FFCP PHASE1:Mm9::chr6:72494405..72494443,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12332 | |EntrezGene=12332 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q99LB4 | |UniProt=Q99LB4 | ||
|association_with_transcript=0bp_to_NM_007599,uc009cis.1_5end | |association_with_transcript=0bp_to_NM_007599,uc009cis.1_5end | ||
|cluster_id=chr6:72494405..72494443,+ | |||
|description=CAGE_peak_2_at_Capg_5end | |description=CAGE_peak_2_at_Capg_5end | ||
|id=chr6:72494405..72494443,+ | |id=chr6:72494405..72494443,+ | ||
|ontology_enrichment_celltype=CL:0000219!1.83e-10!54;CL:0000333!4.21e-07!10;CL:0000095!4.21e-07!10;CL:0000243!4.21e-07!10;CL:0000123!4.21e-07!10;CL:0000125!4.21e-07!10;CL:0000030!4.21e-07!10;CL:0000339!4.21e-07!10 | |ontology_enrichment_celltype=CL:0000219!1.83e-10!54;CL:0000333!4.21e-07!10;CL:0000095!4.21e-07!10;CL:0000243!4.21e-07!10;CL:0000123!4.21e-07!10;CL:0000125!4.21e-07!10;CL:0000030!4.21e-07!10;CL:0000339!4.21e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.20e-10,54;CL:0000333,3.96e-07,10;CL:0000095,3.96e-07,10;CL:0000243,3.96e-07,10;CL:0000123,3.96e-07,10;CL:0000125,3.96e-07,10;CL:0000030,3.96e-07,10;CL:0000339,3.96e-07,10;CL:0002320,8.32e-07,46;CL:0000134,8.32e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.81e-08!193;UBERON:0004120!1.81e-08!193;UBERON:0006603!1.81e-08!193;UBERON:0002204!3.69e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.48e-07,32;UBERON:0000926,7.72e-07,120;UBERON:0004120,7.72e-07,120;UBERON:0006603,7.72e-07,120;UBERON:0002384,8.32e-07,46 | |||
|phase1_expression=6.88640042550614,0.348975407639361,0,0,0,0.503637815735669,0.700837921786577,16.9151553708465,6.335492496825,9.83071010552373,10.9579499664323,5.18519033469687,9.58724087614752,6.90621179110079,1.66554880907831,4.25198061518635,2.79824751251259,9.62159604342625,10.0093536532189,6.36584477697045,5.78294373027274,24.4255739954178,32.6499736423669,3.51983330145495,3.44113921600755,0.57423196411502,0.430761996159075,0.646413698057667,0,0.252030129759931,0.221730510655305,5.71527606113668,11.0711661765223,0,0.288851619751275,0.166234645358492,0.408338712524738,20.9265815368454,18.7520482685712,17.7998072951091,19.4116391050235,25.2726829434625,15.0508209439658,20.1434908760924,22.8098095243908,21.4749700029167,27.3836970521814,48.83763502922,22.1883044561817,26.8313260722511,43.8157499687385,46.0008205967909,12.080347636157,8.70434570413613,5.37750078627942,30.6138728882777,21.4900079954068,14.4388185837684,0.404632921719196,0,0.633831403506179,24.7356508410466,34.6824970483344,34.1961892566932,21.7550599764734,25.5772841380596,15.579205746957,31.890119341689,0,0.405017814995072,0.630974884054146,1.14260393761521,4.63823935998388,0.244981598429908,0.670918297127655,0,0,0.127687338085188,0.46081959976873,0.527545150920775,0.274462930807229,1.04182674111352,0.279182999001381,1.12552522006336,0.30559649555362,2.06240009831567,0.996601765593721,1.3047961207771,48.0104065732387,73.7578426642227,12.4641730141721,0,1.3599426674155,0.539703191637817,0.649776417447669,0,4.0728881838208,21.9855116125695,28.8362465109184,31.4472221314203,19.0138616698519,26.9485602570067,7.64415719119937,0,52.8238140067362,48.1383744402687,47.0137733863748,3.19714863213368,5.69663344023778,18.8521516612327,8.15381035800839,9.74289530598852,11.0695438682908,15.5244319769201,15.7568867561844,10.9329934456818,7.66304399976559,4.62717942143717,3.5384422077995,2.75003644910596,3.97514733228708,1.45462575940567,1.86391761218122,1.75668478206928,1.04723353406728,3.0654846625031,36.5436129743057,31.1949420116572,29.8615033621702,0.599162557619291,0.915001205637253,0.125654352112864,0.173824320192276,1.27857728665165,1.24672826735736,0.973447578406546,13.9519928474933,12.8139179728396,38.6665820403522,2.94618598241064,0.910843100738926,1.37941262660084,3.06105620669094,3.16480117455002,3.26575195926374,1.40925092313335,2.24884138943349,3.10444044886819,1.29340795759705,1.70195472151037,2.63926686245923,5.47989331068937,3.05851974148158,7.66154766348766,9.87754254758129,6.56813080501028,20.3641824320838,23.6760074545538,26.4272054437901,2.69263504296152,3.28336483973535,3.24111710629827,2.84093682702252,4.52557733019029,3.23960937063494,3.25547522650571,3.48755421819505,4.2035523252181,2.96207729844265,2.62667942526552,2.75633952455909,2.33919979880532,3.29325172936576,4.83143107537338,0.630869845692382,0.823236899034275,0,0.528901133327089,2.13288250535234,3.0190767341857,2.83508414908605,2.21851877085677,2.00140239460383,3.23383564391351,1.42358718463353,5.59976446061637,2.26201687920243,4.17808591286417,2.53453313254856,0,2.59365659849633,2.19055400579804,8.91439134479484,5.1411830674378,4.50830942692322,6.10953983535943,10.4734343070518,12.4140401205864,9.86489979138414,7.97094799089852,7.69293766422737,9.99517027766584,0.296452627087149,1.33476084572875,2.55526693647164,1.79889689907883,0.405720242777006,2.41177159752417,3.05551022137704,2.5892652370573,3.72911021582581,1.37280706594041,2.87536413054709,2.23284568601102,1.24815069245824,2.27320990152401,0.538192240565737,1.92977408545347,6.65111484599777,3.03186258832776,5.21487924614483,2.8856664581782,5.39787571063555,11.8929442783689,13.5684875305028,20.8793003207845,6.77831119656621,7.30833475840957,7.01600982092943,8.35702905050264,4.66249451037918,10.7040303350319,49.7611236999598,13.5976420954677,4.91764273019036,10.7615331058846,1.76605648986571,2.46144541843627,7.54100748732707,4.79694761688309,3.15508219416257,4.29482618726302,2.58508077279359,27.0034741686384,24.7306528231457,17.5507449089076,16.5972387686707,21.6269334854371,15.8115111178609,0,12.7746076687442,10.8620018237026,13.5196176263468,13.3625799607754,2.65490276679926,5.58395463156457,7.55808892411878,4.33791683438566,8.26845300066164,10.1453598821496,12.9214146584111,9.08834323693764,7.84294232446387,4.42451461110142,4.21674434299995,5.15677716240934,6.46835250932197,2.70091641046965,4.13947788104814,6.21577401591618,4.43350584105684,4.10248280484762,5.75921572107423,19.4857567433344,18.3043932289694,6.14313005505079,4.41056796109924,11.3771514529621,18.0840157899414,7.35817684123501,11.1016279922917,9.19189038572343,2.33184669303881,1.48340241608408,4.44264290074417,10.3193433981611,7.03739204004904,3.01389531207506,2.87057878214153,2.74533807847827,51.673442718132,56.1205323817869,46.9879910935041,15.2747298882418,4.11236791655476,6.30290348093231,7.99239522081329,9.82714991268003,9.17122767733946,7.8221320903196,10.1663750542163,11.5172614472973,3.88844919875379,3.72803587852155,0,5.08356256549528,3.30916980914195,3.11121901350476,7.4912697617084,6.58928889414035,8.09764946655702,4.9477666240701,3.14578033277133,0.966336483304024,2.30424005006292,1.58005560314089,6.89265731986558,5.44368072973584,2.85825810551149,2.32734704367726,2.18549490259391,3.846254384639,2.95379054349154,2.01932899896295,2.209997392995,2.11734988787365,3.02119430293232,1.92423683280659,3.27255326108393,12.923631866067,3.7737612073591,2.24284641523689,6.04384618910682,22.7963720957985,26.2755465631655,24.9086209003481,28.5109944175158,58.6839361721375,0.564751842617067,0,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0.726511433089237,1.59609949360412,0.853668028770671,1.94485373654635,3.77303692730368,2.94149613520023,3.11145418922261,3.91466608753899,2.56735367673452,2.52697211763797,5.57654459758527,5.65879024158229,2.99652823903624,2.81710670581425,2.81433797882505,5.23923060411381,4.40360438590451,4.43691207066522,3.29668720642645,4.56316652416632,4.11443102862498,4.43689515398344,3.09967046931517,3.77900683244054,2.91739079287525,2.876896668317,2.74391959309159,3.94604567156764,3.53090695999241,6.17256498823512,4.1522256343461,2.9551344712669,4.91077251803627,3.25367366490529,5.5942917184531,5.24602213669686,8.18760629558929,7.73535794573874,9.56441660344217,6.17655973534643,3.94175320554716 | |phase1_expression=6.88640042550614,0.348975407639361,0,0,0,0.503637815735669,0.700837921786577,16.9151553708465,6.335492496825,9.83071010552373,10.9579499664323,5.18519033469687,9.58724087614752,6.90621179110079,1.66554880907831,4.25198061518635,2.79824751251259,9.62159604342625,10.0093536532189,6.36584477697045,5.78294373027274,24.4255739954178,32.6499736423669,3.51983330145495,3.44113921600755,0.57423196411502,0.430761996159075,0.646413698057667,0,0.252030129759931,0.221730510655305,5.71527606113668,11.0711661765223,0,0.288851619751275,0.166234645358492,0.408338712524738,20.9265815368454,18.7520482685712,17.7998072951091,19.4116391050235,25.2726829434625,15.0508209439658,20.1434908760924,22.8098095243908,21.4749700029167,27.3836970521814,48.83763502922,22.1883044561817,26.8313260722511,43.8157499687385,46.0008205967909,12.080347636157,8.70434570413613,5.37750078627942,30.6138728882777,21.4900079954068,14.4388185837684,0.404632921719196,0,0.633831403506179,24.7356508410466,34.6824970483344,34.1961892566932,21.7550599764734,25.5772841380596,15.579205746957,31.890119341689,0,0.405017814995072,0.630974884054146,1.14260393761521,4.63823935998388,0.244981598429908,0.670918297127655,0,0,0.127687338085188,0.46081959976873,0.527545150920775,0.274462930807229,1.04182674111352,0.279182999001381,1.12552522006336,0.30559649555362,2.06240009831567,0.996601765593721,1.3047961207771,48.0104065732387,73.7578426642227,12.4641730141721,0,1.3599426674155,0.539703191637817,0.649776417447669,0,4.0728881838208,21.9855116125695,28.8362465109184,31.4472221314203,19.0138616698519,26.9485602570067,7.64415719119937,0,52.8238140067362,48.1383744402687,47.0137733863748,3.19714863213368,5.69663344023778,18.8521516612327,8.15381035800839,9.74289530598852,11.0695438682908,15.5244319769201,15.7568867561844,10.9329934456818,7.66304399976559,4.62717942143717,3.5384422077995,2.75003644910596,3.97514733228708,1.45462575940567,1.86391761218122,1.75668478206928,1.04723353406728,3.0654846625031,36.5436129743057,31.1949420116572,29.8615033621702,0.599162557619291,0.915001205637253,0.125654352112864,0.173824320192276,1.27857728665165,1.24672826735736,0.973447578406546,13.9519928474933,12.8139179728396,38.6665820403522,2.94618598241064,0.910843100738926,1.37941262660084,3.06105620669094,3.16480117455002,3.26575195926374,1.40925092313335,2.24884138943349,3.10444044886819,1.29340795759705,1.70195472151037,2.63926686245923,5.47989331068937,3.05851974148158,7.66154766348766,9.87754254758129,6.56813080501028,20.3641824320838,23.6760074545538,26.4272054437901,2.69263504296152,3.28336483973535,3.24111710629827,2.84093682702252,4.52557733019029,3.23960937063494,3.25547522650571,3.48755421819505,4.2035523252181,2.96207729844265,2.62667942526552,2.75633952455909,2.33919979880532,3.29325172936576,4.83143107537338,0.630869845692382,0.823236899034275,0,0.528901133327089,2.13288250535234,3.0190767341857,2.83508414908605,2.21851877085677,2.00140239460383,3.23383564391351,1.42358718463353,5.59976446061637,2.26201687920243,4.17808591286417,2.53453313254856,0,2.59365659849633,2.19055400579804,8.91439134479484,5.1411830674378,4.50830942692322,6.10953983535943,10.4734343070518,12.4140401205864,9.86489979138414,7.97094799089852,7.69293766422737,9.99517027766584,0.296452627087149,1.33476084572875,2.55526693647164,1.79889689907883,0.405720242777006,2.41177159752417,3.05551022137704,2.5892652370573,3.72911021582581,1.37280706594041,2.87536413054709,2.23284568601102,1.24815069245824,2.27320990152401,0.538192240565737,1.92977408545347,6.65111484599777,3.03186258832776,5.21487924614483,2.8856664581782,5.39787571063555,11.8929442783689,13.5684875305028,20.8793003207845,6.77831119656621,7.30833475840957,7.01600982092943,8.35702905050264,4.66249451037918,10.7040303350319,49.7611236999598,13.5976420954677,4.91764273019036,10.7615331058846,1.76605648986571,2.46144541843627,7.54100748732707,4.79694761688309,3.15508219416257,4.29482618726302,2.58508077279359,27.0034741686384,24.7306528231457,17.5507449089076,16.5972387686707,21.6269334854371,15.8115111178609,0,12.7746076687442,10.8620018237026,13.5196176263468,13.3625799607754,2.65490276679926,5.58395463156457,7.55808892411878,4.33791683438566,8.26845300066164,10.1453598821496,12.9214146584111,9.08834323693764,7.84294232446387,4.42451461110142,4.21674434299995,5.15677716240934,6.46835250932197,2.70091641046965,4.13947788104814,6.21577401591618,4.43350584105684,4.10248280484762,5.75921572107423,19.4857567433344,18.3043932289694,6.14313005505079,4.41056796109924,11.3771514529621,18.0840157899414,7.35817684123501,11.1016279922917,9.19189038572343,2.33184669303881,1.48340241608408,4.44264290074417,10.3193433981611,7.03739204004904,3.01389531207506,2.87057878214153,2.74533807847827,51.673442718132,56.1205323817869,46.9879910935041,15.2747298882418,4.11236791655476,6.30290348093231,7.99239522081329,9.82714991268003,9.17122767733946,7.8221320903196,10.1663750542163,11.5172614472973,3.88844919875379,3.72803587852155,0,5.08356256549528,3.30916980914195,3.11121901350476,7.4912697617084,6.58928889414035,8.09764946655702,4.9477666240701,3.14578033277133,0.966336483304024,2.30424005006292,1.58005560314089,6.89265731986558,5.44368072973584,2.85825810551149,2.32734704367726,2.18549490259391,3.846254384639,2.95379054349154,2.01932899896295,2.209997392995,2.11734988787365,3.02119430293232,1.92423683280659,3.27255326108393,12.923631866067,3.7737612073591,2.24284641523689,6.04384618910682,22.7963720957985,26.2755465631655,24.9086209003481,28.5109944175158,58.6839361721375,0.564751842617067,0,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0.726511433089237,1.59609949360412,0.853668028770671,1.94485373654635,3.77303692730368,2.94149613520023,3.11145418922261,3.91466608753899,2.56735367673452,2.52697211763797,5.57654459758527,5.65879024158229,2.99652823903624,2.81710670581425,2.81433797882505,5.23923060411381,4.40360438590451,4.43691207066522,3.29668720642645,4.56316652416632,4.11443102862498,4.43689515398344,3.09967046931517,3.77900683244054,2.91739079287525,2.876896668317,2.74391959309159,3.94604567156764,3.53090695999241,6.17256498823512,4.1522256343461,2.9551344712669,4.91077251803627,3.25367366490529,5.5942917184531,5.24602213669686,8.18760629558929,7.73535794573874,9.56441660344217,6.17655973534643,3.94175320554716 | ||
|short_description=p2@Capg | |short_description=p2@Capg | ||
}} | }} |
Latest revision as of 17:36, 1 October 2015
Short description: | p2@Capg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Capg_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_007599, uc009cis.1_5end |
EntrezGene: | Capg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.20e-10 | 54 |
migratory neural crest cell | 3.96e-07 | 10 |
neuron associated cell | 3.96e-07 | 10 |
glial cell (sensu Vertebrata) | 3.96e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.96e-07 | 10 |
glial cell | 3.96e-07 | 10 |
glioblast | 3.96e-07 | 10 |
glioblast (sensu Vertebrata) | 3.96e-07 | 10 |
connective tissue cell | 8.32e-07 | 46 |
mesenchymal cell | 8.32e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.48e-07 | 32 |
mesoderm | 7.72e-07 | 120 |
mesoderm-derived structure | 7.72e-07 | 120 |
presumptive mesoderm | 7.72e-07 | 120 |
connective tissue | 8.32e-07 | 46 |