FFCP PHASE1:Mm9::chr13:52678134..52678149,+: Difference between revisions
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{{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=18|UniProt=P48025|association_with_transcript=-392bp_to_ENSMUST00000120135_5end|description=CAGE_peak_15_at_Syk_5end|id=chr13:52678134..52678149,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.77e-25,6;CL:0000556,1.77e-25,6;CL:0000050,5.44e-17,9;CL:0000839,9.55e-12,13;CL:0000763,1.59e-09,16;CL:0002027,5.92e-09,3;CL:0002006,5.92e-09,3;CL:0002024,5.92e-09,3;CL:0002031,1.56e-08,25;CL:0000049,5.33e-08,19;CL:0000945,1.20e-07,1;CL:0000236,1.20e-07,1;CL:0000826,1.20e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001474,8.12e-13,22;UBERON:0004765,8.12e-13,22;UBERON:0001434,8.12e-13,22;UBERON:0002204,3.85e-11,32;UBERON:0003887,1.21e-09,10;UBERON:0002106,1.58e-09,6;UBERON:0004457,1.58e-09,6;UBERON:0000042,1.58e-09,6;UBERON:0004854,1.58e-09,6;UBERON:0009034,1.58e-09,6;UBERON:0002095,1.58e-09,6;UBERON:0004782,1.58e-09,6;UBERON:0003281,1.58e-09,6;UBERON:0009664,1.58e-09,6;UBERON:0002296,1.58e-09,6;UBERON:0005602,1.58e-09,6;UBERON:0001179,1.58e-09,6;UBERON:0006293,1.58e-09,6;UBERON:0002371,1.59e-09,16;UBERON:0002193,4.05e-09,48;UBERON:0002405,4.05e-09,48;UBERON:0002390,8.37e-08,45;UBERON:0003061,8.37e-08,45;UBERON:0003081,6.33e-07,87;UBERON:0000029,8.26e-07,1;UBERON:0001097,8.26e-07,1;UBERON:0003968,8.26e-07,1;UBERON:0001467,8.26e-07,1|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,3.33109761815663,3.23960427823721,0,10.8834447048592,11.9289557236993,9.76096199135469,0,0.695036658406197,0.261199789138935,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,14.5970867270231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0.289198713839823,1.76922110389975,0,1.54589062922275,0.484875253135222,0,0,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0,1.36847667671102,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,1.62135226775035,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.492422699235184,0.582961673259701,0,3.41741761595705,0.206386867963223,0.185194527369712,0.565105371014073,2.87057878214153,1.83022538565218,0.169978429993855,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p15@Syk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20963 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=P48025 | |||
|association_with_transcript=-392bp_to_ENSMUST00000120135_5end | |||
|cluster_id=chr13:52678134..52678149,+ | |||
|description=CAGE_peak_15_at_Syk_5end | |||
|id=chr13:52678134..52678149,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.77e-25,6;CL:0000556,1.77e-25,6;CL:0000050,5.44e-17,9;CL:0000839,9.55e-12,13;CL:0000763,1.59e-09,16;CL:0002027,5.92e-09,3;CL:0002006,5.92e-09,3;CL:0002024,5.92e-09,3;CL:0002031,1.56e-08,25;CL:0000049,5.33e-08,19;CL:0000945,1.20e-07,1;CL:0000236,1.20e-07,1;CL:0000826,1.20e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,8.12e-13,22;UBERON:0004765,8.12e-13,22;UBERON:0001434,8.12e-13,22;UBERON:0002204,3.85e-11,32;UBERON:0003887,1.21e-09,10;UBERON:0002106,1.58e-09,6;UBERON:0004457,1.58e-09,6;UBERON:0000042,1.58e-09,6;UBERON:0004854,1.58e-09,6;UBERON:0009034,1.58e-09,6;UBERON:0002095,1.58e-09,6;UBERON:0004782,1.58e-09,6;UBERON:0003281,1.58e-09,6;UBERON:0009664,1.58e-09,6;UBERON:0002296,1.58e-09,6;UBERON:0005602,1.58e-09,6;UBERON:0001179,1.58e-09,6;UBERON:0006293,1.58e-09,6;UBERON:0002371,1.59e-09,16;UBERON:0002193,4.05e-09,48;UBERON:0002405,4.05e-09,48;UBERON:0002390,8.37e-08,45;UBERON:0003061,8.37e-08,45;UBERON:0003081,6.33e-07,87;UBERON:0000029,8.26e-07,1;UBERON:0001097,8.26e-07,1;UBERON:0003968,8.26e-07,1;UBERON:0001467,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,3.33109761815663,3.23960427823721,0,10.8834447048592,11.9289557236993,9.76096199135469,0,0.695036658406197,0.261199789138935,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,14.5970867270231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0.289198713839823,1.76922110389975,0,1.54589062922275,0.484875253135222,0,0,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0,0,0,1.36847667671102,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,1.62135226775035,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.492422699235184,0.582961673259701,0,3.41741761595705,0.206386867963223,0.185194527369712,0.565105371014073,2.87057878214153,1.83022538565218,0.169978429993855,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p15@Syk | |||
}} |
Latest revision as of 17:36, 1 October 2015
Short description: | p15@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -392bp_to_ENSMUST00000120135_5end |
EntrezGene: | Syk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.77e-25 | 6 |
megakaryocyte | 1.77e-25 | 6 |
megakaryocyte-erythroid progenitor cell | 5.44e-17 | 9 |
myeloid lineage restricted progenitor cell | 9.55e-12 | 13 |
myeloid cell | 1.59e-09 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 5.92e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.92e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.92e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.56e-08 | 25 |
common myeloid progenitor | 5.33e-08 | 19 |
lymphocyte of B lineage | 1.20e-07 | 1 |
B cell | 1.20e-07 | 1 |
pro-B cell | 1.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone element | 8.12e-13 | 22 |
skeletal element | 8.12e-13 | 22 |
skeletal system | 8.12e-13 | 22 |
musculoskeletal system | 3.85e-11 | 32 |
intraembryonic coelom | 1.21e-09 | 10 |
spleen | 1.58e-09 | 6 |
cavity lining | 1.58e-09 | 6 |
serous membrane | 1.58e-09 | 6 |
gastrointestinal system mesentery | 1.58e-09 | 6 |
stomach region | 1.58e-09 | 6 |
mesentery | 1.58e-09 | 6 |
gastrointestinal system serosa | 1.58e-09 | 6 |
mesentery of stomach | 1.58e-09 | 6 |
gut mesentery | 1.58e-09 | 6 |
dorsal mesentery | 1.58e-09 | 6 |
dorsal mesogastrium | 1.58e-09 | 6 |
peritoneal cavity | 1.58e-09 | 6 |
spleen primordium | 1.58e-09 | 6 |
bone marrow | 1.59e-09 | 16 |
hemolymphoid system | 4.05e-09 | 48 |
immune system | 4.05e-09 | 48 |
hematopoietic system | 8.37e-08 | 45 |
blood island | 8.37e-08 | 45 |
lateral plate mesoderm | 6.33e-07 | 87 |
lymph node | 8.26e-07 | 1 |
axillary lymph node | 8.26e-07 | 1 |
peripheral lymph node | 8.26e-07 | 1 |
shoulder | 8.26e-07 | 1 |