FFCP PHASE1:Mm9::chr19:10257527..10257538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76267 | |EntrezGene=76267 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3169 | |||
|TSSclassifier=NA | |||
|UniProt=Q920L1 | |UniProt=Q920L1 | ||
|association_with_transcript=149bp_to_ENSMUST00000010807,NM_146094,uc008gpd.2,uc008gpe.2_5end | |association_with_transcript=149bp_to_ENSMUST00000010807,NM_146094,uc008gpd.2,uc008gpe.2_5end | ||
|cluster_id=chr19:10257527..10257538,+ | |||
|description=CAGE_peak_3_at_Fads1_5end | |description=CAGE_peak_3_at_Fads1_5end | ||
|id=chr19:10257527..10257538,+ | |id=chr19:10257527..10257538,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-15!50;CL:0002319!2.80e-15!43;CL:0000221!3.67e-15!44;CL:0000133!3.67e-15!44;CL:0002321!2.10e-12!70;CL:0000220!2.10e-12!70;CL:0000393!1.35e-11!39;CL:0000211!1.35e-11!39;CL:0000540!2.79e-11!33;CL:0000047!2.79e-11!33;CL:0000031!2.79e-11!33;CL:0000404!2.79e-11!33;CL:0000117!2.73e-08!23;CL:0000337!2.73e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.03e-15!50;CL:0002319!2.80e-15!43;CL:0000221!3.67e-15!44;CL:0000133!3.67e-15!44;CL:0002321!2.10e-12!70;CL:0000220!2.10e-12!70;CL:0000393!1.35e-11!39;CL:0000211!1.35e-11!39;CL:0000540!2.79e-11!33;CL:0000047!2.79e-11!33;CL:0000031!2.79e-11!33;CL:0000404!2.79e-11!33;CL:0000117!2.73e-08!23;CL:0000337!2.73e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.00e-15,43;CL:0000221,2.62e-15,44;CL:0000133,2.62e-15,44;CL:0002321,9.88e-13,70;CL:0000393,1.05e-11,39;CL:0000211,1.05e-11,39;CL:0000540,2.19e-11,33;CL:0000047,2.19e-11,33;CL:0000031,2.19e-11,33;CL:0000404,2.19e-11,33;CL:0000117,2.31e-08,23;CL:0000337,2.31e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.05e-19!102;UBERON:0000924!1.05e-19!102;UBERON:0006601!1.05e-19!102;UBERON:0001017!1.71e-18!73;UBERON:0005743!1.71e-18!73;UBERON:0000073!2.86e-18!75;UBERON:0001016!2.86e-18!75;UBERON:0002346!5.63e-17!71;UBERON:0003075!5.63e-17!71;UBERON:0007284!5.63e-17!71;UBERON:0001049!6.44e-11!52;UBERON:0005068!6.44e-11!52;UBERON:0006241!6.44e-11!52;UBERON:0007135!6.44e-11!52;UBERON:0000025!7.76e-10!114;UBERON:0000033!6.14e-09!63;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0002616!1.25e-08!49;UBERON:0002020!1.88e-08!34;UBERON:0004111!5.81e-08!122;UBERON:0003056!6.13e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.13e-18,73;UBERON:0001016,1.89e-18,75;UBERON:0004121,3.67e-16,95;UBERON:0000924,3.67e-16,95;UBERON:0006601,3.67e-16,95;UBERON:0002346,1.03e-13,64;UBERON:0003075,1.03e-13,64;UBERON:0007284,1.03e-13,64;UBERON:0010371,1.35e-11,73;UBERON:0000073,3.08e-11,54;UBERON:0001049,5.11e-11,52;UBERON:0005068,5.11e-11,52;UBERON:0006241,5.11e-11,52;UBERON:0007135,5.11e-11,52;UBERON:0010314,2.97e-10,92;UBERON:0000025,1.05e-09,114;UBERON:0002020,1.58e-08,34;UBERON:0000955,3.45e-08,47;UBERON:0006238,3.45e-08,47;UBERON:0002616,3.95e-08,46;UBERON:0003056,5.23e-08,49;UBERON:0004111,7.77e-08,122 | |||
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| ||
|short_description=p3@Fads1 | |short_description=p3@Fads1 | ||
}} | }} |
Latest revision as of 20:24, 1 October 2015
Short description: | p3@Fads1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fads1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3169 |
Association with transcript: | 149bp_to_ENSMUST00000010807, NM_146094, uc008gpd.2, uc008gpe.2_5end |
EntrezGene: | Fads1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.00e-15 | 43 |
ectodermal cell | 2.62e-15 | 44 |
neurectodermal cell | 2.62e-15 | 44 |
embryonic cell | 9.88e-13 | 70 |
electrically responsive cell | 1.05e-11 | 39 |
electrically active cell | 1.05e-11 | 39 |
neuron | 2.19e-11 | 33 |
neuronal stem cell | 2.19e-11 | 33 |
neuroblast | 2.19e-11 | 33 |
electrically signaling cell | 2.19e-11 | 33 |
CNS neuron (sensu Vertebrata) | 2.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.31e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.13e-18 | 73 |
nervous system | 1.89e-18 | 75 |
ectoderm-derived structure | 3.67e-16 | 95 |
ectoderm | 3.67e-16 | 95 |
presumptive ectoderm | 3.67e-16 | 95 |
neurectoderm | 1.03e-13 | 64 |
neural plate | 1.03e-13 | 64 |
presumptive neural plate | 1.03e-13 | 64 |
ecto-epithelium | 1.35e-11 | 73 |
regional part of nervous system | 3.08e-11 | 54 |
neural tube | 5.11e-11 | 52 |
neural rod | 5.11e-11 | 52 |
future spinal cord | 5.11e-11 | 52 |
neural keel | 5.11e-11 | 52 |
structure with developmental contribution from neural crest | 2.97e-10 | 92 |
tube | 1.05e-09 | 114 |
gray matter | 1.58e-08 | 34 |
brain | 3.45e-08 | 47 |
future brain | 3.45e-08 | 47 |
regional part of brain | 3.95e-08 | 46 |
pre-chordal neural plate | 5.23e-08 | 49 |
anatomical conduit | 7.77e-08 | 122 |