FFCP PHASE1:Mm9::chr8:23704289..23704300,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22335 | |EntrezGene=22335 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q5EBQ0,Q3TX38,Q60931 | |UniProt=Q5EBQ0,Q3TX38,Q60931 | ||
|association_with_transcript=-4bp_to_NM_001198998,NM_011696,uc009ldh.2,uc012gbf.1_5end | |association_with_transcript=-4bp_to_NM_001198998,NM_011696,uc009ldh.2,uc012gbf.1_5end | ||
|cluster_id=chr8:23704289..23704300,- | |||
|description=CAGE_peak_3_at_Vdac3_5end | |description=CAGE_peak_3_at_Vdac3_5end | ||
|id=chr8:23704289..23704300,- | |id=chr8:23704289..23704300,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.15e-08,23;CL:0000337,7.15e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.01e-13,14;UBERON:0000991,4.49e-13,18;UBERON:0005564,4.49e-13,18;UBERON:0003135,4.95e-12,15;UBERON:0004176,6.78e-12,17;UBERON:0009196,6.78e-12,17;UBERON:0009117,6.78e-12,17;UBERON:0003101,4.43e-11,16;UBERON:0000079,4.43e-11,16;UBERON:0003133,3.90e-10,24;UBERON:0005156,4.73e-09,26;UBERON:0000990,4.73e-09,26;UBERON:0001948,3.33e-08,5;UBERON:0002315,3.33e-08,5 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0.60492842261366,1.00179145989269,0.503637815735669,0,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0,1.9559956734746,0.198581902401771,0.783599367416806,0.319984845586813,0.91763712426868,0,0.430761996159075,0.646413698057667,0,0.756090389279792,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0.408338712524738,0.418531630736908,0.7813353445238,0,1.17646297606203,0,1.45653105909346,0.503587271902309,0.304130793658544,0.550640256485045,0,1.30815093828268,0.219686182734472,0.972149495371417,0.839918529752175,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,1.01158230429799,2.11596391708813,1.26766280701236,0.338844532069132,1.77858959222228,0.899899717281399,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.135005938331691,0.630974884054146,5.14171771926846,3.75476519617743,0.122490799214954,0.287536413054709,0,1.10115880999389,1.53224805702225,1.22885226604995,0.659431438650969,1.55528994124096,0,0.558365998002762,2.25105044012672,0.916789486660861,3.53554302568401,2.70506193518296,1.3047961207771,0.832988126665025,1.20914496170857,0,0.860423876981386,0,1.07940638327563,1.29955283489534,0.448026887097336,0.702222100658759,0.852151612890289,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.79928715803342,0,0.148442139064825,1.04091196059682,0.608930956624282,0.922461989024234,0.904335843315735,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,0,1.13236794963186,0.220841518460394,0.484875253135222,5.59175283654366,0,0.41889341362691,0,0.359445373517761,0,0.127070227073065,0.449371918214468,0,0.125654352112864,0,0.255715457330331,0.20778804455956,1.1356888414743,0.407357455401265,0.248813941220186,0,0,0,0.229902104433473,0,0.150704817835715,0.408218994907967,1.0249097622788,0.187403449119458,0.776110112217047,0.431135985865684,0.189106080167819,0.351902248327898,0,0,0.696504333044333,0,2.18937693500343,0.702213187313235,1.02939162845886,0.284163499395593,0.414251545071004,0.703578179943289,1.2604344302271,0.946978942340841,0.590292695242212,0.925602677324269,0.232533944750408,0.804820204198858,0.583826711835847,0.658239399653922,0.656669856316381,1.13496333364198,1.02339991197733,0.878200461164203,0.536825675041487,0.420579897128254,0.205809224758569,0,1.58670339998127,0.639864751605702,0,0.257734922644187,0.605050573870028,0.444756087689741,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,0.898819408654221,2.37751854862164,0.995706366271836,0.379335801906163,0.456994050438915,0,0.407302655690628,0.193952487167626,0.420814919341911,0.189709611372772,0.295220295959204,0,0.370191491765402,0,0.83422552858047,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,1.15078454980324,0.486405680325106,0.549122826376163,1.43768206527355,0,1.24815069245824,0.757736633841335,0.538192240565737,0.482443521363367,0.184753190166605,0.568474235311454,0.488894929326078,0.678980343100753,0.704070744865506,0.502518772325447,0,0.390267295715598,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0.275936746304732,1.9266070798535,0.820481806145422,0.163934945376675,1.76729649043061,0.94652465824877,1.17131623288992,0.646270193198397,0.716906393857656,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,1.06839362200353,0.977321756121456,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,1.06949213515416,0,0,0,0,0.540183282093931,0.517434735131018,0,0.709360934569094,0,0.493647061806363,0.304464949114599,0,1.0591603543191,0,0.49465875882444,0.161464426695906,0.301564624640779,0,0,0.291480836629851,0.741701208042039,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.552799895217695,0,0.316335993581135,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.330613822901344,0.26175594198403,15.035336901848,0.621339313086926,11.837551712368,5.38259565758324,5.29467169462712,3.69457257853691,4.52059382172059,5.06868376472335,4.5769323071844,4.03633593016245,3.04092098834561,3.14059357073808,5.76060012515731,0,1.21635129174099,0.410843828659309,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,1.33191572024439,1.07656627931371,2.3503846290971,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,2.02506750069542,0,0,1.03552062350364,0.518936737920883,0,0.512200817262403,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.943131706930381,0.468207537349412,0.512201219238954,0.631790158511746,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0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| |phase1_expression=0.480446541314382,0.348975407639361,0,0.60492842261366,1.00179145989269,0.503637815735669,0,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,0,1.9559956734746,0.198581902401771,0.783599367416806,0.319984845586813,0.91763712426868,0,0.430761996159075,0.646413698057667,0,0.756090389279792,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0.408338712524738,0.418531630736908,0.7813353445238,0,1.17646297606203,0,1.45653105909346,0.503587271902309,0.304130793658544,0.550640256485045,0,1.30815093828268,0.219686182734472,0.972149495371417,0.839918529752175,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,1.01158230429799,2.11596391708813,1.26766280701236,0.338844532069132,1.77858959222228,0.899899717281399,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.135005938331691,0.630974884054146,5.14171771926846,3.75476519617743,0.122490799214954,0.287536413054709,0,1.10115880999389,1.53224805702225,1.22885226604995,0.659431438650969,1.55528994124096,0,0.558365998002762,2.25105044012672,0.916789486660861,3.53554302568401,2.70506193518296,1.3047961207771,0.832988126665025,1.20914496170857,0,0.860423876981386,0,1.07940638327563,1.29955283489534,0.448026887097336,0.702222100658759,0.852151612890289,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.79928715803342,0,0.148442139064825,1.04091196059682,0.608930956624282,0.922461989024234,0.904335843315735,0.352766121407114,0.125666591329675,0.247194967734374,0.433798070759735,0,1.13236794963186,0.220841518460394,0.484875253135222,5.59175283654366,0,0.41889341362691,0,0.359445373517761,0,0.127070227073065,0.449371918214468,0,0.125654352112864,0,0.255715457330331,0.20778804455956,1.1356888414743,0.407357455401265,0.248813941220186,0,0,0,0.229902104433473,0,0.150704817835715,0.408218994907967,1.0249097622788,0.187403449119458,0.776110112217047,0.431135985865684,0.189106080167819,0.351902248327898,0,0,0.696504333044333,0,2.18937693500343,0.702213187313235,1.02939162845886,0.284163499395593,0.414251545071004,0.703578179943289,1.2604344302271,0.946978942340841,0.590292695242212,0.925602677324269,0.232533944750408,0.804820204198858,0.583826711835847,0.658239399653922,0.656669856316381,1.13496333364198,1.02339991197733,0.878200461164203,0.536825675041487,0.420579897128254,0.205809224758569,0,1.58670339998127,0.639864751605702,0,0.257734922644187,0.605050573870028,0.444756087689741,0.570676878337677,0.949058123089023,0.329397909448022,0.251335208800269,0.795825888164603,0.779856348476481,0.898819408654221,2.37751854862164,0.995706366271836,0.379335801906163,0.456994050438915,0,0.407302655690628,0.193952487167626,0.420814919341911,0.189709611372772,0.295220295959204,0,0.370191491765402,0,0.83422552858047,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,1.15078454980324,0.486405680325106,0.549122826376163,1.43768206527355,0,1.24815069245824,0.757736633841335,0.538192240565737,0.482443521363367,0.184753190166605,0.568474235311454,0.488894929326078,0.678980343100753,0.704070744865506,0.502518772325447,0,0.390267295715598,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0.275936746304732,1.9266070798535,0.820481806145422,0.163934945376675,1.76729649043061,0.94652465824877,1.17131623288992,0.646270193198397,0.716906393857656,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,1.06839362200353,0.977321756121456,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,1.06949213515416,0,0,0,0,0.540183282093931,0.517434735131018,0,0.709360934569094,0,0.493647061806363,0.304464949114599,0,1.0591603543191,0,0.49465875882444,0.161464426695906,0.301564624640779,0,0,0.291480836629851,0.741701208042039,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.552799895217695,0,0.316335993581135,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.330613822901344,0.26175594198403,15.035336901848,0.621339313086926,11.837551712368,5.38259565758324,5.29467169462712,3.69457257853691,4.52059382172059,5.06868376472335,4.5769323071844,4.03633593016245,3.04092098834561,3.14059357073808,5.76060012515731,0,1.21635129174099,0.410843828659309,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,1.33191572024439,1.07656627931371,2.3503846290971,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,2.02506750069542,0,0,1.03552062350364,0.518936737920883,0,0.512200817262403,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.943131706930381,0.468207537349412,0.512201219238954,0.631790158511746,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0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| ||
|short_description=p3@Vdac3 | |short_description=p3@Vdac3 | ||
}} | }} |
Latest revision as of 20:13, 1 October 2015
Short description: | p3@Vdac3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vdac3_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_NM_001198998, NM_011696, uc009ldh.2, uc012gbf.1_5end |
EntrezGene: | Vdac3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.15e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.15e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
testis | 4.01e-13 | 14 |
gonad | 4.49e-13 | 18 |
gonad primordium | 4.49e-13 | 18 |
male reproductive organ | 4.95e-12 | 15 |
external genitalia | 6.78e-12 | 17 |
indifferent external genitalia | 6.78e-12 | 17 |
indifferent gonad | 6.78e-12 | 17 |
male organism | 4.43e-11 | 16 |
male reproductive system | 4.43e-11 | 16 |
reproductive organ | 3.90e-10 | 24 |
reproductive structure | 4.73e-09 | 26 |
reproductive system | 4.73e-09 | 26 |
regional part of spinal cord | 3.33e-08 | 5 |
gray matter of spinal cord | 3.33e-08 | 5 |