FFCP PHASE1:Mm9::chr13:52692216..52692227,+: Difference between revisions
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{{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=18|UniProt=P48025|association_with_transcript=0bp_to_ENSMUST00000055087_5end|description=CAGE_peak_10_at_Syk_5end|id=chr13:52692216..52692227,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,9.47e-13,6;CL:0000556,9.47e-13,6;CL:0000839,1.53e-10,13;CL:0002031,4.83e-10,25;CL:0000050,2.31e-08,9;CL:0000763,2.32e-08,16;CL:0000988,2.04e-07,32;CL:0002032,2.04e-07,32;CL:0000037,2.04e-07,32;CL:0000837,2.04e-07,32;CL:0000049,7.15e-07,19;CL:0002476,9.88e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.79e-10!48;UBERON:0002405!5.66e-10!70;UBERON:0002390!3.78e-08!45;UBERON:0003061!3.78e-08!45;UBERON:0003081!4.53e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.57e-11,22;UBERON:0004765,2.57e-11,22;UBERON:0001434,2.57e-11,22;UBERON:0002193,1.04e-10,48;UBERON:0002405,1.04e-10,48;UBERON:0002465,1.37e-09,3;UBERON:0002371,2.32e-08,16;UBERON:0002106,3.72e-08,6;UBERON:0004457,3.72e-08,6;UBERON:0000042,3.72e-08,6;UBERON:0004854,3.72e-08,6;UBERON:0009034,3.72e-08,6;UBERON:0002095,3.72e-08,6;UBERON:0004782,3.72e-08,6;UBERON:0003281,3.72e-08,6;UBERON:0009664,3.72e-08,6;UBERON:0002296,3.72e-08,6;UBERON:0005602,3.72e-08,6;UBERON:0001179,3.72e-08,6;UBERON:0006293,3.72e-08,6;UBERON:0002204,3.52e-07,32;UBERON:0002390,4.62e-07,45;UBERON:0003061,4.62e-07,45;UBERON:0003887,4.94e-07,10;UBERON:0001962,8.14e-07,2;UBERON:0001961,8.14e-07,2;UBERON:0001744,8.14e-07,2|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,4.99664642723494,7.08663435864391,0,35.6472246854809,32.7703496317716,41.1657962244089,0.255129870453209,2.08510997521859,1.82839852397255,6.55968933452967,5.73523202667925,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,0,20.1339127269284,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,11.3932668804756,0.148442139064825,0,0,0,0,0.117588707135705,0,0,1.15679485535929,1.76922110389975,0.323533699894818,1.10420759230197,1.93950101254089,0,0,0,0.766371165625774,0.359445373517761,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,1.49288364732112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,1.3173006917463,0,0,0,0.991256348951394,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0.823684239564244,1.43768206527355,0,0.312037673114561,0.505157755894224,0.179397413521912,0.482443521363367,1.10851914099963,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,1.63863314715738,2.07221978239075,0.723245292907558,6.03165135757089,4.35124547054968,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,2.65490276679926,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.874442509889552,0,8.54354403989263,0,0.370389054739423,3.20226376907975,9.70529016819279,7.77845788902177,1.01987057996313,0.279902904647316,1.52019971184866,0,0,0,0.108005340821801,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0.810900861160657,0.513554785824136,1.55904987573354,0.179026695667481,0.993406773906324,0.120195449519969,0.738447635872886,0.201932899896295,0.228620419965,0.302478555410522,0,0.192423683280659,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p10@Syk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20963 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=P48025 | |||
|association_with_transcript=0bp_to_ENSMUST00000055087_5end | |||
|cluster_id=chr13:52692216..52692227,+ | |||
|description=CAGE_peak_10_at_Syk_5end | |||
|id=chr13:52692216..52692227,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.47e-13,6;CL:0000556,9.47e-13,6;CL:0000839,1.53e-10,13;CL:0002031,4.83e-10,25;CL:0000050,2.31e-08,9;CL:0000763,2.32e-08,16;CL:0000988,2.04e-07,32;CL:0002032,2.04e-07,32;CL:0000037,2.04e-07,32;CL:0000837,2.04e-07,32;CL:0000049,7.15e-07,19;CL:0002476,9.88e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.79e-10!48;UBERON:0002405!5.66e-10!70;UBERON:0002390!3.78e-08!45;UBERON:0003061!3.78e-08!45;UBERON:0003081!4.53e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.57e-11,22;UBERON:0004765,2.57e-11,22;UBERON:0001434,2.57e-11,22;UBERON:0002193,1.04e-10,48;UBERON:0002405,1.04e-10,48;UBERON:0002465,1.37e-09,3;UBERON:0002371,2.32e-08,16;UBERON:0002106,3.72e-08,6;UBERON:0004457,3.72e-08,6;UBERON:0000042,3.72e-08,6;UBERON:0004854,3.72e-08,6;UBERON:0009034,3.72e-08,6;UBERON:0002095,3.72e-08,6;UBERON:0004782,3.72e-08,6;UBERON:0003281,3.72e-08,6;UBERON:0009664,3.72e-08,6;UBERON:0002296,3.72e-08,6;UBERON:0005602,3.72e-08,6;UBERON:0001179,3.72e-08,6;UBERON:0006293,3.72e-08,6;UBERON:0002204,3.52e-07,32;UBERON:0002390,4.62e-07,45;UBERON:0003061,4.62e-07,45;UBERON:0003887,4.94e-07,10;UBERON:0001962,8.14e-07,2;UBERON:0001961,8.14e-07,2;UBERON:0001744,8.14e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,4.99664642723494,7.08663435864391,0,35.6472246854809,32.7703496317716,41.1657962244089,0.255129870453209,2.08510997521859,1.82839852397255,6.55968933452967,5.73523202667925,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,0,20.1339127269284,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,11.3932668804756,0.148442139064825,0,0,0,0,0.117588707135705,0,0,1.15679485535929,1.76922110389975,0.323533699894818,1.10420759230197,1.93950101254089,0,0,0,0.766371165625774,0.359445373517761,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,1.49288364732112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.292399974850665,1.3173006917463,0,0,0,0.991256348951394,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0.823684239564244,1.43768206527355,0,0.312037673114561,0.505157755894224,0.179397413521912,0.482443521363367,1.10851914099963,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,1.63863314715738,2.07221978239075,0.723245292907558,6.03165135757089,4.35124547054968,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,2.65490276679926,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.874442509889552,0,8.54354403989263,0,0.370389054739423,3.20226376907975,9.70529016819279,7.77845788902177,1.01987057996313,0.279902904647316,1.52019971184866,0,0,0,0.108005340821801,0,0,0,0,0,0,1.86401793926078,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0.810900861160657,0.513554785824136,1.55904987573354,0.179026695667481,0.993406773906324,0.120195449519969,0.738447635872886,0.201932899896295,0.228620419965,0.302478555410522,0,0.192423683280659,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p10@Syk | |||
}} |
Latest revision as of 17:39, 1 October 2015
Short description: | p10@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000055087_5end |
EntrezGene: | Syk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.47e-13 | 6 |
megakaryocyte | 9.47e-13 | 6 |
myeloid lineage restricted progenitor cell | 1.53e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 4.83e-10 | 25 |
megakaryocyte-erythroid progenitor cell | 2.31e-08 | 9 |
myeloid cell | 2.32e-08 | 16 |
hematopoietic cell | 2.04e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.04e-07 | 32 |
hematopoietic stem cell | 2.04e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.04e-07 | 32 |
common myeloid progenitor | 7.15e-07 | 19 |
bone marrow macrophage | 9.88e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.57e-11 | 22 |
skeletal element | 2.57e-11 | 22 |
skeletal system | 2.57e-11 | 22 |
hemolymphoid system | 1.04e-10 | 48 |
immune system | 1.04e-10 | 48 |
lymphoid system | 1.37e-09 | 3 |
bone marrow | 2.32e-08 | 16 |
spleen | 3.72e-08 | 6 |
cavity lining | 3.72e-08 | 6 |
serous membrane | 3.72e-08 | 6 |
gastrointestinal system mesentery | 3.72e-08 | 6 |
stomach region | 3.72e-08 | 6 |
mesentery | 3.72e-08 | 6 |
gastrointestinal system serosa | 3.72e-08 | 6 |
mesentery of stomach | 3.72e-08 | 6 |
gut mesentery | 3.72e-08 | 6 |
dorsal mesentery | 3.72e-08 | 6 |
dorsal mesogastrium | 3.72e-08 | 6 |
peritoneal cavity | 3.72e-08 | 6 |
spleen primordium | 3.72e-08 | 6 |
musculoskeletal system | 3.52e-07 | 32 |
hematopoietic system | 4.62e-07 | 45 |
blood island | 4.62e-07 | 45 |
intraembryonic coelom | 4.94e-07 | 10 |
gut-associated lymphoid tissue | 8.14e-07 | 2 |
mucosa-associated lymphoid tissue | 8.14e-07 | 2 |
lymphoid tissue | 8.14e-07 | 2 |