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FFCP PHASE1:Mm9::chr1:94727911..94727952,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14733
|EntrezGene=14733
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9QZF2
|UniProt=Q9QZF2
|association_with_transcript=-269bp_to_ENSMUST00000045970_5end
|association_with_transcript=-269bp_to_ENSMUST00000045970_5end
|cluster_id=chr1:94727911..94727952,+
|description=CAGE_peak_4_at_Gpc1_5end
|description=CAGE_peak_4_at_Gpc1_5end
|id=chr1:94727911..94727952,+
|id=chr1:94727911..94727952,+
|ontology_enrichment_celltype=CL:0000221!2.02e-15!44;CL:0000133!2.02e-15!44;CL:0002319!2.21e-15!43;CL:0000540!7.45e-15!33;CL:0000047!7.45e-15!33;CL:0000031!7.45e-15!33;CL:0000404!7.45e-15!33;CL:0000055!1.08e-11!50;CL:0000117!1.13e-11!23;CL:0000337!1.13e-11!23;CL:0000393!1.35e-11!39;CL:0000211!1.35e-11!39
|ontology_enrichment_celltype=CL:0000221!2.02e-15!44;CL:0000133!2.02e-15!44;CL:0002319!2.21e-15!43;CL:0000540!7.45e-15!33;CL:0000047!7.45e-15!33;CL:0000031!7.45e-15!33;CL:0000404!7.45e-15!33;CL:0000055!1.08e-11!50;CL:0000117!1.13e-11!23;CL:0000337!1.13e-11!23;CL:0000393!1.35e-11!39;CL:0000211!1.35e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.26e-15,44;CL:0000133,1.26e-15,44;CL:0002319,1.38e-15,43;CL:0000540,2.95e-15,33;CL:0000047,2.95e-15,33;CL:0000031,2.95e-15,33;CL:0000404,2.95e-15,33;CL:0000117,5.57e-12,23;CL:0000337,5.57e-12,23;CL:0000393,9.00e-12,39;CL:0000211,9.00e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.74e-21!75;UBERON:0001016!1.74e-21!75;UBERON:0001017!9.40e-21!73;UBERON:0005743!9.40e-21!73;UBERON:0004121!1.05e-19!102;UBERON:0000924!1.05e-19!102;UBERON:0006601!1.05e-19!102;UBERON:0002346!4.92e-15!71;UBERON:0003075!4.92e-15!71;UBERON:0007284!4.92e-15!71;UBERON:0001049!6.30e-14!52;UBERON:0005068!6.30e-14!52;UBERON:0006241!6.30e-14!52;UBERON:0007135!6.30e-14!52;UBERON:0003056!1.36e-13!49;UBERON:0000033!1.38e-13!63;UBERON:0002020!9.17e-13!34;UBERON:0003080!1.24e-11!40;UBERON:0002616!1.67e-11!49;UBERON:0000955!1.87e-11!50;UBERON:0006238!1.87e-11!50;UBERON:0002780!2.07e-11!39;UBERON:0001890!2.07e-11!39;UBERON:0006240!2.07e-11!39;UBERON:0002791!4.59e-10!29;UBERON:0003528!4.59e-10!29;UBERON:0001893!4.59e-10!29;UBERON:0000153!3.07e-08!94;UBERON:0000956!8.14e-08!21;UBERON:0001869!8.14e-08!21;UBERON:0000203!8.14e-08!21;UBERON:0000468!1.92e-07!333;UBERON:0007811!4.71e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.94e-22,95;UBERON:0000924,8.94e-22,95;UBERON:0006601,8.94e-22,95;UBERON:0001016,9.95e-22,75;UBERON:0001017,5.61e-21,73;UBERON:0002346,4.41e-17,64;UBERON:0003075,4.41e-17,64;UBERON:0007284,4.41e-17,64;UBERON:0010314,5.93e-17,92;UBERON:0010371,1.86e-15,73;UBERON:0000073,3.62e-14,54;UBERON:0001049,5.68e-14,52;UBERON:0005068,5.68e-14,52;UBERON:0006241,5.68e-14,52;UBERON:0007135,5.68e-14,52;UBERON:0003056,1.32e-13,49;UBERON:0002020,4.20e-13,34;UBERON:0003080,8.61e-12,40;UBERON:0002780,1.45e-11,39;UBERON:0001890,1.45e-11,39;UBERON:0006240,1.45e-11,39;UBERON:0002616,5.79e-11,46;UBERON:0000955,6.49e-11,47;UBERON:0006238,6.49e-11,47;UBERON:0003528,2.54e-10,29;UBERON:0002791,2.54e-10,29;UBERON:0001893,2.54e-10,29;UBERON:0000956,5.26e-08,21;UBERON:0001869,5.26e-08,21;UBERON:0000203,5.26e-08,21
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|phase1_expression=5.2849119544582,0,0,0,0,0.33575854382378,0.233612640595526,1.29123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0.717949430958028,0.342401459862411,0.262261207256992,0,0,0,0.157731082679119,0.137114433605739,0,2.12608225377674,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0,0,0,0,0,1.67412652294763,2.3440060335714,1.57057123192139,0.588231488031014,1.36609096991689,1.45653105909346,0.629484089877886,1.21652317463417,2.38610777810186,0.782391344348039,6.1047043786525,4.39372365468944,4.6663175777828,2.51975558925653,5.75010257459886,0,0,0.336093799142464,1.28629718017973,1.43266719969378,1.54701627683233,24.4802917640113,23.2756030879694,21.5502677192101,5.42151251310611,1.77858959222228,1.3498495759221,0.988866362566974,2.8419204597844,5.99200221036809,5.76327457982332,22.6043354832481,25.2461104680262,23.5563956713548,11.9973413449598,9.05561017901615,24.7431414414207,19.456630616702,38.6071890376209,11.0115880999389,4.59674417106676,3.37934373163736,17.8046488435762,12.0763689555181,15.6274011167028,5.02529398202486,2.8138130501584,4.27835093775068,9.42811473515737,9.96601765593721,16.2167517868012,6.36100023998746,6.2724394888632,1.15945795480671,0,0,0,0,0,0.842666520790511,1.1930122580464,1.81850203222008,2.47337702157238,4.64783285263046,2.56652954828636,10.1922095882658,0,1.94841936910093,3.29367825117628,3.53867111510348,0.79928715803342,0.258937883647172,0.742210695324124,3.64319186208885,3.34912026143355,0.922461989024234,2.11011696773672,2.70454026412121,0.628332956648377,2.47194967734374,0.86759614151947,0.884610551949874,6.95597454773859,3.97514733228708,1.45462575940567,0,1.46390398505774,2.30391377494801,0,0.479260498023681,0,1.01656181658452,5.54225365797844,5.03250663100489,16.3350657746724,11.4724051326902,5.37002460393694,2.90903262383384,3.56930778749067,4.68461073711455,1.8661045591514,2.27450482590307,0.841767423545896,8.71806967850115,8.04657365517155,9.36323074987816,5.27466862425003,7.96027040070536,6.02134485338794,8.05834831213668,2.58703370739016,12.7185115830377,10.4008344092301,7.38994721488585,7.89104636739269,3.05851974148158,7.66154766348766,1.85203922767149,5.57295947091781,2.1066395619397,0.772043721344145,1.42081749697796,8.49215667395558,6.3322036194896,6.48223421259654,8.04932100989715,9.24791889212798,6.17068451549513,4.41814495025775,7.77992864058896,4.67061369468678,5.10135534731789,2.79084688934462,3.56702762001765,1.90059983652932,3.51280184465681,3.08674763148855,7.36014819974445,13.9950272835827,0,0.264450566663544,8.10495352033889,3.71578674976702,3.60828891701861,1.61346819698674,2.89091456998331,1.14135375667535,0,0.988193728344065,0.754005626400808,0.596869416123452,0.974820435595601,0.898819408654221,0.216138049874694,0,6.63837653335786,4.45569199177942,7.88954149711563,4.88763186828754,2.52138233317913,3.36651935473529,1.20149420536089,0.295220295959204,0.31399745568275,0.863780147452604,0.296452627087149,1.66845105716094,0.589676985339609,0.224862112384854,0.811440485554012,0.241177159752417,0,0,0.324270453550071,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,3.97931964718018,2.77040459951444,4.2436271443797,2.11221223459652,2.34508760418542,1.42826184531608,2.34160377429359,0.630540576424764,1.32878813789265,0.637819074629948,0.983179888294428,1.55416483679306,0.289298117163023,0,1.08781136763742,0,1.37968373152366,6.42202359951168,3.39913891117389,2.13115428989678,4.54447668967871,7.2566890465739,5.46614242015294,8.18608911384636,6.69112634267146,5.79276552614225,9.90767857760913,7.69140333182299,8.47541987942804,5.13874111330481,3.53453448063988,2.83880170416537,6.58842733568844,7.32991317091092,4.12425307431339,0,4.12727081463468,1.209294227859,0.377210159511796,0.590603785761546,1.53717573971964,1.80899805217755,0.727067458955011,0.712994756769443,0,1.05418608574999,0,0.680879211507576,11.1637878299412,7.76152102696527,6.85878512101095,5.32020700926821,8.20496560969525,3.9491764944509,8.22055362609418,4.69343416127421,15.8874053147865,0,3.79238381765404,1.77610869365496,2.23157822234177,2.626191568069,2.29797259643086,0.291480836629851,6.67531087237835,0.683483523191411,2.47664241555867,1.11116716421827,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0.954670618015114,9.49007980743406,3.45643094115643,2.16010681643603,1.88179466413022,2.18362563746178,2.42755823492677,1.48776220305605,0.785267825952089,0.648074866458964,1.86401793926078,1.69107881605257,5.98066184175915,4.79829622325583,7.19469396872976,5.03723311563151,5.23763989021412,6.92407708009948,2.604087696879,1.99232754408851,0.724752362478018,0.576060012515731,2.52808896502543,4.25722952109345,1.43795340030758,0.909445760844565,1.25318686967237,1.98681354781265,1.32214994471966,1.32920574457119,1.11063094942962,1.447929326445,0.907435666231565,0.974578807397524,0.481059208201647,0.935015217452552,4.30787728868902,8.65745218158852,5.65197296639697,9.73730774911655,0.772758376128762,2.064507229963,2.74727436400898,2.14368379079066,0.501572104035363,6.21227026878773,5.06357760157895,8.02053718815155,12.3734291287455,2.05524755931193,8.3093328712867,4.05013500139084,4.95353323546643,1.81256963593682,7.24864436452548,5.39694207437719,16.3600198094423,9.39034831647738,6.32077464377565,3.5634237646757,5.33146174505041,5.11167473943715,6.18105171716683,5.13470735346904,3.79045817645696,6.08350319736575,4.52703219326583,5.52484894072306,6.01836432605771,5.68611142660571,5.23923060411381,7.76424983830532,5.20854895252004,7.00546031365621,4.26876868389752,4.4573002810104,3.19456451086807,4.76872379894642,4.0696996657052,4.70546902076653,4.39995961036718,3.10977553883713,4.73525480588117,4.88894809845102,5.05028044491965,4.98267076121531,5.22073756590486,5.32000356120596,4.49316839439301,4.43685205256625,11.7410971630835,5.38042699424439,5.58664740525576,10.3295699317175,4.41182838239031,5.79669589051054
|short_description=p4@Gpc1
|short_description=p4@Gpc1
}}
}}

Latest revision as of 19:37, 1 October 2015

Short description:p4@Gpc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gpc1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -269bp_to_ENSMUST00000045970_5end
EntrezGene:Gpc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gpc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C324.48
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F525.25
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D638.61
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.22
Mouse Schwann, donor1.CNhs12507.11728-123D96.36
Mouse Schwann, donor2.CNhs12573.11746-123F96.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.96
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F116.34
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C68.72
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G88.06
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E212.72
forelimb, embryo E12.CNhs10600.359-14H210.40
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D48.05
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G114.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E611.16
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G315.89
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B76.92
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.74
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I85.40
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C610.33
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.26e-1544
neurectodermal cell1.26e-1544
neural cell1.38e-1543
neuron2.95e-1533
neuronal stem cell2.95e-1533
neuroblast2.95e-1533
electrically signaling cell2.95e-1533
CNS neuron (sensu Vertebrata)5.57e-1223
neuroblast (sensu Vertebrata)5.57e-1223
electrically responsive cell9.00e-1239
electrically active cell9.00e-1239

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure8.94e-2295
ectoderm8.94e-2295
presumptive ectoderm8.94e-2295
nervous system9.95e-2275
central nervous system5.61e-2173
neurectoderm4.41e-1764
neural plate4.41e-1764
presumptive neural plate4.41e-1764
structure with developmental contribution from neural crest5.93e-1792
ecto-epithelium1.86e-1573
regional part of nervous system3.62e-1454
neural tube5.68e-1452
neural rod5.68e-1452
future spinal cord5.68e-1452
neural keel5.68e-1452
pre-chordal neural plate1.32e-1349
gray matter4.20e-1334
anterior neural tube8.61e-1240
regional part of forebrain1.45e-1139
forebrain1.45e-1139
future forebrain1.45e-1139
regional part of brain5.79e-1146
brain6.49e-1147
future brain6.49e-1147
brain grey matter2.54e-1029
regional part of telencephalon2.54e-1029
telencephalon2.54e-1029
cerebral cortex5.26e-0821
cerebral hemisphere5.26e-0821
pallium5.26e-0821
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