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FFCP PHASE1:Mm9::chr1:88567140..88567154,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18159
|EntrezGene=18159
|HGNC=
|HGNC=
|MCL_coexpression_id=310
|TSSclassifier=NA
|UniProt=Q61839,Q544K5
|UniProt=Q61839,Q544K5
|association_with_transcript=0bp_to_ENSMUST00000027449,NM_010933,uc007bvt.1_5end
|association_with_transcript=0bp_to_ENSMUST00000027449,NM_010933,uc007bvt.1_5end
|cluster_id=chr1:88567140..88567154,-
|description=CAGE_peak_1_at_Nppc_5end
|description=CAGE_peak_1_at_Nppc_5end
|id=chr1:88567140..88567154,-
|id=chr1:88567140..88567154,-
|ontology_enrichment_celltype=CL:0000221!2.22e-08!44;CL:0000133!2.22e-08!44;CL:0002319!3.65e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000221,7.72e-08,44;CL:0000133,7.72e-08,44;CL:0002319,1.34e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.76e-22!75;UBERON:0001016!2.76e-22!75;UBERON:0001017!4.02e-22!73;UBERON:0005743!4.02e-22!73;UBERON:0004121!1.82e-20!102;UBERON:0000924!1.82e-20!102;UBERON:0006601!1.82e-20!102;UBERON:0001049!2.86e-18!52;UBERON:0005068!2.86e-18!52;UBERON:0006241!2.86e-18!52;UBERON:0007135!2.86e-18!52;UBERON:0000955!4.15e-16!50;UBERON:0006238!4.15e-16!50;UBERON:0000033!6.53e-16!63;UBERON:0002616!7.86e-16!49;UBERON:0002346!6.27e-15!71;UBERON:0003075!6.27e-15!71;UBERON:0007284!6.27e-15!71;UBERON:0003080!6.96e-12!40;UBERON:0002780!1.91e-11!39;UBERON:0001890!1.91e-11!39;UBERON:0006240!1.91e-11!39;UBERON:0003056!3.08e-11!49;UBERON:0002020!2.69e-10!34;UBERON:0000153!8.11e-08!94;UBERON:0002791!8.79e-08!29;UBERON:0003528!8.79e-08!29;UBERON:0001893!8.79e-08!29;UBERON:0002619!1.35e-07!17;UBERON:0003076!1.47e-07!12;UBERON:0003057!1.47e-07!12;UBERON:0007811!3.09e-07!86;UBERON:0000956!5.87e-07!21;UBERON:0001869!5.87e-07!21;UBERON:0000203!5.87e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.98e-23,75;UBERON:0001017,9.65e-23,73;UBERON:0004121,4.70e-22,95;UBERON:0000924,4.70e-22,95;UBERON:0006601,4.70e-22,95;UBERON:0000073,4.51e-19,54;UBERON:0001049,1.48e-18,52;UBERON:0005068,1.48e-18,52;UBERON:0006241,1.48e-18,52;UBERON:0007135,1.48e-18,52;UBERON:0010371,2.71e-17,73;UBERON:0002346,3.46e-16,64;UBERON:0003075,3.46e-16,64;UBERON:0007284,3.46e-16,64;UBERON:0000955,5.87e-15,47;UBERON:0006238,5.87e-15,47;UBERON:0002616,1.21e-14,46;UBERON:0003080,2.05e-11,40;UBERON:0002780,6.31e-11,39;UBERON:0001890,6.31e-11,39;UBERON:0006240,6.31e-11,39;UBERON:0002020,5.75e-10,34;UBERON:0003056,8.28e-10,49;UBERON:0003076,1.41e-08,12;UBERON:0003057,1.41e-08,12;UBERON:0010314,3.04e-08,92;UBERON:0002619,1.84e-07,17;UBERON:0002021,2.10e-07,10;UBERON:0000411,2.10e-07,10;UBERON:0001950,2.10e-07,10;UBERON:0003528,3.29e-07,29;UBERON:0002791,3.29e-07,29;UBERON:0001893,3.29e-07,29
|phase1_expression=5.12476310735341,0,0,0,0,0,0.467225281191051,0,0.422366166455,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,5.10259740906419,0.0992909512008853,0,0,0,0,0,0.646413698057667,0.190023419456374,0,0,2.54012269383853,1.23012957516914,0,0.577703239502549,0.166234645358492,2.24586291888606,0,0,0,0,0,0,1.88845226963366,2.33166941804883,1.83546752161682,2.34717403304412,57.7766664408183,59.7546417037763,66.8838852815535,7.55926676776958,175.378128525265,0,0,0,0,0,0.515672092277442,2.42779753031517,3.1739458756322,5.07065122804943,7.79342423759004,12.450127145556,0,0,0,17.0772062995491,53.7905627450176,0.414758449233911,1.08004750665353,0.630974884054146,16.8534080798244,16.3442720304194,1.46988959057945,0.958454710182364,0.919218786610021,4.40463523997555,4.85211884723713,5.83704826373725,2.50583946687368,1.55528994124096,0.52091337055676,9.21303896704557,1.68828783009504,6.87592114995646,19.1508580557884,14.0947963991112,10.4383689662168,1.66597625333005,2.34271836331035,0.869593466105033,0,2.03991400112325,0,0,0,1.40444420131752,0,0,0,3.23939865486365,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0,0,0,1.21439728736295,0.913396434936424,0,0.301445281105245,1.76383060703557,0.376999773989026,2.71914464507811,0,0,7.27950824763341,1.98757366614354,1.93950101254089,0,9.66176630138106,6.91174132484402,0,0.11981512450592,0.599902730993408,0.127070227073065,8.98743836428936,6.40500843946077,1.7591609295801,9.03886464999838,11.2514801225345,7.89594569326328,7.46309810111685,4.17541391786297,0.746441823660558,0,0.631325567659422,0.260240885925407,2.5289231487682,2.70093194708024,2.56198190320716,0.816437989815934,1.92170580427275,0.749613796477831,1.55222022443409,0.646703978798527,1.13463648100692,1.40760899331159,2.84954452155847,4.44875598760957,6.96504333044333,6.99659263787008,10.1507476077432,0,0,0,0.828503090142008,0.469052119962192,1.2604344302271,0.946978942340841,0,0.925602677324269,0.232533944750408,0.804820204198858,0.817357396570186,0.658239399653922,1.14917224855367,0.405344047729279,0.292399974850665,0.658650345873152,0.805238512562231,5.04695876553905,3.91037527041281,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,2.27601481143698,1.48523066392647,2.25415471346161,1.4255592949172,0.581857461502877,1.1221731182451,0.0632365371242573,0,0,0.246794327843601,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0,0,0,0.947457058852424,0.162964976442026,0.339490171550376,0.704070744865506,1.50755631697634,8.80761471278251,1.95133647857799,0.630540576424764,0.8858587585951,0.159454768657487,0,0,0,0,0,0,0,34.5183768473753,32.5848488726325,0,0.504941854408746,0.631016438832513,1.95219372148319,3.01592756825919,2.38968797952552,1.55959071857676,1.98153571552183,0,0.584511715822624,1.18586333383957,3.53453448063988,17.7425106510336,0.712262414669021,0.81443479676788,0.989820737835213,0,0.485561272309963,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,2.7235168460303,0.720244376125241,8.14959707831353,14.3605813471167,22.699549906211,23.0095774706671,21.72047071948,6.69822888052118,32.384695712792,45.7557273065852,0.661585194164886,4.9465875882444,0.968786560175433,5.48847616846218,14.9215430003921,22.3231623653283,0,23.1781627513137,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0.559805809294632,0.276399947608848,0,0.158167996790568,1.62655573701479,1.29606408986162,1.46361807210128,1.52853794622324,0.944050424693745,1.40510874733071,1.04702376793612,0,0.621339313086926,0,29.9033092087958,32.4298641295911,18.2784117043405,20.4072521094815,9.2925869019928,2.93393096614385,1.3020438484395,1.8874681996628,0,0.576060012515731,0,0.810900861160657,0.821687657318618,0.25984164595559,0.895133478337407,0.79472541912506,0.120195449519969,0,0.302899349844443,0.457240839929999,0,0.0974578807397524,0.288635524920988,0.233753804363138,2.94749498699775,0.665957860122194,0.986852422704233,1.34307693091263,0,2.62755465631655,28.9379566342279,11.7902608493486,0.501572104035363,15.2482997506608,14.7304075682297,22.3429250241365,15.1230800462445,10.2762377965596,10.5755145634558,10.8003600037089,10.3573876741571,12.2348450425735,9.31968561153276,1.55681021376265,2.39414924040619,3.07320490357441,4.86213434136588,1.88651846365184,1.83843508450014,1.55572709461131,3.5025959730612,3.53011130550997,3.28506375292937,4.56262739802432,3.58390048633545,2.34103768674706,4.1616349063165,3.56099907524802,4.28664322154766,3.24476112645595,3.27945674788299,2.06042950401653,3.53277408322554,4.4573002810104,3.01708870470874,2.86123427936785,2.32554266611726,3.57615645578256,3.46919892355874,2.56099162021882,3.15683653725411,2.8518863907631,3.92799590160417,4.86403574309114,2.9551344712669,2.45538625901814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|phase1_expression=5.12476310735341,0,0,0,0,0,0.467225281191051,0,0.422366166455,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,5.10259740906419,0.0992909512008853,0,0,0,0,0,0.646413698057667,0.190023419456374,0,0,2.54012269383853,1.23012957516914,0,0.577703239502549,0.166234645358492,2.24586291888606,0,0,0,0,0,0,1.88845226963366,2.33166941804883,1.83546752161682,2.34717403304412,57.7766664408183,59.7546417037763,66.8838852815535,7.55926676776958,175.378128525265,0,0,0,0,0,0.515672092277442,2.42779753031517,3.1739458756322,5.07065122804943,7.79342423759004,12.450127145556,0,0,0,17.0772062995491,53.7905627450176,0.414758449233911,1.08004750665353,0.630974884054146,16.8534080798244,16.3442720304194,1.46988959057945,0.958454710182364,0.919218786610021,4.40463523997555,4.85211884723713,5.83704826373725,2.50583946687368,1.55528994124096,0.52091337055676,9.21303896704557,1.68828783009504,6.87592114995646,19.1508580557884,14.0947963991112,10.4383689662168,1.66597625333005,2.34271836331035,0.869593466105033,0,2.03991400112325,0,0,0,1.40444420131752,0,0,0,3.23939865486365,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0,0,0,1.21439728736295,0.913396434936424,0,0.301445281105245,1.76383060703557,0.376999773989026,2.71914464507811,0,0,7.27950824763341,1.98757366614354,1.93950101254089,0,9.66176630138106,6.91174132484402,0,0.11981512450592,0.599902730993408,0.127070227073065,8.98743836428936,6.40500843946077,1.7591609295801,9.03886464999838,11.2514801225345,7.89594569326328,7.46309810111685,4.17541391786297,0.746441823660558,0,0.631325567659422,0.260240885925407,2.5289231487682,2.70093194708024,2.56198190320716,0.816437989815934,1.92170580427275,0.749613796477831,1.55222022443409,0.646703978798527,1.13463648100692,1.40760899331159,2.84954452155847,4.44875598760957,6.96504333044333,6.99659263787008,10.1507476077432,0,0,0,0.828503090142008,0.469052119962192,1.2604344302271,0.946978942340841,0,0.925602677324269,0.232533944750408,0.804820204198858,0.817357396570186,0.658239399653922,1.14917224855367,0.405344047729279,0.292399974850665,0.658650345873152,0.805238512562231,5.04695876553905,3.91037527041281,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0,0.823494773620054,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,2.27601481143698,1.48523066392647,2.25415471346161,1.4255592949172,0.581857461502877,1.1221731182451,0.0632365371242573,0,0,0.246794327843601,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0,0,0,0.947457058852424,0.162964976442026,0.339490171550376,0.704070744865506,1.50755631697634,8.80761471278251,1.95133647857799,0.630540576424764,0.8858587585951,0.159454768657487,0,0,0,0,0,0,0,34.5183768473753,32.5848488726325,0,0.504941854408746,0.631016438832513,1.95219372148319,3.01592756825919,2.38968797952552,1.55959071857676,1.98153571552183,0,0.584511715822624,1.18586333383957,3.53453448063988,17.7425106510336,0.712262414669021,0.81443479676788,0.989820737835213,0,0.485561272309963,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,0.727067458955011,0.712994756769443,0,0,0,2.7235168460303,0.720244376125241,8.14959707831353,14.3605813471167,22.699549906211,23.0095774706671,21.72047071948,6.69822888052118,32.384695712792,45.7557273065852,0.661585194164886,4.9465875882444,0.968786560175433,5.48847616846218,14.9215430003921,22.3231623653283,0,23.1781627513137,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0.559805809294632,0.276399947608848,0,0.158167996790568,1.62655573701479,1.29606408986162,1.46361807210128,1.52853794622324,0.944050424693745,1.40510874733071,1.04702376793612,0,0.621339313086926,0,29.9033092087958,32.4298641295911,18.2784117043405,20.4072521094815,9.2925869019928,2.93393096614385,1.3020438484395,1.8874681996628,0,0.576060012515731,0,0.810900861160657,0.821687657318618,0.25984164595559,0.895133478337407,0.79472541912506,0.120195449519969,0,0.302899349844443,0.457240839929999,0,0.0974578807397524,0.288635524920988,0.233753804363138,2.94749498699775,0.665957860122194,0.986852422704233,1.34307693091263,0,2.62755465631655,28.9379566342279,11.7902608493486,0.501572104035363,15.2482997506608,14.7304075682297,22.3429250241365,15.1230800462445,10.2762377965596,10.5755145634558,10.8003600037089,10.3573876741571,12.2348450425735,9.31968561153276,1.55681021376265,2.39414924040619,3.07320490357441,4.86213434136588,1.88651846365184,1.83843508450014,1.55572709461131,3.5025959730612,3.53011130550997,3.28506375292937,4.56262739802432,3.58390048633545,2.34103768674706,4.1616349063165,3.56099907524802,4.28664322154766,3.24476112645595,3.27945674788299,2.06042950401653,3.53277408322554,4.4573002810104,3.01708870470874,2.86123427936785,2.32554266611726,3.57615645578256,3.46919892355874,2.56099162021882,3.15683653725411,2.8518863907631,3.92799590160417,4.86403574309114,2.9551344712669,2.45538625901814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|short_description=p1@Nppc
|short_description=p1@Nppc
}}
}}

Latest revision as of 17:50, 1 October 2015

Short description:p1@Nppc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nppc_5end
Coexpression cluster:MCL_coexpression_mm9:310
Association with transcript: 0bp_to_ENSMUST00000027449, NM_010933, uc007bvt.1_5end
EntrezGene:Nppc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nppc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C257.78
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B859.75
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C366.88
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C4175.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E853.79
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C234.52
medulla oblongata, neonate N30.CNhs11200.1396-42A332.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I717.74
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F623.01
pituitary gland, embryo E17.CNhs11039.1265-44F521.72
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I732.38
placenta, adult pregnant day17.CNhs10464.577-18G345.76
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I514.92
skin, neonate N10.CNhs11108.762-6C422.32
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C923.18
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F529.90
testis, embryo E15.CNhs11034.443-27C532.43
testis, embryo E16.CNhs11033.470-26G518.28
testis, embryo E17.CNhs11029.486-18I520.41
testis, embryo E18.CNhs11027.503-18G59.29
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E528.94
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell7.72e-0844
neurectodermal cell7.72e-0844
neural cell1.34e-0743

Uber anatomy
Ontology termp-valuen
nervous system5.98e-2375
central nervous system9.65e-2373
ectoderm-derived structure4.70e-2295
ectoderm4.70e-2295
presumptive ectoderm4.70e-2295
regional part of nervous system4.51e-1954
neural tube1.48e-1852
neural rod1.48e-1852
future spinal cord1.48e-1852
neural keel1.48e-1852
ecto-epithelium2.71e-1773
neurectoderm3.46e-1664
neural plate3.46e-1664
presumptive neural plate3.46e-1664
brain5.87e-1547
future brain5.87e-1547
regional part of brain1.21e-1446
anterior neural tube2.05e-1140
regional part of forebrain6.31e-1139
forebrain6.31e-1139
future forebrain6.31e-1139
gray matter5.75e-1034
pre-chordal neural plate8.28e-1049
posterior neural tube1.41e-0812
chordal neural plate1.41e-0812
structure with developmental contribution from neural crest3.04e-0892
regional part of cerebral cortex1.84e-0717
occipital lobe2.10e-0710
visual cortex2.10e-0710
neocortex2.10e-0710
brain grey matter3.29e-0729
regional part of telencephalon3.29e-0729
telencephalon3.29e-0729
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