FFCP PHASE1:Mm9::chr13:55736363..55736397,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:55736363..55736397,+ to FFCP PHASE1:Mm9::chr13:55736363..55736397,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=212880 | |EntrezGene=212880 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=466 | |||
|TSSclassifier=NA | |||
|UniProt=F8WHR6,Q569Z5 | |UniProt=F8WHR6,Q569Z5 | ||
|association_with_transcript=0bp_to_ENSMUST00000099479,ENSMUST00000172272,NM_145975,uc011yzx.1_5end | |||
|cluster_id=chr13:55736363..55736397,+ | |||
|description=CAGE_peak_1_at_Ddx46_5end | |||
|id=chr13:55736363..55736397,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.34e-07!13;CL:0000051!2.34e-07!13;CL:0000838!4.63e-07!12;CL:0000791!5.85e-07!9;CL:0000789!5.85e-07!9;CL:0002420!5.85e-07!9;CL:0002419!5.85e-07!9;CL:0000790!5.85e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.34e-07,13;CL:0000051,2.34e-07,13;CL:0000838,4.63e-07,12;CL:0000791,5.85e-07,9;CL:0000789,5.85e-07,9;CL:0002420,5.85e-07,9;CL:0002419,5.85e-07,9;CL:0000790,5.85e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.03e-10!29;UBERON:0002370!6.26e-09!23;UBERON:0000974!6.26e-09!23;UBERON:0004807!6.26e-09!23;UBERON:0005058!6.26e-09!23;UBERON:0003351!6.26e-09!23;UBERON:0009113!6.26e-09!23;UBERON:0003295!6.26e-09!23;UBERON:0009722!6.26e-09!23;UBERON:0005562!6.26e-09!23;UBERON:0007690!6.26e-09!23;UBERON:0003408!1.20e-08!24;UBERON:0006562!1.52e-08!24;UBERON:0001557!1.52e-08!24;UBERON:0001042!1.52e-08!24;UBERON:0008814!1.52e-08!24;UBERON:0009145!1.52e-08!24;UBERON:0000065!9.54e-08!41;UBERON:0002390!1.16e-07!45;UBERON:0003061!1.16e-07!45;UBERON:0001004!1.28e-07!42;UBERON:0002193!2.42e-07!48;UBERON:0001048!2.70e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.03e-10,29;UBERON:0005057,1.03e-10,29;UBERON:0000077,1.57e-09,35;UBERON:0002370,6.26e-09,23;UBERON:0000974,6.26e-09,23;UBERON:0004807,6.26e-09,23;UBERON:0005058,6.26e-09,23;UBERON:0003351,6.26e-09,23;UBERON:0009113,6.26e-09,23;UBERON:0003295,6.26e-09,23;UBERON:0009722,6.26e-09,23;UBERON:0005562,6.26e-09,23;UBERON:0007690,6.26e-09,23;UBERON:0000153,8.25e-09,43;UBERON:0003408,1.20e-08,24;UBERON:0006562,1.52e-08,24;UBERON:0001557,1.52e-08,24;UBERON:0001042,1.52e-08,24;UBERON:0008814,1.52e-08,24;UBERON:0009145,1.52e-08,24;UBERON:0000065,9.54e-08,41;UBERON:0002390,1.16e-07,45;UBERON:0003061,1.16e-07,45;UBERON:0001004,1.28e-07,42;UBERON:0007811,2.07e-07,36;UBERON:0002193,2.42e-07,48;UBERON:0002405,2.42e-07,48;UBERON:0001048,5.62e-07,134 | |||
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|phase1_expression=52.5288218503724,35.9444669868542,26.3899558845931,40.8326685264221,35.0627010962443,43.4807314251795,57.9359348676904,115.952744450535,141.91503192888,154.248522846194,142.45334956362,143.35056971462,132.680565696684,144.068823186508,94.2700625938325,113.183674470913,100.037348572325,111.200413288779,116.273039697666,70.448682198473,90.7411905911915,76.4540324246817,79.4047358982364,62.8770221578088,49.3229954294416,18.3754228516806,27.9995297503399,36.1991670912294,45.9856675084425,55.1945984174248,38.8028393646783,24.131165591466,19.6820732027062,15.8481681015439,50.8378850762243,45.0495888921514,52.6756939156912,74.4986302711696,61.7254922173802,68.5816104605676,72.3524730278148,67.6215030108861,69.427980483455,65.3404485293246,57.4807200014648,56.1653061614746,6.25913075478431,6.75877984779384,2.41654801007919,9.13820525649132,8.39918529752175,2.87505128729943,111.91099824051,134.91735841411,151.914397212394,53.7672221315129,41.260815351181,33.0030139057563,29.1335703637821,25.9205579843296,21.5502677192101,5.42151251310611,4.4464739805557,3.5995988691256,6.92206453796882,9.2362414942993,6.2916023208865,7.30014780110954,40.3352591879978,34.4265142745811,34.4932936616267,12.5686433137674,13.4729809980484,44.0966877173835,35.4628242767475,32.1726575313507,47.3498288297371,49.4149998389676,54.8375323724789,28.2236655742615,34.7653045689157,34.9011958273029,22.3346399201105,45.0210088025344,41.2555268997387,47.1405736757868,47.1250263445031,37.6526880567107,72.5456932131903,66.7296875742916,75.9444960398396,30.1148356943485,24.478968013479,43.7159585226632,57.1803247353949,66.3079792904057,66.8515439827139,65.1043832248181,49.8789128837508,46.2874842608546,43.661460130771,43.6310023208681,117.210410265057,49.7746692207332,50.6589035966241,59.5395683866482,55.1021645066114,65.8840985978976,238.481790839045,58.0408763743465,50.6577154157117,51.4546658347519,50.0435629045647,48.2312449768392,88.6618851803214,43.1036408260787,68.9673959978903,86.6150147950271,77.8457285715889,69.0744449275437,80.3863127195832,89.7019218300161,96.9237158334235,107.743333300249,84.8259162594493,64.1197208573564,106.036385187739,56.9907594443737,90.346931448949,69.2032754050281,66.3375874087008,63.3297934648837,71.6156199192179,75.1803444551172,54.6482557191643,74.4687397481008,85.8505837258166,88.7021700449963,45.4900965180614,75.5486262632442,104.226474813126,49.1990503487632,76.3463430374681,77.1608667318861,102.122785226143,107.999866200128,70.838503767155,99.083390993043,79.7601573851516,102.30638937079,90.4388778202697,77.3760935469339,96.4823954812825,78.3567374674875,92.1903971107587,75.8320556578459,94.0965670999735,102.167119124542,84.9648863192822,71.6655172972837,80.2079125135349,70.0441419083348,65.8150364926884,70.8351234290654,72.197008831293,66.0396403091158,59.2884217093158,70.5262667897704,56.9377080700642,72.397851658881,69.9623826380735,60.3805948066622,64.5477338955689,62.1375718860521,74.0220618945728,85.7195421119439,45.5977920517641,66.1126416658861,94.4866949871086,94.9847987909194,96.5217285302479,81.4801439478304,74.7190227318764,53.8338521898542,60.265190816153,65.5501839801563,61.3257909472658,68.8389393262382,61.608651529642,84.4890244134968,62.2477583639119,65.9157614471955,26.9328419353376,89.6850823986371,100.309884749042,85.9408603507226,76.9991374055474,93.2105046342334,75.7573714748602,87.2375974559449,69.7074351615704,81.3187310244665,51.8792097402511,108.616163821177,101.2278824833,105.910054933266,103.864382150913,81.7590571560693,59.3278234650708,68.4716807132929,81.8782895213929,57.9324581826852,153.831980984269,72.1953438476897,52.1102914101316,60.8715095852539,61.1745180109721,63.6825448199645,74.4555356371417,55.520983648752,89.1418421137882,83.3448371156174,94.5801700602664,80.2354973146297,85.6957107189649,78.8339937345507,95.0539918960332,84.1565820665345,81.3219320153184,78.81825437827,72.5276923836761,83.8964539772767,57.3006878969235,52.7588513304148,68.355233949646,72.2954275318399,51.5367393860812,70.5614353285063,61.1477346254999,67.9146794179763,54.8984301784287,44.5100168498168,71.3051446495564,72.1685769816707,73.5235624471901,77.2798929053512,62.3408480579337,59.035683298085,66.408346695016,79.6876864726081,66.7118400478863,50.3925658378332,76.3939839368272,70.6072126322452,100.886305138372,70.8919457572546,57.1391522663379,90.9076484423429,54.630850182943,64.8688162161687,83.9891952796719,67.9808074122935,64.1695281092498,87.542181948221,70.6304677452492,70.1321694087671,61.6195686414356,79.0468202797452,36.9965835618678,49.7261921273294,87.4287351856409,69.9205765000117,58.7440003549572,37.1447237919811,77.6763353690881,53.5935139285465,88.6524160180947,225.729280276886,123.197357568976,109.106081195034,87.0224387782865,113.093079924347,71.4128049743134,64.5280050996574,85.6063112797242,71.409856315275,107.783214929172,116.788443342908,150.910427404012,93.7990510146743,103.006928576276,89.8488323917884,97.9837814273365,68.7362844970882,92.6864461192727,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| ||
|short_description=p1@Ddx46 | |||
}} | }} |
Latest revision as of 18:54, 1 October 2015
Short description: | p1@Ddx46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ddx46_5end |
Coexpression cluster: | MCL_coexpression_mm9:466 |
Association with transcript: | 0bp_to_ENSMUST00000099479, ENSMUST00000172272, NM_145975, uc011yzx.1_5end |
EntrezGene: | Ddx46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.34e-07 | 13 |
common lymphoid progenitor | 2.34e-07 | 13 |
lymphoid lineage restricted progenitor cell | 4.63e-07 | 12 |
mature alpha-beta T cell | 5.85e-07 | 9 |
alpha-beta T cell | 5.85e-07 | 9 |
immature T cell | 5.85e-07 | 9 |
mature T cell | 5.85e-07 | 9 |
immature alpha-beta T cell | 5.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.03e-10 | 29 |
immune organ | 1.03e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.57e-09 | 35 |
thymus | 6.26e-09 | 23 |
neck | 6.26e-09 | 23 |
respiratory system epithelium | 6.26e-09 | 23 |
hemolymphoid system gland | 6.26e-09 | 23 |
pharyngeal epithelium | 6.26e-09 | 23 |
thymic region | 6.26e-09 | 23 |
pharyngeal gland | 6.26e-09 | 23 |
entire pharyngeal arch endoderm | 6.26e-09 | 23 |
thymus primordium | 6.26e-09 | 23 |
early pharyngeal endoderm | 6.26e-09 | 23 |
anterior region of body | 8.25e-09 | 43 |
gland of gut | 1.20e-08 | 24 |
pharynx | 1.52e-08 | 24 |
upper respiratory tract | 1.52e-08 | 24 |
chordate pharynx | 1.52e-08 | 24 |
pharyngeal arch system | 1.52e-08 | 24 |
pharyngeal region of foregut | 1.52e-08 | 24 |
respiratory tract | 9.54e-08 | 41 |
hematopoietic system | 1.16e-07 | 45 |
blood island | 1.16e-07 | 45 |
respiratory system | 1.28e-07 | 42 |
craniocervical region | 2.07e-07 | 36 |
hemolymphoid system | 2.42e-07 | 48 |
immune system | 2.42e-07 | 48 |
primordium | 5.62e-07 | 134 |