FFCP PHASE1:Mm9::chrX:56821245..56821271,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14168 | |EntrezGene=14168 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=B1AU20,B1AU23 | |UniProt=B1AU20,B1AU23 | ||
|association_with_transcript=0bp_to_ENSMUST00000119833,ENSMUST00000131319_5end | |association_with_transcript=0bp_to_ENSMUST00000119833,ENSMUST00000131319_5end | ||
|cluster_id=chrX:56821245..56821271,- | |||
|description=CAGE_peak_2_at_Fgf13_5end | |description=CAGE_peak_2_at_Fgf13_5end | ||
|id=chrX:56821245..56821271,- | |id=chrX:56821245..56821271,- | ||
|ontology_enrichment_celltype=CL:0000540!3.83e-15!33;CL:0000047!3.83e-15!33;CL:0000031!3.83e-15!33;CL:0000404!3.83e-15!33;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0002319!3.48e-10!43;CL:0000393!4.55e-10!39;CL:0000211!4.55e-10!39;CL:0000221!8.38e-10!44;CL:0000133!8.38e-10!44;CL:0000107!4.46e-07!9 | |ontology_enrichment_celltype=CL:0000540!3.83e-15!33;CL:0000047!3.83e-15!33;CL:0000031!3.83e-15!33;CL:0000404!3.83e-15!33;CL:0000117!1.14e-10!23;CL:0000337!1.14e-10!23;CL:0002319!3.48e-10!43;CL:0000393!4.55e-10!39;CL:0000211!4.55e-10!39;CL:0000221!8.38e-10!44;CL:0000133!8.38e-10!44;CL:0000107!4.46e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-17,33;CL:0000047,7.32e-17,33;CL:0000031,7.32e-17,33;CL:0000404,7.32e-17,33;CL:0000393,1.15e-11,39;CL:0000211,1.15e-11,39;CL:0000117,1.29e-11,23;CL:0000337,1.29e-11,23;CL:0002319,1.03e-10,43;CL:0000221,4.17e-10,44;CL:0000133,4.17e-10,44;CL:0000107,1.18e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.90e-15!73;UBERON:0005743!3.90e-15!73;UBERON:0000073!1.26e-14!75;UBERON:0001016!1.26e-14!75;UBERON:0004121!2.97e-12!102;UBERON:0000924!2.97e-12!102;UBERON:0006601!2.97e-12!102;UBERON:0002346!1.50e-11!71;UBERON:0003075!1.50e-11!71;UBERON:0007284!1.50e-11!71;UBERON:0001049!2.75e-09!52;UBERON:0005068!2.75e-09!52;UBERON:0006241!2.75e-09!52;UBERON:0007135!2.75e-09!52;UBERON:0003056!3.55e-09!49;UBERON:0000955!5.55e-08!50;UBERON:0006238!5.55e-08!50;UBERON:0000033!6.41e-08!63;UBERON:0003080!7.46e-08!40;UBERON:0002780!8.08e-08!39;UBERON:0001890!8.08e-08!39;UBERON:0006240!8.08e-08!39;UBERON:0002020!1.23e-07!34;UBERON:0002616!1.42e-07!49;UBERON:0007100!3.57e-07!18;UBERON:0000948!3.57e-07!18;UBERON:0005498!3.57e-07!18;UBERON:0004140!3.57e-07!18;UBERON:0009881!3.57e-07!18;UBERON:0004141!3.57e-07!18;UBERON:0003084!3.57e-07!18;UBERON:0007005!3.57e-07!18;UBERON:0004139!3.57e-07!18;UBERON:0004291!3.57e-07!18;UBERON:0002410!4.46e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!3.90e-15!73;UBERON:0005743!3.90e-15!73;UBERON:0000073!1.26e-14!75;UBERON:0001016!1.26e-14!75;UBERON:0004121!2.97e-12!102;UBERON:0000924!2.97e-12!102;UBERON:0006601!2.97e-12!102;UBERON:0002346!1.50e-11!71;UBERON:0003075!1.50e-11!71;UBERON:0007284!1.50e-11!71;UBERON:0001049!2.75e-09!52;UBERON:0005068!2.75e-09!52;UBERON:0006241!2.75e-09!52;UBERON:0007135!2.75e-09!52;UBERON:0003056!3.55e-09!49;UBERON:0000955!5.55e-08!50;UBERON:0006238!5.55e-08!50;UBERON:0000033!6.41e-08!63;UBERON:0003080!7.46e-08!40;UBERON:0002780!8.08e-08!39;UBERON:0001890!8.08e-08!39;UBERON:0006240!8.08e-08!39;UBERON:0002020!1.23e-07!34;UBERON:0002616!1.42e-07!49;UBERON:0007100!3.57e-07!18;UBERON:0000948!3.57e-07!18;UBERON:0005498!3.57e-07!18;UBERON:0004140!3.57e-07!18;UBERON:0009881!3.57e-07!18;UBERON:0004141!3.57e-07!18;UBERON:0003084!3.57e-07!18;UBERON:0007005!3.57e-07!18;UBERON:0004139!3.57e-07!18;UBERON:0004291!3.57e-07!18;UBERON:0002410!4.46e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.62e-17,92;UBERON:0001017,5.72e-16,73;UBERON:0001016,2.75e-15,75;UBERON:0002346,6.13e-13,64;UBERON:0003075,6.13e-13,64;UBERON:0007284,6.13e-13,64;UBERON:0004121,9.07e-12,95;UBERON:0000924,9.07e-12,95;UBERON:0006601,9.07e-12,95;UBERON:0000073,4.73e-10,54;UBERON:0001049,1.50e-09,52;UBERON:0005068,1.50e-09,52;UBERON:0006241,1.50e-09,52;UBERON:0007135,1.50e-09,52;UBERON:0003056,2.38e-09,49;UBERON:0010371,9.68e-09,73;UBERON:0003080,6.80e-08,40;UBERON:0002780,7.51e-08,39;UBERON:0001890,7.51e-08,39;UBERON:0006240,7.51e-08,39;UBERON:0002410,1.18e-07,9;UBERON:0002020,1.28e-07,34;UBERON:0000955,1.31e-07,47;UBERON:0006238,1.31e-07,47;UBERON:0007100,1.54e-07,18;UBERON:0000948,1.54e-07,18;UBERON:0005498,1.54e-07,18;UBERON:0004140,1.54e-07,18;UBERON:0009881,1.54e-07,18;UBERON:0004141,1.54e-07,18;UBERON:0003084,1.54e-07,18;UBERON:0007005,1.54e-07,18;UBERON:0004139,1.54e-07,18;UBERON:0004291,1.54e-07,18;UBERON:0002616,3.54e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,17.317012824655,12.1713553687437,3.4243593645101,4.70655738072485,6.67682846731702,6.11942816932982,0,0.202475267389826,0,1.57731082679119,1.09691546884591,0.84877930359606,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0.194429899074283,0.979904951377538,0,1.00669563634642,3.62681071005672,10.4189077734164,0,0.573066879877513,0.515672092277442,22.659443616275,24.3335850465135,27.2547503507657,0.338844532069132,0,0.449949858640699,0.988866362566974,0,2.69640099466564,1.53687322128622,13.9980976616445,13.5005938331691,16.4053469854078,16.5677570954206,15.0190607847097,26.9479758272899,24.9198224647415,20.2228133054205,3.30347642998166,6.2566795661742,5.22262213071228,34.686093673041,36.2291068665542,26.5665818983948,2.23346399201105,2.8138130501584,4.73674568108111,19.1508580557884,20.0744069926735,29.6375118862228,0.454357159999104,1.36028808192214,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.91347103775248,8.02707439306232,1.48442139064825,3.64319186208885,1.52232739156071,0.922461989024234,1.80867168663147,1.29347577849275,0.125666591329675,0,0.289198713839823,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,1.86391761218122,3.22058876712702,4.60782754989601,2.29911349687732,0.838705871541442,0.599902730993408,0.381210681219194,2.84602214869163,1.83000241127451,26.1361052394758,3.30266208365325,3.3243009452943,5.61027720310812,5.353961681236,1.12023300235348,1.24406970610093,0.252722758433675,1.89397670297827,2.34216797332867,2.98872735763515,7.20248519221397,7.38453607395004,8.36848939561333,6.14945857367279,5.15359485078509,1.81092359517311,0.431135985865684,2.26927296201383,3.51902248327898,1.7535658594206,0.834141747676794,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0.284163499395593,16.9843133479112,13.1334593589414,13.5046546095761,15.8618972842091,21.2505370287196,20.3632589011339,21.8581908065383,21.7301455133692,31.7601731238701,34.5575684818309,36.28100956148,39.31837262974,34.6493970198038,19.3204101456125,31.9411276649685,6.09840850835969,14.818264182617,0,2.11560453330835,6.61193576659225,13.9342003116263,11.2114691350221,8.67239155880373,9.33987784148455,12.3646656973163,6.64340686162316,8.89374355509659,11.3100843960121,11.7384318504279,9.55324026883689,3.59527763461689,3.6743468478698,3.38540164532424,0.189667900953082,0.685491075658373,0,1.01825663922657,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,2.65287976478679,0.488894929326078,1.35796068620151,1.17345124144251,0.502518772325447,0.714130922658041,0.195133647857799,1.10344600874334,0.221464689648775,0.159454768657487,0.655453258862952,0.690739927463582,0.289298117163023,0,0.54390568381871,0.983528546038072,0.551873492609465,2.72936002979246,1.75817529888305,0,0.504941854408746,66.2567260774139,58.9562503887924,83.3688549225932,11.2315335037699,19.8290819933331,23.4953520554731,65.174522969658,93.5218745316198,104.355973377882,17.0300297703558,0.99358059645788,1.06839362200353,0.977321756121456,0.494910368917606,0,1.21390318077491,1.81394134178851,1.32023555829129,1.47650946440386,1.53717573971964,3.87642439752332,1.09060118843252,3.20847640546249,3.16036757935816,1.05418608574999,0,2.04263763452273,9.18311579559682,12.9358683782754,16.5039516974326,8.15765074754458,8.20496560969525,6.41741180348272,2.43571959291679,0.469343416127421,0,0.220528398054962,0.8244312647074,0.807322133479528,0.301564624640779,0.358117032009409,0.820704498725306,7.57850175237612,3.15223013417866,0.683483523191411,2.47664241555867,1.11116716421827,0.188368457004691,0.410082683163076,0.915112692826091,1.01987057996313,0.979660166265606,1.52019971184866,0,4.27053591334533,8.74273708645449,9.61247533314031,7.73626695253534,8.07941485860857,5.93403124093211,5.12451425497083,1.83229159388821,2.07383957266869,0.621339313086926,0,0,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.469428954583016,0.2604087696879,0,0.483168241652012,0,1.58005560314089,2.43270258348197,0.616265742988964,0.77952493786677,0.537080087002444,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.685861259894999,0.403304740547362,0.877120926657772,0.673482891482306,1.5193997283604,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.643105137237198,0,3.95326289831947,2.76195141904306,3.43737308063638,3.43706364687375,1.37016503954128,1.5107877947794,1.35004500046361,2.2516060161211,0.906284817968409,1.55328093525546,2.90604573235695,3.99024873401031,7.68301225893604,4.37592090722929,7.33646069197938,5.33146174505041,7.11189528965169,6.38708677440572,7.06022261101994,6.31743029409494,4.30914809813408,6.60192194851267,7.21039607518095,5.37811280200902,6.43277252302869,8.09699275181225,5.91010062318763,5.59436739344745,7.00546031365621,4.56316652416632,4.80016953339582,4.43689515398344,5.00715998889374,4.79643174886684,5.64656282491984,7.36147088657586,7.13419094203813,4.20911538300549,6.11118512306378,5.05028044491965,4.38949567059444,5.81176446015824,4.50154147486658,4.80304207676495,4.05103883060397,7.74412791607632,3.74290573512653,4.08255002691767,2.10417165275728,2.20591419119516,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,1.16210991097419,17.317012824655,12.1713553687437,3.4243593645101,4.70655738072485,6.67682846731702,6.11942816932982,0,0.202475267389826,0,1.57731082679119,1.09691546884591,0.84877930359606,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,0.194429899074283,0.979904951377538,0,1.00669563634642,3.62681071005672,10.4189077734164,0,0.573066879877513,0.515672092277442,22.659443616275,24.3335850465135,27.2547503507657,0.338844532069132,0,0.449949858640699,0.988866362566974,0,2.69640099466564,1.53687322128622,13.9980976616445,13.5005938331691,16.4053469854078,16.5677570954206,15.0190607847097,26.9479758272899,24.9198224647415,20.2228133054205,3.30347642998166,6.2566795661742,5.22262213071228,34.686093673041,36.2291068665542,26.5665818983948,2.23346399201105,2.8138130501584,4.73674568108111,19.1508580557884,20.0744069926735,29.6375118862228,0.454357159999104,1.36028808192214,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.91347103775248,8.02707439306232,1.48442139064825,3.64319186208885,1.52232739156071,0.922461989024234,1.80867168663147,1.29347577849275,0.125666591329675,0,0.289198713839823,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,1.86391761218122,3.22058876712702,4.60782754989601,2.29911349687732,0.838705871541442,0.599902730993408,0.381210681219194,2.84602214869163,1.83000241127451,26.1361052394758,3.30266208365325,3.3243009452943,5.61027720310812,5.353961681236,1.12023300235348,1.24406970610093,0.252722758433675,1.89397670297827,2.34216797332867,2.98872735763515,7.20248519221397,7.38453607395004,8.36848939561333,6.14945857367279,5.15359485078509,1.81092359517311,0.431135985865684,2.26927296201383,3.51902248327898,1.7535658594206,0.834141747676794,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0.284163499395593,16.9843133479112,13.1334593589414,13.5046546095761,15.8618972842091,21.2505370287196,20.3632589011339,21.8581908065383,21.7301455133692,31.7601731238701,34.5575684818309,36.28100956148,39.31837262974,34.6493970198038,19.3204101456125,31.9411276649685,6.09840850835969,14.818264182617,0,2.11560453330835,6.61193576659225,13.9342003116263,11.2114691350221,8.67239155880373,9.33987784148455,12.3646656973163,6.64340686162316,8.89374355509659,11.3100843960121,11.7384318504279,9.55324026883689,3.59527763461689,3.6743468478698,3.38540164532424,0.189667900953082,0.685491075658373,0,1.01825663922657,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,2.65287976478679,0.488894929326078,1.35796068620151,1.17345124144251,0.502518772325447,0.714130922658041,0.195133647857799,1.10344600874334,0.221464689648775,0.159454768657487,0.655453258862952,0.690739927463582,0.289298117163023,0,0.54390568381871,0.983528546038072,0.551873492609465,2.72936002979246,1.75817529888305,0,0.504941854408746,66.2567260774139,58.9562503887924,83.3688549225932,11.2315335037699,19.8290819933331,23.4953520554731,65.174522969658,93.5218745316198,104.355973377882,17.0300297703558,0.99358059645788,1.06839362200353,0.977321756121456,0.494910368917606,0,1.21390318077491,1.81394134178851,1.32023555829129,1.47650946440386,1.53717573971964,3.87642439752332,1.09060118843252,3.20847640546249,3.16036757935816,1.05418608574999,0,2.04263763452273,9.18311579559682,12.9358683782754,16.5039516974326,8.15765074754458,8.20496560969525,6.41741180348272,2.43571959291679,0.469343416127421,0,0.220528398054962,0.8244312647074,0.807322133479528,0.301564624640779,0.358117032009409,0.820704498725306,7.57850175237612,3.15223013417866,0.683483523191411,2.47664241555867,1.11116716421827,0.188368457004691,0.410082683163076,0.915112692826091,1.01987057996313,0.979660166265606,1.52019971184866,0,4.27053591334533,8.74273708645449,9.61247533314031,7.73626695253534,8.07941485860857,5.93403124093211,5.12451425497083,1.83229159388821,2.07383957266869,0.621339313086926,0,0,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.469428954583016,0.2604087696879,0,0.483168241652012,0,1.58005560314089,2.43270258348197,0.616265742988964,0.77952493786677,0.537080087002444,0.993406773906324,0.360586348559907,0.590758108698309,0.504832249740738,0.685861259894999,0.403304740547362,0.877120926657772,0.673482891482306,1.5193997283604,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.643105137237198,0,3.95326289831947,2.76195141904306,3.43737308063638,3.43706364687375,1.37016503954128,1.5107877947794,1.35004500046361,2.2516060161211,0.906284817968409,1.55328093525546,2.90604573235695,3.99024873401031,7.68301225893604,4.37592090722929,7.33646069197938,5.33146174505041,7.11189528965169,6.38708677440572,7.06022261101994,6.31743029409494,4.30914809813408,6.60192194851267,7.21039607518095,5.37811280200902,6.43277252302869,8.09699275181225,5.91010062318763,5.59436739344745,7.00546031365621,4.56316652416632,4.80016953339582,4.43689515398344,5.00715998889374,4.79643174886684,5.64656282491984,7.36147088657586,7.13419094203813,4.20911538300549,6.11118512306378,5.05028044491965,4.38949567059444,5.81176446015824,4.50154147486658,4.80304207676495,4.05103883060397,7.74412791607632,3.74290573512653,4.08255002691767,2.10417165275728,2.20591419119516,0.927471342481686 | ||
|short_description=p2@Fgf13 | |short_description=p2@Fgf13 | ||
}} | }} |
Latest revision as of 22:28, 1 October 2015
Short description: | p2@Fgf13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fgf13_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 0bp_to_ENSMUST00000119833, ENSMUST00000131319_5end |
EntrezGene: | Fgf13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.32e-17 | 33 |
neuronal stem cell | 7.32e-17 | 33 |
neuroblast | 7.32e-17 | 33 |
electrically signaling cell | 7.32e-17 | 33 |
electrically responsive cell | 1.15e-11 | 39 |
electrically active cell | 1.15e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.29e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-11 | 23 |
neural cell | 1.03e-10 | 43 |
ectodermal cell | 4.17e-10 | 44 |
neurectodermal cell | 4.17e-10 | 44 |
autonomic neuron | 1.18e-07 | 9 |