,0.51776031175182,2.28332164685189,2.39414924040619,1.87806966329548,0.729320151204882,1.25767897576789,1.10306105070008,1.55572709461131,0.824140228955577,1.28367683836726,1.26348605881899,0.760437899670719,0.754505365544305,1.31098110457835,1.08842759088278,1.66562859971278,0.952587382566147,1.85414921511769,0.964546102318525,1.23625770240992,0.147198920134397,0.342869252385415,0.532427418478012,1.1921809497366,0.436039249896986,0.470546902076653,0.423073039458382,0.914639864363863,0,0.814824683075171,1.68342681497322,0.830445126869219,0.689531376628944,1.63692417267876,1.54936841185966,0.964533054905707,2.24829520144151,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0
|short_description=p2@Msi1
}}
}}

Latest revision as of 17:23, 1 October 2015

Short description:p2@Msi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Msi1_5end
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: 0bp_to_ENSMUST00000150779_5end
EntrezGene:Msi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Msi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.19e-2573
nervous system1.51e-2475
ectoderm-derived structure6.72e-2495
ectoderm6.72e-2495
presumptive ectoderm6.72e-2495
neurectoderm3.87e-2164
neural plate3.87e-2164
presumptive neural plate3.87e-2164
regional part of nervous system5.78e-2054
ecto-epithelium7.29e-1973
neural tube1.46e-1852
neural rod1.46e-1852
future spinal cord1.46e-1852
neural keel1.46e-1852
pre-chordal neural plate1.81e-1749
anterior neural tube1.75e-1440
regional part of brain7.77e-1446
regional part of forebrain9.09e-1439
forebrain9.09e-1439
future forebrain9.09e-1439
brain2.41e-1347
future brain2.41e-1347
gray matter7.92e-1334
structure with developmental contribution from neural crest3.45e-1292
brain grey matter7.09e-0929
regional part of telencephalon7.09e-0929
telencephalon7.09e-0929
Ammon's horn8.68e-097
lobe parts of cerebral cortex8.68e-097
hippocampal formation8.68e-097
limbic system8.68e-097
limbic lobe8.68e-097
pituitary gland2.32e-088
gland of diencephalon2.32e-088
neuroendocrine gland2.32e-088
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