FFCP PHASE1:Mm9::chr5:117863775..117863794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=333050 | |EntrezGene=333050 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=248 | |||
|TSSclassifier=NA | |||
|UniProt=C4IXV3,Q3UVC0 | |UniProt=C4IXV3,Q3UVC0 | ||
|association_with_transcript=-214bp_to_ENSMUST00000073347,uc008zfu.1,uc008zfv.2_5end | |association_with_transcript=-214bp_to_ENSMUST00000073347,uc008zfu.1,uc008zfv.2_5end | ||
|cluster_id=chr5:117863775..117863794,+ | |||
|description=CAGE_peak_4_at_Ksr2_5end | |description=CAGE_peak_4_at_Ksr2_5end | ||
|id=chr5:117863775..117863794,+ | |id=chr5:117863775..117863794,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.66e-10!33;CL:0000047!2.66e-10!33;CL:0000031!2.66e-10!33;CL:0000404!2.66e-10!33;CL:0000117!2.88e-09!23;CL:0000337!2.88e-09!23;CL:0000393!5.14e-07!39;CL:0000211!5.14e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,5.52e-08,3;CL:0000117,1.97e-07,23;CL:0000337,1.97e-07,23;CL:0000540,3.07e-07,33;CL:0000047,3.07e-07,33;CL:0000031,3.07e-07,33;CL:0000404,3.07e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.38e-19!71;UBERON:0003075!1.38e-19!71;UBERON:0007284!1.38e-19!71;UBERON:0004121!1.79e-18!102;UBERON:0000924!1.79e-18!102;UBERON:0006601!1.79e-18!102;UBERON:0001017!4.39e-18!73;UBERON:0005743!4.39e-18!73;UBERON:0000073!6.24e-17!75;UBERON:0001016!6.24e-17!75;UBERON:0000033!1.23e-14!63;UBERON:0001049!2.32e-14!52;UBERON:0005068!2.32e-14!52;UBERON:0006241!2.32e-14!52;UBERON:0007135!2.32e-14!52;UBERON:0000955!2.81e-13!50;UBERON:0006238!2.81e-13!50;UBERON:0002616!9.66e-13!49;UBERON:0003056!5.95e-12!49;UBERON:0003080!1.77e-10!40;UBERON:0002780!7.14e-10!39;UBERON:0001890!7.14e-10!39;UBERON:0006240!7.14e-10!39;UBERON:0007811!4.20e-09!86;UBERON:0001894!4.02e-08!10;UBERON:0006222!4.02e-08!10;UBERON:0000007!8.40e-08!8;UBERON:0003296!8.40e-08!8;UBERON:0010133!8.40e-08!8;UBERON:0000153!3.15e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.17e-23,8;UBERON:0003296,6.17e-23,8;UBERON:0010133,6.17e-23,8;UBERON:0001017,3.76e-18,73;UBERON:0001894,4.65e-18,10;UBERON:0006222,4.65e-18,10;UBERON:0001016,1.60e-17,75;UBERON:0001049,4.36e-15,52;UBERON:0005068,4.36e-15,52;UBERON:0006241,4.36e-15,52;UBERON:0007135,4.36e-15,52;UBERON:0000073,1.39e-14,54;UBERON:0002346,1.84e-14,64;UBERON:0003075,1.84e-14,64;UBERON:0007284,1.84e-14,64;UBERON:0004121,4.86e-14,95;UBERON:0000924,4.86e-14,95;UBERON:0006601,4.86e-14,95;UBERON:0002616,2.44e-12,46;UBERON:0010371,4.28e-12,73;UBERON:0000955,5.34e-12,47;UBERON:0006238,5.34e-12,47;UBERON:0003080,7.06e-11,40;UBERON:0003056,1.01e-09,49;UBERON:0010314,1.15e-09,92;UBERON:0002780,1.41e-09,39;UBERON:0001890,1.41e-09,39;UBERON:0006240,1.41e-09,39 | |||
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|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0,0,0,0.274228867211478,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.405017814995072,0,1.14260393761521,0.220868540951614,0.367472397644862,0.575072826109418,0,3.30347642998166,0.383062014255563,0.307213066512487,1.58263545276233,1.55528994124096,0.52091337055676,1.11673199600552,0.56276261003168,0.763991238884051,0.883885756421003,0.854230084794618,1.1183966749518,0,0,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.742210695324124,1.21439728736295,0.608930956624282,0.922461989024234,0.452167921657868,0.940709657085638,0.125666591329675,0,0,0,0,0,0,0,3.80615036115011,2.30391377494801,0,0,0,0,1.64769703345305,0.457500602818626,0.753926112677186,0.521472960576829,0.767146371990992,0.20778804455956,0.973447578406546,0,0.124406970610093,2.0217820674694,0.841767423545896,0.390361328888111,0,0.180062129805349,0.150704817835715,0.748401490664606,0.2562274405697,0.187403449119458,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,1.64647379806855,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.456994050438915,1.1270773567308,1.01825663922657,0.969762435838129,0.280543279561274,0.379419222745544,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.670025029767263,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.642202359951168,0.937693492737625,0,0,0.94652465824877,0,1.29254038639679,0,0.445597348164788,0.849229592366497,0,0.292255857911312,1.58115111178609,0.963963949265421,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,2.65490276679926,0.971122544619926,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0,0,2.06271086496374,9.53230896110606,1.8006109403131,2.06973894052407,3.42939256050548,5.67488747655275,5.70780216326626,4.44282355625727,3.34911444026059,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0.170870880797853,0,0.370389054739423,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.234714477291508,0,0,0,0.288030006257865,0.316011120628178,0,0.616265742988964,0,0.716106782669926,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0,0,1.35232715822533,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0,0,0,0,1.80128481289688,0,0.51776031175182,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,1.24905288968973,0,0,0,0,0 | ||
|short_description=p4@Ksr2 | |short_description=p4@Ksr2 | ||
}} | }} |
Latest revision as of 18:16, 1 October 2015
Short description: | p4@Ksr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ksr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | -214bp_to_ENSMUST00000073347, uc008zfu.1, uc008zfv.2_5end |
EntrezGene: | Ksr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 5.52e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.97e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-07 | 23 |
neuron | 3.07e-07 | 33 |
neuronal stem cell | 3.07e-07 | 33 |
neuroblast | 3.07e-07 | 33 |
electrically signaling cell | 3.07e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.17e-23 | 8 |
gland of diencephalon | 6.17e-23 | 8 |
neuroendocrine gland | 6.17e-23 | 8 |
central nervous system | 3.76e-18 | 73 |
diencephalon | 4.65e-18 | 10 |
future diencephalon | 4.65e-18 | 10 |
nervous system | 1.60e-17 | 75 |
neural tube | 4.36e-15 | 52 |
neural rod | 4.36e-15 | 52 |
future spinal cord | 4.36e-15 | 52 |
neural keel | 4.36e-15 | 52 |
regional part of nervous system | 1.39e-14 | 54 |
neurectoderm | 1.84e-14 | 64 |
neural plate | 1.84e-14 | 64 |
presumptive neural plate | 1.84e-14 | 64 |
ectoderm-derived structure | 4.86e-14 | 95 |
ectoderm | 4.86e-14 | 95 |
presumptive ectoderm | 4.86e-14 | 95 |
regional part of brain | 2.44e-12 | 46 |
ecto-epithelium | 4.28e-12 | 73 |
brain | 5.34e-12 | 47 |
future brain | 5.34e-12 | 47 |
anterior neural tube | 7.06e-11 | 40 |
pre-chordal neural plate | 1.01e-09 | 49 |
structure with developmental contribution from neural crest | 1.15e-09 | 92 |
regional part of forebrain | 1.41e-09 | 39 |
forebrain | 1.41e-09 | 39 |
future forebrain | 1.41e-09 | 39 |