FFCP PHASE1:Mm9::chr1:91827728..91827743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14472 | |EntrezGene=14472 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=P48031 | |UniProt=P48031 | ||
|association_with_transcript=7bp_to_NM_010262,uc007bzb.1_5end | |association_with_transcript=7bp_to_NM_010262,uc007bzb.1_5end | ||
|cluster_id=chr1:91827728..91827743,- | |||
|description=CAGE_peak_2_at_Gbx2_5end | |description=CAGE_peak_2_at_Gbx2_5end | ||
|id=chr1:91827728..91827743,- | |id=chr1:91827728..91827743,- | ||
|ontology_enrichment_celltype=CL:0002319!4.55e-14!43;CL:0000221!1.56e-13!44;CL:0000133!1.56e-13!44;CL:0000117!1.23e-11!23;CL:0000337!1.23e-11!23;CL:0000055!8.37e-11!50;CL:0000540!1.35e-10!33;CL:0000047!1.35e-10!33;CL:0000031!1.35e-10!33;CL:0000404!1.35e-10!33;CL:0000393!6.09e-08!39;CL:0000211!6.09e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.36e-20,23;CL:0000337,3.36e-20,23;CL:0002319,9.92e-20,43;CL:0000221,3.41e-19,44;CL:0000133,3.41e-19,44;CL:0000540,1.38e-15,33;CL:0000047,1.38e-15,33;CL:0000031,1.38e-15,33;CL:0000404,1.38e-15,33;CL:0000393,9.73e-13,39;CL:0000211,9.73e-13,39;CL:0002613,5.72e-11,3;CL:0002321,1.22e-10,70;CL:0000120,6.96e-10,3;CL:0002612,7.46e-10,3;CL:0002610,5.26e-09,3;CL:0000878,1.78e-07,2;CL:0000129,1.78e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.18e-09!75;UBERON:0001016!1.18e-09!75;UBERON:0001017!1.32e-09!73;UBERON:0005743!1.32e-09!73;UBERON:0000369!8.02e-07!5;UBERON:0002435!8.02e-07!5;UBERON:0000204!8.02e-07!5;UBERON:0010082!8.02e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-14,73;UBERON:0001016,9.72e-14,75;UBERON:0004121,4.21e-11,95;UBERON:0000924,4.21e-11,95;UBERON:0006601,4.21e-11,95;UBERON:0000369,1.45e-10,5;UBERON:0002435,1.45e-10,5;UBERON:0000204,1.45e-10,5;UBERON:0010082,1.45e-10,5;UBERON:0001948,4.60e-10,5;UBERON:0002315,4.60e-10,5;UBERON:0002257,7.46e-10,3;UBERON:0004684,5.26e-09,3;UBERON:0002275,5.26e-09,3;UBERON:0002240,2.15e-08,6;UBERON:0005174,2.15e-08,6;UBERON:0001137,2.15e-08,6;UBERON:0000073,4.76e-08,54 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.388859798148567,0.699932108126813,8.62515386189829,0,0,0,0,0,0,1.41621522601718,2.11596391708813,3.80298842103708,1.35537812827653,0.889294796111139,0,0,0,2.39680088414724,4.2264013585371,0,0,0,0.856952953211411,1.76694832761291,0.61245399607477,0.287536413054709,0,1.10115880999389,1.40456071893706,1.38245879930619,40.8847491963601,33.2100146276747,25.0038417867245,0,0.56276261003168,0,2.65165726926301,1.42371680799103,2.05039390407831,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0.599162557619291,0.915001205637253,1.00523481690292,0,0,1.45451631191692,1.1356888414743,0,0,0,0,0,0,0,0,0.476255494059295,1.2811372028485,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.94652465824877,0.390438744296638,2.36965737506079,0,0,0,0,0.292255857911312,0,0,2.12910127812403,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.764384908931,4.38927360741134,3.92687293234509,0.729320151204882,1.46729213839588,0.367687016900028,0.888986911206461,0.824140228955577,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.640251524048693,0.631790158511746,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.658765662907314,0.507687647350059,0.73171189149109,0.526139422875686,0.271608227691724,1.12228454331548,0.830445126869219,0.591026894253381,0.818462086339379,0.154936841185966,0.964533054905707,1.24905288968973,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.388859798148567,0.699932108126813,8.62515386189829,0,0,0,0,0,0,1.41621522601718,2.11596391708813,3.80298842103708,1.35537812827653,0.889294796111139,0,0,0,2.39680088414724,4.2264013585371,0,0,0,0.856952953211411,1.76694832761291,0.61245399607477,0.287536413054709,0,1.10115880999389,1.40456071893706,1.38245879930619,40.8847491963601,33.2100146276747,25.0038417867245,0,0.56276261003168,0,2.65165726926301,1.42371680799103,2.05039390407831,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0.599162557619291,0.915001205637253,1.00523481690292,0,0,1.45451631191692,1.1356888414743,0,0,0,0,0,0,0,0,0.476255494059295,1.2811372028485,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0.94652465824877,0.390438744296638,2.36965737506079,0,0,0,0,0.292255857911312,0,0,2.12910127812403,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.764384908931,4.38927360741134,3.92687293234509,0.729320151204882,1.46729213839588,0.367687016900028,0.888986911206461,0.824140228955577,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.640251524048693,0.631790158511746,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.658765662907314,0.507687647350059,0.73171189149109,0.526139422875686,0.271608227691724,1.12228454331548,0.830445126869219,0.591026894253381,0.818462086339379,0.154936841185966,0.964533054905707,1.24905288968973,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p2@Gbx2 | |short_description=p2@Gbx2 | ||
}} | }} |
Latest revision as of 18:56, 1 October 2015
Short description: | p2@Gbx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gbx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 7bp_to_NM_010262, uc007bzb.1_5end |
EntrezGene: | Gbx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.36e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.36e-20 | 23 |
neural cell | 9.92e-20 | 43 |
ectodermal cell | 3.41e-19 | 44 |
neurectodermal cell | 3.41e-19 | 44 |
neuron | 1.38e-15 | 33 |
neuronal stem cell | 1.38e-15 | 33 |
neuroblast | 1.38e-15 | 33 |
electrically signaling cell | 1.38e-15 | 33 |
electrically responsive cell | 9.73e-13 | 39 |
electrically active cell | 9.73e-13 | 39 |
striatum neuron | 5.72e-11 | 3 |
embryonic cell | 1.22e-10 | 70 |
granule cell | 6.96e-10 | 3 |
neuron of the ventral spinal cord | 7.46e-10 | 3 |
raphe nuclei neuron | 5.26e-09 | 3 |
central nervous system macrophage | 1.78e-07 | 2 |
microglial cell | 1.78e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.10e-14 | 73 |
nervous system | 9.72e-14 | 75 |
ectoderm-derived structure | 4.21e-11 | 95 |
ectoderm | 4.21e-11 | 95 |
presumptive ectoderm | 4.21e-11 | 95 |
corpus striatum | 1.45e-10 | 5 |
striatum | 1.45e-10 | 5 |
ventral part of telencephalon | 1.45e-10 | 5 |
future corpus striatum | 1.45e-10 | 5 |
regional part of spinal cord | 4.60e-10 | 5 |
gray matter of spinal cord | 4.60e-10 | 5 |
ventral horn of spinal cord | 7.46e-10 | 3 |
raphe nuclei | 5.26e-09 | 3 |
reticular formation | 5.26e-09 | 3 |
spinal cord | 2.15e-08 | 6 |
dorsal region element | 2.15e-08 | 6 |
dorsum | 2.15e-08 | 6 |
regional part of nervous system | 4.76e-08 | 54 |