FFCP PHASE1:Mm9::chr3:31209140..31209153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241919 | |EntrezGene=241919 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=278 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BXR1 | |UniProt=Q8BXR1 | ||
|association_with_transcript=87bp_to_NM_172861,uc008ovx.2_5end | |association_with_transcript=87bp_to_NM_172861,uc008ovx.2_5end | ||
|cluster_id=chr3:31209140..31209153,- | |||
|description=CAGE_peak_4_at_Slc7a14_5end | |description=CAGE_peak_4_at_Slc7a14_5end | ||
|id=chr3:31209140..31209153,- | |id=chr3:31209140..31209153,- | ||
|ontology_enrichment_celltype=CL:0000540!3.25e-10!33;CL:0000047!3.25e-10!33;CL:0000031!3.25e-10!33;CL:0000404!3.25e-10!33;CL:0000221!8.71e-08!44;CL:0000133!8.71e-08!44;CL:0002319!2.33e-07!43;CL:0000393!2.45e-07!39;CL:0000211!2.45e-07!39 | |ontology_enrichment_celltype=CL:0000540!3.25e-10!33;CL:0000047!3.25e-10!33;CL:0000031!3.25e-10!33;CL:0000404!3.25e-10!33;CL:0000221!8.71e-08!44;CL:0000133!8.71e-08!44;CL:0002319!2.33e-07!43;CL:0000393!2.45e-07!39;CL:0000211!2.45e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.33e-09,33;CL:0000047,1.33e-09,33;CL:0000031,1.33e-09,33;CL:0000404,1.33e-09,33;CL:0002614,2.84e-08,3;CL:0000393,1.06e-07,39;CL:0000211,1.06e-07,39;CL:0000117,8.36e-07,23;CL:0000337,8.36e-07,23;CL:0002319,9.76e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.44e-18!102;UBERON:0000924!2.44e-18!102;UBERON:0006601!2.44e-18!102;UBERON:0000073!3.84e-18!75;UBERON:0001016!3.84e-18!75;UBERON:0002346!5.99e-18!71;UBERON:0003075!5.99e-18!71;UBERON:0007284!5.99e-18!71;UBERON:0001017!3.86e-17!73;UBERON:0005743!3.86e-17!73;UBERON:0001049!2.17e-12!52;UBERON:0005068!2.17e-12!52;UBERON:0006241!2.17e-12!52;UBERON:0007135!2.17e-12!52;UBERON:0000955!8.08e-10!50;UBERON:0006238!8.08e-10!50;UBERON:0002616!1.71e-09!49;UBERON:0000033!1.85e-09!63;UBERON:0002342!1.02e-08!10;UBERON:0005062!1.02e-08!10;UBERON:0002020!5.01e-08!34;UBERON:0003080!2.59e-07!40;UBERON:0003076!7.51e-07!12;UBERON:0003057!7.51e-07!12;UBERON:0002298!8.19e-07!6;UBERON:0003056!9.06e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.61e-17,73;UBERON:0001016,1.10e-16,75;UBERON:0010314,1.29e-12,92;UBERON:0000073,2.64e-12,54;UBERON:0004121,6.64e-12,95;UBERON:0000924,6.64e-12,95;UBERON:0006601,6.64e-12,95;UBERON:0002369,9.09e-12,7;UBERON:0006858,9.09e-12,7;UBERON:0001049,1.03e-11,52;UBERON:0005068,1.03e-11,52;UBERON:0006241,1.03e-11,52;UBERON:0007135,1.03e-11,52;UBERON:0002950,1.62e-10,4;UBERON:0001891,1.62e-10,4;UBERON:0009616,1.62e-10,4;UBERON:0010286,1.62e-10,4;UBERON:0002346,4.93e-10,64;UBERON:0003075,4.93e-10,64;UBERON:0007284,4.93e-10,64;UBERON:0010371,2.62e-09,73;UBERON:0002616,4.80e-09,46;UBERON:0000955,8.83e-09,47;UBERON:0006238,8.83e-09,47;UBERON:0002038,2.84e-08,3;UBERON:0009663,2.84e-08,3;UBERON:0009661,2.84e-08,3;UBERON:0000125,2.84e-08,3;UBERON:0002308,2.84e-08,3;UBERON:0003076,3.11e-07,12;UBERON:0003057,3.11e-07,12 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,2.85650984403804,1.32521124570968,0,0.191690942036473,0,0,1.40456071893706,1.38245879930619,0.527545150920775,0.0914876436024097,0,1.95428099300967,2.8138130501584,1.68078072554491,0.883885756421003,0.996601765593721,0.931997229126503,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,1.7813056687779,1.38788261412909,1.21786191324856,1.84492397804847,2.11011696773672,1.76383060703557,0.502666365318702,0,0,0,0,0,0,1.86391761218122,1.75668478206928,0.41889341362691,0,0,0,0,2.09706895166752,3.20250421973039,0.502617408451458,1.91206752211504,1.53429274398198,1.24672826735736,0.811206315338788,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,3.57492912559016,0.205809224758569,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.380451252225118,0,0,0,0.397912944082302,0.974820435595601,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.34423373184406,0,0,0.631016438832513,0.780877488593277,3.87762115919038,0,0.222798674082394,0.566153061577665,0.404810701674894,2.63030272120181,1.58115111178609,0.321321316421807,0,0,0,0,0,1.21390318077491,0.302323556964751,0.377210159511796,0.885905678642318,1.22974059177571,0.258428293168221,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,2.7235168460303,0,0,0,0,0.356737635204141,0.822745103010605,1.522324745573,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,4.26478194624172,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,2.2661816921691,0,0.45032120322422,1.35942722695261,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0,0.25384382367503,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,2.85650984403804,1.32521124570968,0,0.191690942036473,0,0,1.40456071893706,1.38245879930619,0.527545150920775,0.0914876436024097,0,1.95428099300967,2.8138130501584,1.68078072554491,0.883885756421003,0.996601765593721,0.931997229126503,0.454357159999104,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,1.7813056687779,1.38788261412909,1.21786191324856,1.84492397804847,2.11011696773672,1.76383060703557,0.502666365318702,0,0,0,0,0,0,1.86391761218122,1.75668478206928,0.41889341362691,0,0,0,0,2.09706895166752,3.20250421973039,0.502617408451458,1.91206752211504,1.53429274398198,1.24672826735736,0.811206315338788,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,3.57492912559016,0.205809224758569,0,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0,0.380451252225118,0,0,0,0.397912944082302,0.974820435595601,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.34423373184406,0,0,0.631016438832513,0.780877488593277,3.87762115919038,0,0.222798674082394,0.566153061577665,0.404810701674894,2.63030272120181,1.58115111178609,0.321321316421807,0,0,0,0,0,1.21390318077491,0.302323556964751,0.377210159511796,0.885905678642318,1.22974059177571,0.258428293168221,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,0,2.7235168460303,0,0,0,0,0.356737635204141,0.822745103010605,1.522324745573,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,4.26478194624172,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,2.2661816921691,0,0.45032120322422,1.35942722695261,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0,0.25384382367503,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p4@Slc7a14 | |short_description=p4@Slc7a14 | ||
}} | }} |
Latest revision as of 22:33, 1 October 2015
Short description: | p4@Slc7a14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc7a14_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 87bp_to_NM_172861, uc008ovx.2_5end |
EntrezGene: | Slc7a14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.33e-09 | 33 |
neuronal stem cell | 1.33e-09 | 33 |
neuroblast | 1.33e-09 | 33 |
electrically signaling cell | 1.33e-09 | 33 |
neuron of the substantia nigra | 2.84e-08 | 3 |
electrically responsive cell | 1.06e-07 | 39 |
electrically active cell | 1.06e-07 | 39 |
CNS neuron (sensu Vertebrata) | 8.36e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.36e-07 | 23 |
neural cell | 9.76e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.61e-17 | 73 |
nervous system | 1.10e-16 | 75 |
structure with developmental contribution from neural crest | 1.29e-12 | 92 |
regional part of nervous system | 2.64e-12 | 54 |
ectoderm-derived structure | 6.64e-12 | 95 |
ectoderm | 6.64e-12 | 95 |
presumptive ectoderm | 6.64e-12 | 95 |
adrenal gland | 9.09e-12 | 7 |
adrenal/interrenal gland | 9.09e-12 | 7 |
neural tube | 1.03e-11 | 52 |
neural rod | 1.03e-11 | 52 |
future spinal cord | 1.03e-11 | 52 |
neural keel | 1.03e-11 | 52 |
regional part of midbrain | 1.62e-10 | 4 |
midbrain | 1.62e-10 | 4 |
presumptive midbrain | 1.62e-10 | 4 |
midbrain neural tube | 1.62e-10 | 4 |
neurectoderm | 4.93e-10 | 64 |
neural plate | 4.93e-10 | 64 |
presumptive neural plate | 4.93e-10 | 64 |
ecto-epithelium | 2.62e-09 | 73 |
regional part of brain | 4.80e-09 | 46 |
brain | 8.83e-09 | 47 |
future brain | 8.83e-09 | 47 |
substantia nigra | 2.84e-08 | 3 |
telencephalic nucleus | 2.84e-08 | 3 |
midbrain nucleus | 2.84e-08 | 3 |
neural nucleus | 2.84e-08 | 3 |
nucleus of brain | 2.84e-08 | 3 |
posterior neural tube | 3.11e-07 | 12 |
chordal neural plate | 3.11e-07 | 12 |