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FFCP PHASE1:Mm9::chr2:11094015..11094046,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18761
|EntrezGene=18761
|HGNC=
|HGNC=
|MCL_coexpression_id=40
|TSSclassifier=NA
|UniProt=Q02111,A6H667,B1AYX8,Q8CAV6
|UniProt=Q02111,A6H667,B1AYX8,Q8CAV6
|association_with_transcript=6bp_to_ENSMUST00000028118,NM_008859,uc008iia.1,uc008iib.1,uc008iic.1_5end
|association_with_transcript=6bp_to_ENSMUST00000028118,NM_008859,uc008iia.1,uc008iib.1,uc008iic.1_5end
|cluster_id=chr2:11094015..11094046,+
|description=CAGE_peak_2_at_Prkcq_5end
|description=CAGE_peak_2_at_Prkcq_5end
|id=chr2:11094015..11094046,+
|id=chr2:11094015..11094046,+
|ontology_enrichment_celltype=CL:0000791!2.51e-07!9;CL:0000789!2.51e-07!9;CL:0002420!2.51e-07!9;CL:0002419!2.51e-07!9;CL:0000790!2.51e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,2.16e-08,9;CL:0000789,2.16e-08,9;CL:0002420,2.16e-08,9;CL:0002419,2.16e-08,9;CL:0000790,2.16e-08,9;CL:0000624,1.33e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.08e-10!29;UBERON:0006562!4.94e-10!24;UBERON:0001557!4.94e-10!24;UBERON:0001042!4.94e-10!24;UBERON:0008814!4.94e-10!24;UBERON:0009145!4.94e-10!24;UBERON:0002370!2.28e-09!23;UBERON:0000974!2.28e-09!23;UBERON:0004807!2.28e-09!23;UBERON:0005058!2.28e-09!23;UBERON:0003351!2.28e-09!23;UBERON:0009113!2.28e-09!23;UBERON:0003295!2.28e-09!23;UBERON:0009722!2.28e-09!23;UBERON:0005562!2.28e-09!23;UBERON:0007690!2.28e-09!23;UBERON:0003408!5.31e-09!24;UBERON:0000072!2.83e-07!27;UBERON:0007811!5.68e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.25e-13,29;UBERON:0005057,7.25e-13,29;UBERON:0007811,7.69e-13,36;UBERON:0006562,1.05e-12,24;UBERON:0001557,1.05e-12,24;UBERON:0001042,1.05e-12,24;UBERON:0008814,1.05e-12,24;UBERON:0009145,1.05e-12,24;UBERON:0002370,6.70e-12,23;UBERON:0000974,6.70e-12,23;UBERON:0004807,6.70e-12,23;UBERON:0005058,6.70e-12,23;UBERON:0003351,6.70e-12,23;UBERON:0009113,6.70e-12,23;UBERON:0003295,6.70e-12,23;UBERON:0009722,6.70e-12,23;UBERON:0005562,6.70e-12,23;UBERON:0007690,6.70e-12,23;UBERON:0000077,2.86e-11,35;UBERON:0003408,5.49e-11,24;UBERON:0000153,2.74e-10,43;UBERON:0000072,3.93e-10,27;UBERON:0000065,2.24e-08,41;UBERON:0001004,6.64e-08,42;UBERON:0002390,3.15e-07,45;UBERON:0003061,3.15e-07,45;UBERON:0002193,6.10e-07,48;UBERON:0002405,6.10e-07,48
|phase1_expression=2.24208385946712,0,0,0,0,0,0,42.2233267653954,11.9670413828917,19.6614202110475,11.1291679346578,11.1681022593471,64.0290729942709,48.4309029401246,0.999329285446988,2.42970320867791,0.699561878128147,5.52058789376916,4.79900517620086,5.09267582157636,1.44573593256819,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777719596297134,0.55994568650145,2.87505128729943,0,37.7188313845899,31.9289109185341,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,2.28520787523043,2.42955395046775,0,0.0958454710182364,0,2.20231761998777,3.19218345212969,3.5329502648936,0.131886287730194,0.182975287204819,0,2.51264699101243,1.12552522006336,3.0559649555362,2.65165726926301,3.41692033917847,0.559198337475902,0.605809546665472,2.72057616384428,4.34796733052517,0.860423876981386,0.679971333707751,0,0,0,18.117330196996,0,0,0,6.33795388995062,0,0,0,0,0,0,2.74041311325744,13.9826457169473,0.890652834388949,0,0.608930956624282,0.461230994512117,0.60289056221049,0.587943535678524,0.125666591329675,0,1.3013942122792,15.0383793831479,9.86777784679196,16.1214308476087,10.1823803158397,0,1.75668478206928,3.35114730901528,0.766371165625774,1.67741174308288,0,0.508280908292259,5.39246301857362,5.49000723382352,0.125654352112864,2.43354048269187,1.53429274398198,7.06479351502504,5.67844420737152,0.611036183101898,7.34001126599549,0.252722758433675,6.94458124425364,1.82168620147785,0.689706313300419,1.80062129805349,2.10986744970001,2.10913147369116,2.43416068541215,1.59292931751539,8.01980449290949,0.215567992932842,0.378212160335639,0,0.657587197282725,1.39023624612799,2.089512999133,1.23469281844766,0.398068533636986,0,0.51469581422943,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.787056926989615,0.462801338662135,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.729619285912702,0.877199924551994,0.219550115291051,0.671032093801859,5.04695876553905,0.514523061896422,0,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0.949058123089023,0.329397909448022,0,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.799739588268102,1.1270773567308,1.83286195060783,1.93952487167626,2.59502533594179,4.86921335856781,6.6424566590821,5.02395929092399,2.96153193412321,0.296452627087149,1.50160595144485,0.786235980452812,1.12431056192427,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.972811360650212,0,4.31304619582064,1.11642284300551,1.87222603868736,0.505157755894224,1.79397413521912,0,5.17308932466493,0,0,0.339490171550376,0.234690248288502,1.00503754465089,0.952174563544055,0.585400943573396,2.99506773801763,1.7717175171902,2.39182152986231,3.93271955317771,4.31712454664739,3.90552458170081,0,0,1.96705709207614,1.65562047782839,5.77982123956051,10.6662634798905,0,53.0188947129183,1.26203287766503,1.17131623288992,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,0,1.16902343164525,0.395287777946524,2.24924921495265,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,0,0,5.10659408630682,0.900305470156551,0,0,0.354680467284547,0.535106452806212,0.164549020602121,0.608929898229199,1.40803024838226,0,0.882113592219848,7.74965388824956,2.42196640043858,2.29189114726992,2.26807453605959,2.62625439592098,0.874442509889552,7.97328798645192,3.58828849675491,1.03193433981611,2.03713980106683,2.63715839806567,3.8274383761887,4.57556346413045,4.07948231985253,6.57771825921193,5.2515990045681,0,0.474503990371703,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.578574190077352,1.04702376793612,0.777689839750757,0.621339313086926,0,0,0,0.194451188344048,0.516639293910924,0.168956125490778,0.117357238645754,0,0.209718688851422,0,5.18454011264158,24.3328562883697,5.47358081283443,5.95723551555998,7.14564526377873,9.667441566044,10.1327490938445,10.5771995577573,11.0767145380933,10.9043765943999,10.21171209177,13.4098826231998,17.2500448909362,16.5484367621367,17.88216603378,61.2172035761071,0,0,0,3.86379188064381,1.12609485270709,1.09890974560359,0.643105137237198,0,2.82375921308533,1.38097570952153,2.86447756719698,1.89038500578056,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,1.81256963593682,2.07104124700728,0.207574695168353,0.399024873401031,0.682934423016537,0.729320151204882,0.419226325255965,1.47074806760011,5.33392146723877,3.7086310303001,3.53011130550997,4.04315538822076,3.54871019846336,2.82939512079114,2.99652823903624,3.58540853467268,2.12511235135769,3.81034953026459,3.01299247456624,2.50781986602817,2.47251540481984,4.71036544430071,3.77156177623957,3.54951612318675,3.81497903915713,4.65108533223451,3.57615645578256,3.46919892355874,4.20734337607377,2.89376682581627,3.66671107383827,4.48913817326191,4.03359061622192,3.25064791839359,4.09231043169689,3.09873682371932,2.89359916471712,1.99848462350357,4.91256377735358,2.79332370262788,9.37312827137333,9.26483960301965,16.9263520002908
|phase1_expression=2.24208385946712,0,0,0,0,0,0,42.2233267653954,11.9670413828917,19.6614202110475,11.1291679346578,11.1681022593471,64.0290729942709,48.4309029401246,0.999329285446988,2.42970320867791,0.699561878128147,5.52058789376916,4.79900517620086,5.09267582157636,1.44573593256819,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777719596297134,0.55994568650145,2.87505128729943,0,37.7188313845899,31.9289109185341,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,2.28520787523043,2.42955395046775,0,0.0958454710182364,0,2.20231761998777,3.19218345212969,3.5329502648936,0.131886287730194,0.182975287204819,0,2.51264699101243,1.12552522006336,3.0559649555362,2.65165726926301,3.41692033917847,0.559198337475902,0.605809546665472,2.72057616384428,4.34796733052517,0.860423876981386,0.679971333707751,0,0,0,18.117330196996,0,0,0,6.33795388995062,0,0,0,0,0,0,2.74041311325744,13.9826457169473,0.890652834388949,0,0.608930956624282,0.461230994512117,0.60289056221049,0.587943535678524,0.125666591329675,0,1.3013942122792,15.0383793831479,9.86777784679196,16.1214308476087,10.1823803158397,0,1.75668478206928,3.35114730901528,0.766371165625774,1.67741174308288,0,0.508280908292259,5.39246301857362,5.49000723382352,0.125654352112864,2.43354048269187,1.53429274398198,7.06479351502504,5.67844420737152,0.611036183101898,7.34001126599549,0.252722758433675,6.94458124425364,1.82168620147785,0.689706313300419,1.80062129805349,2.10986744970001,2.10913147369116,2.43416068541215,1.59292931751539,8.01980449290949,0.215567992932842,0.378212160335639,0,0.657587197282725,1.39023624612799,2.089512999133,1.23469281844766,0.398068533636986,0,0.51469581422943,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.787056926989615,0.462801338662135,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.729619285912702,0.877199924551994,0.219550115291051,0.671032093801859,5.04695876553905,0.514523061896422,0,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0.949058123089023,0.329397909448022,0,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.799739588268102,1.1270773567308,1.83286195060783,1.93952487167626,2.59502533594179,4.86921335856781,6.6424566590821,5.02395929092399,2.96153193412321,0.296452627087149,1.50160595144485,0.786235980452812,1.12431056192427,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.972811360650212,0,4.31304619582064,1.11642284300551,1.87222603868736,0.505157755894224,1.79397413521912,0,5.17308932466493,0,0,0.339490171550376,0.234690248288502,1.00503754465089,0.952174563544055,0.585400943573396,2.99506773801763,1.7717175171902,2.39182152986231,3.93271955317771,4.31712454664739,3.90552458170081,0,0,1.96705709207614,1.65562047782839,5.77982123956051,10.6662634798905,0,53.0188947129183,1.26203287766503,1.17131623288992,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,0,1.16902343164525,0.395287777946524,2.24924921495265,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,0,0,5.10659408630682,0.900305470156551,0,0,0.354680467284547,0.535106452806212,0.164549020602121,0.608929898229199,1.40803024838226,0,0.882113592219848,7.74965388824956,2.42196640043858,2.29189114726992,2.26807453605959,2.62625439592098,0.874442509889552,7.97328798645192,3.58828849675491,1.03193433981611,2.03713980106683,2.63715839806567,3.8274383761887,4.57556346413045,4.07948231985253,6.57771825921193,5.2515990045681,0,0.474503990371703,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.578574190077352,1.04702376793612,0.777689839750757,0.621339313086926,0,0,0,0.194451188344048,0.516639293910924,0.168956125490778,0.117357238645754,0,0.209718688851422,0,5.18454011264158,24.3328562883697,5.47358081283443,5.95723551555998,7.14564526377873,9.667441566044,10.1327490938445,10.5771995577573,11.0767145380933,10.9043765943999,10.21171209177,13.4098826231998,17.2500448909362,16.5484367621367,17.88216603378,61.2172035761071,0,0,0,3.86379188064381,1.12609485270709,1.09890974560359,0.643105137237198,0,2.82375921308533,1.38097570952153,2.86447756719698,1.89038500578056,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,1.81256963593682,2.07104124700728,0.207574695168353,0.399024873401031,0.682934423016537,0.729320151204882,0.419226325255965,1.47074806760011,5.33392146723877,3.7086310303001,3.53011130550997,4.04315538822076,3.54871019846336,2.82939512079114,2.99652823903624,3.58540853467268,2.12511235135769,3.81034953026459,3.01299247456624,2.50781986602817,2.47251540481984,4.71036544430071,3.77156177623957,3.54951612318675,3.81497903915713,4.65108533223451,3.57615645578256,3.46919892355874,4.20734337607377,2.89376682581627,3.66671107383827,4.48913817326191,4.03359061622192,3.25064791839359,4.09231043169689,3.09873682371932,2.89359916471712,1.99848462350357,4.91256377735358,2.79332370262788,9.37312827137333,9.26483960301965,16.9263520002908
|short_description=p2@Prkcq
|short_description=p2@Prkcq
}}
}}

Latest revision as of 23:03, 1 October 2015

Short description:p2@Prkcq
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prkcq_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: 6bp_to_ENSMUST00000028118, NM_008859, uc008iia.1, uc008iib.1, uc008iic.1_5end
EntrezGene:Prkcq
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prkcq

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E942.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E464.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E848.43
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I937.72
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.93
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H913.98
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F59.87
bone (os femoris), neonate N16.CNhs11225.1525-43A616.12
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D54.87
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C253.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.25
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B524.33
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I25.96
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F810.58
thymus, neonate N03.CNhs11137.2104-43C711.08
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D310.21
thymus, neonate N10.CNhs11194.748-24E413.41
thymus, neonate N20.CNhs11186.820-7A217.25
thymus, neonate N25.CNhs11125.1362-25G716.55
thymus, neonate N30.CNhs11132.1393-42G217.88
tongue, adult.CNhs10499.32-1B461.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D19.26
whole body, neonate N10.CNhs10518.761-6B416.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.16e-089
alpha-beta T cell2.16e-089
immature T cell2.16e-089
mature T cell2.16e-089
immature alpha-beta T cell2.16e-089
CD4-positive, alpha-beta T cell1.33e-078

Uber anatomy
Ontology termp-valuen
hemopoietic organ7.25e-1329
immune organ7.25e-1329
craniocervical region7.69e-1336
pharynx1.05e-1224
upper respiratory tract1.05e-1224
chordate pharynx1.05e-1224
pharyngeal arch system1.05e-1224
pharyngeal region of foregut1.05e-1224
thymus6.70e-1223
neck6.70e-1223
respiratory system epithelium6.70e-1223
hemolymphoid system gland6.70e-1223
pharyngeal epithelium6.70e-1223
thymic region6.70e-1223
pharyngeal gland6.70e-1223
entire pharyngeal arch endoderm6.70e-1223
thymus primordium6.70e-1223
early pharyngeal endoderm6.70e-1223
mixed endoderm/mesoderm-derived structure2.86e-1135
gland of gut5.49e-1124
anterior region of body2.74e-1043
segment of respiratory tract3.93e-1027
respiratory tract2.24e-0841
respiratory system6.64e-0842
hematopoietic system3.15e-0745
blood island3.15e-0745
hemolymphoid system6.10e-0748
immune system6.10e-0748
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