FFCP PHASE1:Mm9::chr18:82644572..82644588,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:82644572..82644588,+
|short_description=p4@Mbp
|description=CAGE_peak_4_at_Mbp_5end
|association_with_transcript=18bp_to_ENSMUST00000047865_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17196 | |EntrezGene=17196 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=P04370 | |UniProt=P04370 | ||
|association_with_transcript=18bp_to_ENSMUST00000047865_5end | |||
|cluster_id=chr18:82644572..82644588,+ | |||
|description=CAGE_peak_4_at_Mbp_5end | |||
|id=chr18:82644572..82644588,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.94e-07!9;CL:0000789!7.94e-07!9;CL:0002420!7.94e-07!9;CL:0002419!7.94e-07!9;CL:0000790!7.94e-07!9;CL:0002031!9.94e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.87e-08,25;CL:0000791,4.46e-08,9;CL:0000789,4.46e-08,9;CL:0002420,4.46e-08,9;CL:0002419,4.46e-08,9;CL:0000790,4.46e-08,9;CL:0000838,1.99e-07,12;CL:0000624,2.69e-07,8;CL:0000084,7.59e-07,11;CL:0000827,7.59e-07,11;CL:0000988,9.77e-07,32;CL:0002032,9.77e-07,32;CL:0000037,9.77e-07,32;CL:0000837,9.77e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!3.52e-09!99;UBERON:0005409!5.37e-08!59;UBERON:0001007!1.15e-07!128;UBERON:0001555!1.15e-07!128;UBERON:0007026!1.15e-07!128;UBERON:0004119!1.62e-07!130;UBERON:0000925!1.62e-07!130;UBERON:0006595!1.62e-07!130;UBERON:0004921!1.69e-07!126;UBERON:0004185!1.69e-07!126;UBERON:0002193!2.17e-07!48;UBERON:0002390!3.70e-07!45;UBERON:0003061!3.70e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-08,45;UBERON:0003061,1.58e-08,45;UBERON:0002193,2.00e-08,48;UBERON:0002405,2.00e-08,48;UBERON:0000077,1.98e-07,35;UBERON:0004921,2.26e-07,114;UBERON:0001007,2.66e-07,116;UBERON:0001555,2.66e-07,116;UBERON:0007026,2.66e-07,116;UBERON:0004119,3.15e-07,118;UBERON:0000925,3.15e-07,118;UBERON:0006595,3.15e-07,118;UBERON:0004177,4.10e-07,29;UBERON:0005057,4.10e-07,29 | |||
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| ||
|short_description=p4@Mbp | |||
}} | }} |
Latest revision as of 18:54, 1 October 2015
Short description: | p4@Mbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 18bp_to_ENSMUST00000047865_5end |
EntrezGene: | Mbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.87e-08 | 25 |
mature alpha-beta T cell | 4.46e-08 | 9 |
alpha-beta T cell | 4.46e-08 | 9 |
immature T cell | 4.46e-08 | 9 |
mature T cell | 4.46e-08 | 9 |
immature alpha-beta T cell | 4.46e-08 | 9 |
lymphoid lineage restricted progenitor cell | 1.99e-07 | 12 |
CD4-positive, alpha-beta T cell | 2.69e-07 | 8 |
T cell | 7.59e-07 | 11 |
pro-T cell | 7.59e-07 | 11 |
hematopoietic cell | 9.77e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.77e-07 | 32 |
hematopoietic stem cell | 9.77e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.77e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-08 | 45 |
blood island | 1.58e-08 | 45 |
hemolymphoid system | 2.00e-08 | 48 |
immune system | 2.00e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 1.98e-07 | 35 |
subdivision of digestive tract | 2.26e-07 | 114 |
digestive system | 2.66e-07 | 116 |
digestive tract | 2.66e-07 | 116 |
primitive gut | 2.66e-07 | 116 |
endoderm-derived structure | 3.15e-07 | 118 |
endoderm | 3.15e-07 | 118 |
presumptive endoderm | 3.15e-07 | 118 |
hemopoietic organ | 4.10e-07 | 29 |
immune organ | 4.10e-07 | 29 |